BLASTX nr result

ID: Coptis25_contig00017187 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00017187
         (539 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002279770.1| PREDICTED: uncharacterized protein LOC100241...   188   4e-46
ref|XP_002515216.1| conserved hypothetical protein [Ricinus comm...   184   6e-45
ref|XP_003535861.1| PREDICTED: uncharacterized protein LOC100816...   183   2e-44
gb|ACU23407.1| unknown [Glycine max]                                  183   2e-44
ref|XP_003519738.1| PREDICTED: uncharacterized protein LOC100790...   180   1e-43

>ref|XP_002279770.1| PREDICTED: uncharacterized protein LOC100241830 [Vitis vinifera]
           gi|297744037|emb|CBI37007.3| unnamed protein product
           [Vitis vinifera]
          Length = 228

 Score =  188 bits (478), Expect = 4e-46
 Identities = 97/166 (58%), Positives = 114/166 (68%), Gaps = 3/166 (1%)
 Frame = +1

Query: 49  TMSF-VSSPTPFVSLPHSKPVRNNNAVVLKLIPTCTTS--LRQPSLHKLXXXXXXXXXXX 219
           T SF VS+PT    L      R+  AVV   I +   S  LR  S+  +           
Sbjct: 4   TSSFSVSTPTYMTHLIRRSRSRSGGAVVFNAISSLRKSHCLRPQSMTDVFFRYPYGATKR 63

Query: 220 XXXXXXXXXXIRPFCPVMEWQDCSVRKEVDIPVSVAYDCYSDREAFPRWMPFISSVKILE 399
                      RPF PVMEWQDC+VR E+D+P+SVAY+CYSDR++ PRWMPFISSV++LE
Sbjct: 64  NSIFTST----RPFSPVMEWQDCTVRTEIDVPISVAYNCYSDRQSIPRWMPFISSVEVLE 119

Query: 400 DKPDLSRWTLKYKAFGRDIEFSWLARNMQPIPNQKIHWRSLEGLPN 537
           DKPDLS+W+LKY+AFGRDIEFSWLARNMQPIPNQKIHWRSLEGLPN
Sbjct: 120 DKPDLSKWSLKYEAFGRDIEFSWLARNMQPIPNQKIHWRSLEGLPN 165


>ref|XP_002515216.1| conserved hypothetical protein [Ricinus communis]
           gi|223545696|gb|EEF47200.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 269

 Score =  184 bits (468), Expect = 6e-45
 Identities = 83/96 (86%), Positives = 91/96 (94%), Gaps = 1/96 (1%)
 Frame = +1

Query: 253 RPFCP-VMEWQDCSVRKEVDIPVSVAYDCYSDREAFPRWMPFISSVKILEDKPDLSRWTL 429
           +PF P VMEWQDC+V+ E+D+PVSVAY CYSDRE+ PRWMPFISSVKILEDKPDLSRW+L
Sbjct: 117 KPFSPPVMEWQDCTVKMEIDVPVSVAYKCYSDRESIPRWMPFISSVKILEDKPDLSRWSL 176

Query: 430 KYKAFGRDIEFSWLARNMQPIPNQKIHWRSLEGLPN 537
           KY+AFGRDIEFSWLARNMQPIPNQKIHWRSLEGLPN
Sbjct: 177 KYQAFGRDIEFSWLARNMQPIPNQKIHWRSLEGLPN 212


>ref|XP_003535861.1| PREDICTED: uncharacterized protein LOC100816743 [Glycine max]
          Length = 223

 Score =  183 bits (464), Expect = 2e-44
 Identities = 80/93 (86%), Positives = 87/93 (93%)
 Frame = +1

Query: 259 FCPVMEWQDCSVRKEVDIPVSVAYDCYSDREAFPRWMPFISSVKILEDKPDLSRWTLKYK 438
           F PVMEWQDC+V+ E+D+P+SVAY CYSDREA P WMPFISSVKIL DKPDLSRW+LKYK
Sbjct: 73  FSPVMEWQDCTVKMEIDVPISVAYTCYSDREAIPNWMPFISSVKILPDKPDLSRWSLKYK 132

Query: 439 AFGRDIEFSWLARNMQPIPNQKIHWRSLEGLPN 537
           AFGRDIEFSWLARNMQPIPNQKIHWRS+EGLPN
Sbjct: 133 AFGRDIEFSWLARNMQPIPNQKIHWRSMEGLPN 165


>gb|ACU23407.1| unknown [Glycine max]
          Length = 223

 Score =  183 bits (464), Expect = 2e-44
 Identities = 80/93 (86%), Positives = 87/93 (93%)
 Frame = +1

Query: 259 FCPVMEWQDCSVRKEVDIPVSVAYDCYSDREAFPRWMPFISSVKILEDKPDLSRWTLKYK 438
           F PVMEWQDC+V+ E+D+P+SVAY CYSDREA P WMPFISSVKIL DKPDLSRW+LKYK
Sbjct: 73  FSPVMEWQDCTVKMEIDVPISVAYTCYSDREAIPNWMPFISSVKILPDKPDLSRWSLKYK 132

Query: 439 AFGRDIEFSWLARNMQPIPNQKIHWRSLEGLPN 537
           AFGRDIEFSWLARNMQPIPNQKIHWRS+EGLPN
Sbjct: 133 AFGRDIEFSWLARNMQPIPNQKIHWRSMEGLPN 165


>ref|XP_003519738.1| PREDICTED: uncharacterized protein LOC100790710 [Glycine max]
          Length = 215

 Score =  180 bits (456), Expect = 1e-43
 Identities = 79/93 (84%), Positives = 86/93 (92%)
 Frame = +1

Query: 259 FCPVMEWQDCSVRKEVDIPVSVAYDCYSDREAFPRWMPFISSVKILEDKPDLSRWTLKYK 438
           F PVMEWQDC+V+ E+D+P+SVAY CYSDREA P WMPFISSVKIL DKPDLSRW+LKYK
Sbjct: 65  FSPVMEWQDCTVKMEIDVPISVAYTCYSDREAIPNWMPFISSVKILPDKPDLSRWSLKYK 124

Query: 439 AFGRDIEFSWLARNMQPIPNQKIHWRSLEGLPN 537
           AFGRDIEFSWLARNMQPIPNQKIHWRS+EGL N
Sbjct: 125 AFGRDIEFSWLARNMQPIPNQKIHWRSMEGLQN 157


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