BLASTX nr result

ID: Coptis25_contig00017149 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00017149
         (1203 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002282306.1| PREDICTED: uncharacterized protein LOC100267...    97   8e-18
ref|XP_002326178.1| predicted protein [Populus trichocarpa] gi|2...    84   7e-14
ref|XP_002519544.1| conserved hypothetical protein [Ricinus comm...    78   5e-12
ref|XP_004137970.1| PREDICTED: uncharacterized protein LOC101213...    76   1e-11
gb|ACA35277.1| hypothetical protein [Cucumis sativus]                  76   1e-11

>ref|XP_002282306.1| PREDICTED: uncharacterized protein LOC100267366 [Vitis vinifera]
          Length = 547

 Score = 97.1 bits (240), Expect = 8e-18
 Identities = 78/249 (31%), Positives = 126/249 (50%), Gaps = 29/249 (11%)
 Frame = -1

Query: 1008 NRMEIKL-LKLQLIYQTHSSKTLLLKIFIFATLMALIPCFDLIYVLNGC-----NIINSP 847
            +RM IK  LK Q++Y +  ++ L L+  +FA+++A++P   ++           N  + P
Sbjct: 80   SRMGIKAALKWQILYGS-LARRLFLRACLFASVLAIVPLVQIVREARAVEPFAVNFEDCP 138

Query: 846  ITFQTINLHMNVTEL--------------------NSS---FHTLLSTNYLNPNLKKTLI 736
            +   +  L   V  L                    NS+   F  L+  + L+ N  KTL 
Sbjct: 139  LDVSSNPLFFRVDYLRPLSALVFPLFGALPCKGPENSTIRVFRELMEMDLLD-NEAKTLC 197

Query: 735  IGSESARAVMVMRKLGFRDTVGVNSKPCSSLVKRGDIYALPLKEDSFDFVFSTAMIDGVK 556
            +G  S  A+  +R+LGF + +GV+  P  SL+++  IY L  KE+SFDFVFS A +D V 
Sbjct: 198  VGVGSGSAISALRELGFSNALGVDRHPFFSLLRKRFIYELDFKENSFDFVFSRA-LDKVS 256

Query: 555  VPARMVLEMEXXXXXXXXXXXXXXXXXXXVPARDVMKAAAPVSSYLKFSDVVDVRTVNCT 376
            VPA ++LE+E                     +  ++++A PVSS+LK S+VV V  +N  
Sbjct: 257  VPALLMLEIERVLRPGGIGAILVGAHDYN--SGSLIRSATPVSSFLKSSNVVHVSGINSF 314

Query: 375  VMVIFKKRF 349
             +V+F+KRF
Sbjct: 315  TLVVFEKRF 323


>ref|XP_002326178.1| predicted protein [Populus trichocarpa] gi|222833371|gb|EEE71848.1|
            predicted protein [Populus trichocarpa]
          Length = 459

 Score = 84.0 bits (206), Expect = 7e-14
 Identities = 74/242 (30%), Positives = 117/242 (48%), Gaps = 25/242 (10%)
 Frame = -1

Query: 1002 MEIKLLKLQLIYQTHSSKTLLLKIFIFATLMALIPCFDLIYVLNGCNIINS--------P 847
            M +K L+ Q++  +  ++ +LL+ F+ AT +++IP   ++   +   +++S        P
Sbjct: 1    MNLKALRCQILSGS-IARRVLLRAFMLATAISIIPSLQILSGSDPGLLLDSVRYNECDFP 59

Query: 846  ITFQTINL-----------------HMNVTELNSSFHTLLSTNYLNPNLKKTLIIGSESA 718
            + F   NL                  MNVT   +    L+    ++ + K  L +G  SA
Sbjct: 60   LMFMGSNLLKNRFLKPFWGSIDCKDDMNVT--TNVARELMGMQMIDSSAK-ALCVGEGSA 116

Query: 717  RAVMVMRKLGFRDTVGVNSKPCSSLVKRGDIYALPLKEDSFDFVFSTAMIDGVKVPARMV 538
             AV  +R LGF +  GV+  P  SL  +  +Y L   E+SFDFVFS   +D V VPA +V
Sbjct: 117  PAVYALRDLGFVNAFGVHKLPFFSLKHKRVVYELEYAENSFDFVFS-GDLDKVSVPAIVV 175

Query: 537  LEMEXXXXXXXXXXXXXXXXXXXVPARDVMKAAAPVSSYLKFSDVVDVRTVNCTVMVIFK 358
            LE+E                     A  ++++A PVSS LK S++V V  VN   +V+FK
Sbjct: 176  LEIERVLKPGGIGAILVGLNSLN--ANSLIRSAMPVSSLLKNSNIVHVGYVNEYTLVVFK 233

Query: 357  KR 352
            KR
Sbjct: 234  KR 235


>ref|XP_002519544.1| conserved hypothetical protein [Ricinus communis]
            gi|223541407|gb|EEF42958.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 460

 Score = 77.8 bits (190), Expect = 5e-12
 Identities = 70/242 (28%), Positives = 109/242 (45%), Gaps = 25/242 (10%)
 Frame = -1

Query: 1002 MEIKLLKLQLIYQTHSSKTLLLKIFIFATLMALIPCFDLIY----------VLNGCNIIN 853
            M++K   LQ++  +  ++ LL++ F+ A+ +++ P   LI             + C++  
Sbjct: 1    MDLKASTLQILGGS-IARRLLVRAFMLASALSIFPLVQLIIGSDPILLDSVKFHECDV-- 57

Query: 852  SPITFQTINLHMN---------------VTELNSSFHTLLSTNYLNPNLKKTLIIGSESA 718
             P T ++ NL  N               V         L+S   L     K L +G  SA
Sbjct: 58   -PFTIKSKNLFQNRFLKPIWNSFECKEYVNLTTDVVRELMSKQLLLDYSAKALCVGEGSA 116

Query: 717  RAVMVMRKLGFRDTVGVNSKPCSSLVKRGDIYALPLKEDSFDFVFSTAMIDGVKVPARMV 538
             AV  +R+LGF +  G +  P  SL  R  +Y L   ++ FDFVFS   +D V VPA +V
Sbjct: 117  SAVYALRELGFVNACGAHRHPFFSLKHRKFVYELQYADNFFDFVFSRD-LDEVSVPAILV 175

Query: 537  LEMEXXXXXXXXXXXXXXXXXXXVPARDVMKAAAPVSSYLKFSDVVDVRTVNCTVMVIFK 358
            LE+E                        ++++A PVSS LK S+VV V  V    +V+F+
Sbjct: 176  LEIERVLKPGGIGAMLVGVNGLN--PNGLIRSATPVSSLLKASNVVHVGYVQKYTLVVFQ 233

Query: 357  KR 352
            KR
Sbjct: 234  KR 235


>ref|XP_004137970.1| PREDICTED: uncharacterized protein LOC101213900 [Cucumis sativus]
           gi|449513672|ref|XP_004164390.1| PREDICTED:
           uncharacterized protein LOC101231697 [Cucumis sativus]
          Length = 480

 Score = 76.3 bits (186), Expect = 1e-11
 Identities = 52/145 (35%), Positives = 74/145 (51%)
 Frame = -1

Query: 783 LLSTNYLNPNLKKTLIIGSESARAVMVMRKLGFRDTVGVNSKPCSSLVKRGDIYALPLKE 604
           L+    LN +  K+L +G  S  AV+ +R +GF D +GV      SL ++  +Y L  K 
Sbjct: 104 LMEKKLLN-HTAKSLCVGEGSGSAVLALRDIGFSDVIGVGQHRFFSLRRKQFVYELDFKS 162

Query: 603 DSFDFVFSTAMIDGVKVPARMVLEMEXXXXXXXXXXXXXXXXXXXVPARDVMKAAAPVSS 424
             FDFVFS   +D   VPA +VLE+E                       ++++AA PVSS
Sbjct: 163 GYFDFVFSRD-LDRYSVPALLVLEIERVLRPGGIGAVIVSTSESM--PNNLIRAATPVSS 219

Query: 423 YLKFSDVVDVRTVNCTVMVIFKKRF 349
            LK S V+ V  VN   +V+FKK+F
Sbjct: 220 LLKTSTVMHVGHVNNLTLVVFKKKF 244


>gb|ACA35277.1| hypothetical protein [Cucumis sativus]
          Length = 441

 Score = 76.3 bits (186), Expect = 1e-11
 Identities = 52/145 (35%), Positives = 74/145 (51%)
 Frame = -1

Query: 783 LLSTNYLNPNLKKTLIIGSESARAVMVMRKLGFRDTVGVNSKPCSSLVKRGDIYALPLKE 604
           L+    LN +  K+L +G  S  AV+ +R +GF D +GV      SL ++  +Y L  K 
Sbjct: 65  LMEKKLLN-HTAKSLCVGEGSGSAVLALRDIGFSDVIGVGQHRFFSLRRKQFVYELDFKS 123

Query: 603 DSFDFVFSTAMIDGVKVPARMVLEMEXXXXXXXXXXXXXXXXXXXVPARDVMKAAAPVSS 424
             FDFVFS   +D   VPA +VLE+E                       ++++AA PVSS
Sbjct: 124 GYFDFVFSRD-LDRYSVPALLVLEIERVLRPGGIGAVIVSTSESM--PNNLIRAATPVSS 180

Query: 423 YLKFSDVVDVRTVNCTVMVIFKKRF 349
            LK S V+ V  VN   +V+FKK+F
Sbjct: 181 LLKTSTVMHVGHVNNLTLVVFKKKF 205


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