BLASTX nr result

ID: Coptis25_contig00017174 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00017174
         (947 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002266382.1| PREDICTED: vesicle transport protein USE1 [V...   287   3e-75
emb|CAN68312.1| hypothetical protein VITISV_028548 [Vitis vinifera]   286   6e-75
emb|CBI30101.3| unnamed protein product [Vitis vinifera]              271   2e-70
ref|XP_002267440.1| PREDICTED: vesicle transport protein USE1 [V...   270   4e-70
ref|XP_002278615.1| PREDICTED: vesicle transport protein USE1-li...   266   7e-69

>ref|XP_002266382.1| PREDICTED: vesicle transport protein USE1 [Vitis vinifera]
           gi|297735435|emb|CBI17875.3| unnamed protein product
           [Vitis vinifera]
          Length = 240

 Score =  287 bits (734), Expect = 3e-75
 Identities = 154/237 (64%), Positives = 180/237 (75%), Gaps = 3/237 (1%)
 Frame = -2

Query: 889 SKTEINLNRLLTAAPRQQNQTKLMHYVATLRELLEQLVEETTPEGLPRISKAKENDYXXX 710
           S+TE+NL RLL AAP+QQNQ KL+HYVATLRE LEQL EE T EGLPR+SK K N+Y   
Sbjct: 4   SRTEVNLRRLLAAAPQQQNQAKLIHYVATLREQLEQLTEERTLEGLPRVSKPKVNEYSEK 63

Query: 709 XXXXXXXXXXXXSMPRYS-ETVDVTGDGQIASTTEEKTYSP--PVLRRRLVSHPKVEDVN 539
                       S  + S E    T   +  S TEE+ + P  P LRRR V   K ED +
Sbjct: 64  IEAIASKIGSPSSNVQVSQEPFSGTSGKEGTSKTEEEDHMPLSPGLRRRFVPASKFEDRS 123

Query: 538 HEITEADPSAPVKLDDAAHSHIEKHRKLQDDLTDEMVGLARQLKESSLMMNQSLQDTEKL 359
           H+  +AD S PVKLD AA +HIEKHRKLQ+DLTDEMVGLA+QLK+SSL+M+QS+Q+TEK+
Sbjct: 124 HDTIKADASGPVKLDAAAQAHIEKHRKLQEDLTDEMVGLAKQLKQSSLLMSQSIQNTEKI 183

Query: 358 LDSTEKAVEHSLASTGHANTRAMEIYSRSFKTTCFTWLLIFIMTCIFIMVVLLIRVT 188
           LDSTEKAVEHSLASTGH NTRAM+IYS SFKTTCFTW++IF+MTCIFIMVVLLIRVT
Sbjct: 184 LDSTEKAVEHSLASTGHVNTRAMDIYSNSFKTTCFTWIMIFVMTCIFIMVVLLIRVT 240


>emb|CAN68312.1| hypothetical protein VITISV_028548 [Vitis vinifera]
          Length = 240

 Score =  286 bits (731), Expect = 6e-75
 Identities = 153/237 (64%), Positives = 180/237 (75%), Gaps = 3/237 (1%)
 Frame = -2

Query: 889 SKTEINLNRLLTAAPRQQNQTKLMHYVATLRELLEQLVEETTPEGLPRISKAKENDYXXX 710
           S+TE+NL RLL AAP+QQNQ KL+HYVATLRE LEQL EE T EGLPR+SK K N+Y   
Sbjct: 4   SRTEVNLRRLLAAAPQQQNQAKLIHYVATLREQLEQLTEERTLEGLPRVSKPKVNEYSEK 63

Query: 709 XXXXXXXXXXXXSMPRYS-ETVDVTGDGQIASTTEEKTYSP--PVLRRRLVSHPKVEDVN 539
                       S  + S E    T   +  S TEE+ + P  P LR+R V   K ED +
Sbjct: 64  IEAIASKITAPSSNVQVSQEPFSGTSGKEGTSKTEEEDHMPLSPGLRKRFVPASKFEDRS 123

Query: 538 HEITEADPSAPVKLDDAAHSHIEKHRKLQDDLTDEMVGLARQLKESSLMMNQSLQDTEKL 359
           H+  +AD S PVKLD AA +HIEKHRKLQ+DLTDEMVGLA+QLK+SSL+M+QS+Q+TEK+
Sbjct: 124 HDXIKADASGPVKLDAAAQAHIEKHRKLQEDLTDEMVGLAKQLKQSSLLMSQSIQNTEKI 183

Query: 358 LDSTEKAVEHSLASTGHANTRAMEIYSRSFKTTCFTWLLIFIMTCIFIMVVLLIRVT 188
           LDSTEKAVEHSLASTGH NTRAM+IYS SFKTTCFTW++IF+MTCIFIMVVLLIRVT
Sbjct: 184 LDSTEKAVEHSLASTGHVNTRAMDIYSNSFKTTCFTWIMIFVMTCIFIMVVLLIRVT 240


>emb|CBI30101.3| unnamed protein product [Vitis vinifera]
          Length = 299

 Score =  271 bits (693), Expect = 2e-70
 Identities = 148/240 (61%), Positives = 177/240 (73%), Gaps = 3/240 (1%)
 Frame = -2

Query: 898 VMG-SKTEINLNRLLTAAPRQQNQTKLMHYVATLRELLEQLVEETTPEGLPRISKAKEND 722
           VMG S+TE+NL RLL AAP+QQN+ KL+HYVATLRE LEQL EE T EGLPR+SK K N+
Sbjct: 60  VMGISRTEVNLRRLLAAAPQQQNRAKLIHYVATLREQLEQLTEERTLEGLPRVSKQKVNE 119

Query: 721 YXXXXXXXXXXXXXXXSMPRYSETVDVTGDGQIASTTEEKTYSP--PVLRRRLVSHPKVE 548
           Y               S  + S+       GQ + + +E+   P  P LRRR V    VE
Sbjct: 120 YAEEIEAIASKIIAPSSDVQVSQEPLSGTYGQESHSKDEEDSIPHSPGLRRRFVPASNVE 179

Query: 547 DVNHEITEADPSAPVKLDDAAHSHIEKHRKLQDDLTDEMVGLARQLKESSLMMNQSLQDT 368
           D  H+  +AD S PVKLD AA +H+EKHRKLQ+DLTDEMVGLA+QLK+ SL+M+QS++++
Sbjct: 180 DRTHDTVKADASGPVKLDAAAQAHVEKHRKLQEDLTDEMVGLAKQLKQGSLLMSQSIKNS 239

Query: 367 EKLLDSTEKAVEHSLASTGHANTRAMEIYSRSFKTTCFTWLLIFIMTCIFIMVVLLIRVT 188
           EK+LDSTEKAVEHSLASTG  NTRAMEI S  FKTTCFTW+LIF+MTCIFIMVVLLIRVT
Sbjct: 240 EKILDSTEKAVEHSLASTGRVNTRAMEINSNGFKTTCFTWILIFVMTCIFIMVVLLIRVT 299


>ref|XP_002267440.1| PREDICTED: vesicle transport protein USE1 [Vitis vinifera]
          Length = 239

 Score =  270 bits (690), Expect = 4e-70
 Identities = 145/236 (61%), Positives = 174/236 (73%), Gaps = 2/236 (0%)
 Frame = -2

Query: 889 SKTEINLNRLLTAAPRQQNQTKLMHYVATLRELLEQLVEETTPEGLPRISKAKENDYXXX 710
           S+TE+NL RLL AAP+QQN+ KL+HYVATLRE LEQL EE T EGLPR+SK K N+Y   
Sbjct: 4   SRTEVNLRRLLAAAPQQQNRAKLIHYVATLREQLEQLTEERTLEGLPRVSKQKVNEYAEE 63

Query: 709 XXXXXXXXXXXXSMPRYSETVDVTGDGQIASTTEEKTYSP--PVLRRRLVSHPKVEDVNH 536
                       S  + S+       GQ + + +E+   P  P LRRR V    VED  H
Sbjct: 64  IEAIASKIIAPSSDVQVSQEPLSGTYGQESHSKDEEDSIPHSPGLRRRFVPASNVEDRTH 123

Query: 535 EITEADPSAPVKLDDAAHSHIEKHRKLQDDLTDEMVGLARQLKESSLMMNQSLQDTEKLL 356
           +  +AD S PVKLD AA +H+EKHRKLQ+DLTDEMVGLA+QLK+ SL+M+QS++++EK+L
Sbjct: 124 DTVKADASGPVKLDAAAQAHVEKHRKLQEDLTDEMVGLAKQLKQGSLLMSQSIKNSEKIL 183

Query: 355 DSTEKAVEHSLASTGHANTRAMEIYSRSFKTTCFTWLLIFIMTCIFIMVVLLIRVT 188
           DSTEKAVEHSLASTG  NTRAMEI S  FKTTCFTW+LIF+MTCIFIMVVLLIRVT
Sbjct: 184 DSTEKAVEHSLASTGRVNTRAMEINSNGFKTTCFTWILIFVMTCIFIMVVLLIRVT 239


>ref|XP_002278615.1| PREDICTED: vesicle transport protein USE1-like [Vitis vinifera]
          Length = 245

 Score =  266 bits (679), Expect = 7e-69
 Identities = 148/240 (61%), Positives = 173/240 (72%), Gaps = 3/240 (1%)
 Frame = -2

Query: 898 VMG-SKTEINLNRLLTAAPRQQNQTKLMHYVATLRELLEQLVEETTPEGLPRISKAKEND 722
           VMG S+TE+NL RLL AAP+QQNQ KL+HYVATLRE LEQL EE T EGLPR+SK K N+
Sbjct: 6   VMGISRTEVNLRRLLAAAPQQQNQAKLIHYVATLREQLEQLSEERTLEGLPRVSKQKVNE 65

Query: 721 YXXXXXXXXXXXXXXXSMPRYSETVDVTGDGQIASTTEEKTYSP--PVLRRRLVSHPKVE 548
           Y               S  + S+       GQ   + E +   P  P LRRR V    VE
Sbjct: 66  YAEEIEAMASKIIAPSSDVQVSQEPLSGTYGQEGHSKEGEDSIPHSPGLRRRFVPASNVE 125

Query: 547 DVNHEITEADPSAPVKLDDAAHSHIEKHRKLQDDLTDEMVGLARQLKESSLMMNQSLQDT 368
           D  H+  +AD   PVKLD AA +HIEKHRKLQ+DLTDEMVGLA+QLK+ SL+M+QS++++
Sbjct: 126 DRTHDTVKADTLGPVKLDVAAQAHIEKHRKLQEDLTDEMVGLAKQLKQGSLLMSQSIENS 185

Query: 367 EKLLDSTEKAVEHSLASTGHANTRAMEIYSRSFKTTCFTWLLIFIMTCIFIMVVLLIRVT 188
           EK+LDSTEKAVEHSLASTG  NTRAMEI S  FKTTCFTW+LIF+M CIFIMVVLLIRVT
Sbjct: 186 EKILDSTEKAVEHSLASTGRVNTRAMEINSNGFKTTCFTWILIFVMMCIFIMVVLLIRVT 245


Top