BLASTX nr result

ID: Coptis25_contig00017175 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00017175
         (846 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI34645.3| unnamed protein product [Vitis vinifera]              164   2e-38
ref|XP_002270850.1| PREDICTED: uncharacterized protein LOC100253...   164   2e-38
ref|XP_002518969.1| beta-1,3-n-acetylglucosaminyltransferase rad...   147   3e-33
ref|XP_002317032.1| predicted protein [Populus trichocarpa] gi|2...   137   2e-30
gb|AFW68383.1| hypothetical protein ZEAMMB73_324808 [Zea mays] g...   134   2e-29

>emb|CBI34645.3| unnamed protein product [Vitis vinifera]
          Length = 275

 Score =  164 bits (416), Expect = 2e-38
 Identities = 72/113 (63%), Positives = 94/113 (83%)
 Frame = +2

Query: 2   ISHPNEFDFDTRLTHRSVCKKPVIFYLKDAWKEGNATAGSYSRAKGSTDLKRRVLCFPRS 181
           I+H NEFDFDTR  +RSVCKKP++F+LKD  +EGNAT GSY RA+G  DLKR+V CFP+ 
Sbjct: 161 INHRNEFDFDTRDPYRSVCKKPILFFLKDVGREGNATLGSYERARGKDDLKRKVFCFPQM 220

Query: 182 PPLTHVQNIRVVGYPLSKYWHVVPRRLCCKVNQANDGILTLTVQQCERGAFNT 340
            PL +VQ+I+V+GYPLSK WH+VPRRLCC++NQ +  +L LTV QCE+G+F++
Sbjct: 221 RPLRYVQHIQVLGYPLSKNWHLVPRRLCCRLNQTSSELLKLTVGQCEKGSFSS 273


>ref|XP_002270850.1| PREDICTED: uncharacterized protein LOC100253017 [Vitis vinifera]
          Length = 533

 Score =  164 bits (416), Expect = 2e-38
 Identities = 72/113 (63%), Positives = 94/113 (83%)
 Frame = +2

Query: 2   ISHPNEFDFDTRLTHRSVCKKPVIFYLKDAWKEGNATAGSYSRAKGSTDLKRRVLCFPRS 181
           I+H NEFDFDTR  +RSVCKKP++F+LKD  +EGNAT GSY RA+G  DLKR+V CFP+ 
Sbjct: 419 INHRNEFDFDTRDPYRSVCKKPILFFLKDVGREGNATLGSYERARGKDDLKRKVFCFPQM 478

Query: 182 PPLTHVQNIRVVGYPLSKYWHVVPRRLCCKVNQANDGILTLTVQQCERGAFNT 340
            PL +VQ+I+V+GYPLSK WH+VPRRLCC++NQ +  +L LTV QCE+G+F++
Sbjct: 479 RPLRYVQHIQVLGYPLSKNWHLVPRRLCCRLNQTSSELLKLTVGQCEKGSFSS 531


>ref|XP_002518969.1| beta-1,3-n-acetylglucosaminyltransferase radical fringe, putative
           [Ricinus communis] gi|223541956|gb|EEF43502.1|
           beta-1,3-n-acetylglucosaminyltransferase radical fringe,
           putative [Ricinus communis]
          Length = 538

 Score =  147 bits (371), Expect = 3e-33
 Identities = 63/114 (55%), Positives = 89/114 (78%)
 Frame = +2

Query: 14  NEFDFDTRLTHRSVCKKPVIFYLKDAWKEGNATAGSYSRAKGSTDLKRRVLCFPRSPPLT 193
           +EFD DTR  H+S+CK+P++F+LKD  ++GNAT GSYSRA+   D +R+V CFPRSPPL 
Sbjct: 425 SEFDLDTRDPHKSICKRPILFFLKDIARQGNATLGSYSRARMKDDFRRKVFCFPRSPPLP 484

Query: 194 HVQNIRVVGYPLSKYWHVVPRRLCCKVNQANDGILTLTVQQCERGAFNTIFASV 355
           +V+NI+V+G+  SK WH VPRR CCK+N+ +D +LT++V QCE+G+  +   SV
Sbjct: 485 YVENIQVLGFSASKKWHWVPRRQCCKLNRTSDELLTISVGQCEKGSSGSFMDSV 538


>ref|XP_002317032.1| predicted protein [Populus trichocarpa] gi|222860097|gb|EEE97644.1|
           predicted protein [Populus trichocarpa]
          Length = 537

 Score =  137 bits (346), Expect = 2e-30
 Identities = 61/114 (53%), Positives = 85/114 (74%)
 Frame = +2

Query: 14  NEFDFDTRLTHRSVCKKPVIFYLKDAWKEGNATAGSYSRAKGSTDLKRRVLCFPRSPPLT 193
           NEFD DTR   +SVCK+PV+F+L+D  ++GN T G+Y +A+   DLKR   CF RS PL 
Sbjct: 424 NEFDLDTRDPSKSVCKRPVLFFLEDVERQGNTTLGTYVQARMKDDLKRSFFCFTRSAPLP 483

Query: 194 HVQNIRVVGYPLSKYWHVVPRRLCCKVNQANDGILTLTVQQCERGAFNTIFASV 355
           +V++I+V+GYPL K WH+ PRRLCCK+NQ +D +LT++V QCE+G+  +   SV
Sbjct: 484 YVESIQVLGYPLKKNWHLSPRRLCCKLNQTSDELLTISVGQCEKGSCGSFADSV 537


>gb|AFW68383.1| hypothetical protein ZEAMMB73_324808 [Zea mays]
           gi|413933833|gb|AFW68384.1| hypothetical protein
           ZEAMMB73_324808 [Zea mays]
          Length = 509

 Score =  134 bits (338), Expect = 2e-29
 Identities = 62/113 (54%), Positives = 79/113 (69%)
 Frame = +2

Query: 2   ISHPNEFDFDTRLTHRSVCKKPVIFYLKDAWKEGNATAGSYSRAKGSTDLKRRVLCFPRS 181
           +S  NEFDFDTR   +S+CKKP++F+LKD WK+GN T GSY+R+    DLKR+V CF RS
Sbjct: 393 MSQRNEFDFDTRDVQKSLCKKPILFFLKDVWKDGNITRGSYARSSARDDLKRKVFCF-RS 451

Query: 182 PPLTHVQNIRVVGYPLSKYWHVVPRRLCCKVNQANDGILTLTVQQCERGAFNT 340
           PPL  +  I+V   PLSK WH+ PRRLC  +  + DG L + VQQC RG F +
Sbjct: 452 PPLPDIDEIQVSSSPLSKRWHLAPRRLCSALKGSIDGTLFMFVQQCGRGTFGS 504


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