BLASTX nr result

ID: Coptis25_contig00017191 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00017191
         (213 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tpg|DAA37406.1| TPA: pathogeneis protein2 [Zea mays]                   72   6e-11
gb|ACG32526.1| major latex protein 22 [Zea mays]                       72   6e-11
gb|ABF81693.1| pathogenesis-related protein 2 [Zea mays] gi|1956...    72   6e-11
ref|NP_001105279.1| Bet v I allergen [Zea mays] gi|54111527|gb|A...    71   1e-10
gb|ACJ11748.1| major latex-like protein [Gossypium hirsutum]           70   2e-10

>tpg|DAA37406.1| TPA: pathogeneis protein2 [Zea mays]
          Length = 98

 Score = 71.6 bits (174), Expect = 6e-11
 Identities = 33/70 (47%), Positives = 50/70 (71%), Gaps = 4/70 (5%)
 Frame = +3

Query: 6   YSVIDGEITHLYKSLKVHLHVVPK----EEGSLVKWGLEYEKASEQVPEPNDMKQIATKT 173
           YSV+DGE+   YK+ K+ L V P     E G++V W +E++KA++QVP+P+ +K+ ATKT
Sbjct: 28  YSVVDGELADFYKNFKITLKVTPAKAEGEGGAVVSWAMEFDKANDQVPDPDVIKETATKT 87

Query: 174 INCLDAYLLQ 203
            + LD YLL+
Sbjct: 88  FHDLDDYLLK 97


>gb|ACG32526.1| major latex protein 22 [Zea mays]
          Length = 171

 Score = 71.6 bits (174), Expect = 6e-11
 Identities = 33/70 (47%), Positives = 50/70 (71%), Gaps = 4/70 (5%)
 Frame = +3

Query: 6   YSVIDGEITHLYKSLKVHLHVVPK----EEGSLVKWGLEYEKASEQVPEPNDMKQIATKT 173
           YSV+DGE+   YK+ K+ L V P     E G++V W +E++KA++QVP+P+ +K+ ATKT
Sbjct: 101 YSVVDGELADFYKNFKITLKVTPAKAEGEGGAVVSWAMEFDKANDQVPDPDVIKETATKT 160

Query: 174 INCLDAYLLQ 203
            + LD YLL+
Sbjct: 161 FHDLDDYLLK 170


>gb|ABF81693.1| pathogenesis-related protein 2 [Zea mays]
           gi|195627034|gb|ACG35347.1| major latex protein 22 [Zea
           mays] gi|414586836|tpg|DAA37407.1| TPA: pathogeneis
           protein2 [Zea mays]
          Length = 154

 Score = 71.6 bits (174), Expect = 6e-11
 Identities = 33/70 (47%), Positives = 50/70 (71%), Gaps = 4/70 (5%)
 Frame = +3

Query: 6   YSVIDGEITHLYKSLKVHLHVVPK----EEGSLVKWGLEYEKASEQVPEPNDMKQIATKT 173
           YSV+DGE+   YK+ K+ L V P     E G++V W +E++KA++QVP+P+ +K+ ATKT
Sbjct: 84  YSVVDGELADFYKNFKITLKVTPAKAEGEGGAVVSWAMEFDKANDQVPDPDVIKETATKT 143

Query: 174 INCLDAYLLQ 203
            + LD YLL+
Sbjct: 144 FHDLDDYLLK 153


>ref|NP_001105279.1| Bet v I allergen [Zea mays] gi|54111527|gb|AAV28626.1| Bet v I
           allergen [Zea mays]
          Length = 154

 Score = 70.9 bits (172), Expect = 1e-10
 Identities = 33/70 (47%), Positives = 49/70 (70%), Gaps = 4/70 (5%)
 Frame = +3

Query: 6   YSVIDGEITHLYKSLKVHLHVVPK----EEGSLVKWGLEYEKASEQVPEPNDMKQIATKT 173
           YSV+DGE+   YK+ K+ L V P     E G++V W +E++KA++QVP+P+  K+ ATKT
Sbjct: 84  YSVVDGELADFYKNFKITLKVTPAKADGEGGAVVSWAMEFDKANDQVPDPDVTKETATKT 143

Query: 174 INCLDAYLLQ 203
            + LD YLL+
Sbjct: 144 FHDLDDYLLK 153


>gb|ACJ11748.1| major latex-like protein [Gossypium hirsutum]
          Length = 153

 Score = 70.1 bits (170), Expect = 2e-10
 Identities = 32/65 (49%), Positives = 45/65 (69%)
 Frame = +3

Query: 3   VYSVIDGEITHLYKSLKVHLHVVPKEEGSLVKWGLEYEKASEQVPEPNDMKQIATKTINC 182
           VYS+IDG++   YK+    + VVPK E SLVKW  E+EKASE++P+P+ +K+ A K    
Sbjct: 85  VYSIIDGDLLKYYKTFIGKIIVVPKGESSLVKWSCEFEKASEEIPDPSVIKEFAVKNFKE 144

Query: 183 LDAYL 197
           +D YL
Sbjct: 145 IDDYL 149


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