BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00017146
         (1145 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002266380.1| PREDICTED: ATP-dependent Clp protease proteo...   449   e-124
ref|XP_003525778.1| PREDICTED: ATP-dependent Clp protease proteo...   432   e-119
ref|XP_004147568.1| PREDICTED: ATP-dependent Clp protease proteo...   426   e-117
ref|XP_003549891.1| PREDICTED: ATP-dependent Clp protease proteo...   425   e-116
ref|XP_002509628.1| ATP-dependent Clp protease proteolytic subun...   408   e-111

>ref|XP_002266380.1| PREDICTED: ATP-dependent Clp protease proteolytic subunit-related
            protein 2, chloroplastic [Vitis vinifera]
            gi|147794105|emb|CAN62361.1| hypothetical protein
            VITISV_031921 [Vitis vinifera]
            gi|297742668|emb|CBI34817.3| unnamed protein product
            [Vitis vinifera]
          Length = 291

 Score =  449 bits (1156), Expect = e-124
 Identities = 220/291 (75%), Positives = 257/291 (88%), Gaps = 1/291 (0%)
 Frame = -3

Query: 1065 MALSLHSTGSSCLQSRNGITASQSSLSCATQVFVGLKSQCTSSFGSYKPNMSVQFHDRVH 886
            MA+ LHST SS     +    SQ  LSCAT++F GLK Q  S+FG+ KPN++V+F ++VH
Sbjct: 1    MAVHLHSTPSSSSSLHSRTRVSQPPLSCATKLFSGLKLQSASTFGTGKPNLTVEFFNKVH 60

Query: 885  KSLHFRTSN-KATRAQIRMMPIGVPRVPFRTPGEGTWQWVDLWNALYRERVIFIGDHINE 709
            KS+  RTS+ K+TRA++RMMPIG PRVP+RTPGEGTWQWVDLWNALYRERVI+IG HI+E
Sbjct: 61   KSVQSRTSDSKSTRARVRMMPIGTPRVPYRTPGEGTWQWVDLWNALYRERVIYIGQHIDE 120

Query: 708  ELSNQILATMLYLDSIDSSKKIYLYINGPGGDLTPSLSIYDTMQSLKSPVCTHCVGYAYN 529
            E SNQ+LATMLYLDSI+SSK+++ YIN PGGDLTPSL+IYDTMQSLKSPV T+C+G+AYN
Sbjct: 121  EFSNQLLATMLYLDSIESSKRMFFYINSPGGDLTPSLAIYDTMQSLKSPVGTNCLGFAYN 180

Query: 528  LAGFLLAAGEKGNRVAMPLSRIALESPAGAARGQADDIENEATELIRIRDYLFKELSEKT 349
            LA FLLAAGEKGNR+AMPLSRIAL+SPAGAARGQADDI NEA EL+RIRDYLF EL+ KT
Sbjct: 181  LATFLLAAGEKGNRLAMPLSRIALQSPAGAARGQADDIRNEANELLRIRDYLFSELANKT 240

Query: 348  GQPIEKINKDLSRMKRFNAQEALEYGLIDRIIRPPRIKADAPQKEAGTGLG 196
            GQPI+KINKDL RMKRFNAQEALEYGLIDRI+RPPR+KADAP+K+AGTGLG
Sbjct: 241  GQPIDKINKDLRRMKRFNAQEALEYGLIDRILRPPRVKADAPRKDAGTGLG 291


>ref|XP_003525778.1| PREDICTED: ATP-dependent Clp protease proteolytic subunit-related
            protein 2, chloroplastic-like [Glycine max]
          Length = 312

 Score =  432 bits (1111), Expect = e-119
 Identities = 214/292 (73%), Positives = 252/292 (86%), Gaps = 1/292 (0%)
 Frame = -3

Query: 1068 TMALSLHSTGSSCLQSRNGITASQSSLSCATQVFVGLKSQCTSSFGSYKPNMSVQFHDRV 889
            +MA+  ++TGS+ L S        S+ S AT+++ GLK Q  S FG+ KPN++ +F+ +V
Sbjct: 27   SMAVVPYTTGSAPLLS------PPSTSSVATKLYSGLKLQAASPFGAAKPNVTAEFYGKV 80

Query: 888  HKSLHFRTSNKATR-AQIRMMPIGVPRVPFRTPGEGTWQWVDLWNALYRERVIFIGDHIN 712
            H +LH R +N  T  A+IRMMPIG P+VP+RTPGEGTWQWVD+WNALYRERVIFIG  I+
Sbjct: 81   HNTLHCRYANHNTSMARIRMMPIGTPKVPYRTPGEGTWQWVDVWNALYRERVIFIGQEID 140

Query: 711  EELSNQILATMLYLDSIDSSKKIYLYINGPGGDLTPSLSIYDTMQSLKSPVCTHCVGYAY 532
            EE SNQILATMLYLDSI++SKK+Y+YINGPGGDLTPS++IYDTMQSL+SPV THCVGYAY
Sbjct: 141  EEFSNQILATMLYLDSIENSKKLYMYINGPGGDLTPSMAIYDTMQSLQSPVATHCVGYAY 200

Query: 531  NLAGFLLAAGEKGNRVAMPLSRIALESPAGAARGQADDIENEATELIRIRDYLFKELSEK 352
            +LA FLLAAGEKGNR AMPLSR+AL SPAGAARGQADDI+NEA EL+RIRDYLF EL++K
Sbjct: 201  SLAAFLLAAGEKGNRSAMPLSRVALTSPAGAARGQADDIQNEANELLRIRDYLFNELAQK 260

Query: 351  TGQPIEKINKDLSRMKRFNAQEALEYGLIDRIIRPPRIKADAPQKEAGTGLG 196
            TGQP+EKI KDLSRMKRFNAQEALEYGLIDRI+RPPRIKADAP+KEAGTGLG
Sbjct: 261  TGQPVEKITKDLSRMKRFNAQEALEYGLIDRIVRPPRIKADAPRKEAGTGLG 312


>ref|XP_004147568.1| PREDICTED: ATP-dependent Clp protease proteolytic subunit-related
            protein 2, chloroplastic-like [Cucumis sativus]
            gi|449523577|ref|XP_004168800.1| PREDICTED: ATP-dependent
            Clp protease proteolytic subunit-related protein 2,
            chloroplastic-like [Cucumis sativus]
          Length = 285

 Score =  426 bits (1095), Expect = e-117
 Identities = 207/284 (72%), Positives = 246/284 (86%), Gaps = 1/284 (0%)
 Frame = -3

Query: 1044 TGSSCLQSRNGITASQSSLSCATQVFVGLKSQCTSSFGSYKPNMSVQFHDRVHKSLHFRT 865
            T   CLQ +  I  SQ SLS AT+V+ GLK Q  S FG  KPN++ +F+ +VHKSL  RT
Sbjct: 4    TSIPCLQPQ--IKVSQPSLSVATKVYTGLKPQSASPFGGAKPNITAEFYGKVHKSLQTRT 61

Query: 864  SNK-ATRAQIRMMPIGVPRVPFRTPGEGTWQWVDLWNALYRERVIFIGDHINEELSNQIL 688
            +NK A RAQ +MMPIG PRVP++TPGEG WQWVDLWNALYRERVIFIGD+++EE SNQIL
Sbjct: 62   NNKKAARAQFQMMPIGTPRVPYKTPGEGFWQWVDLWNALYRERVIFIGDYVDEEFSNQIL 121

Query: 687  ATMLYLDSIDSSKKIYLYINGPGGDLTPSLSIYDTMQSLKSPVCTHCVGYAYNLAGFLLA 508
            ATMLYLDS+++SKK+Y+YINGPGGDLTP+L++YDTMQSLKSP+ THC+G AYN+A FLLA
Sbjct: 122  ATMLYLDSVEASKKLYIYINGPGGDLTPTLALYDTMQSLKSPIATHCMGQAYNMAAFLLA 181

Query: 507  AGEKGNRVAMPLSRIALESPAGAARGQADDIENEATELIRIRDYLFKELSEKTGQPIEKI 328
            AGEKGNR AMPLSRIAL+SPAG+ARG+ADDI+NEA +L++IRDYLF ELS+KTGQP+EKI
Sbjct: 182  AGEKGNRSAMPLSRIALQSPAGSARGRADDIQNEANQLLKIRDYLFDELSKKTGQPVEKI 241

Query: 327  NKDLSRMKRFNAQEALEYGLIDRIIRPPRIKADAPQKEAGTGLG 196
            +KDLS  KRFNAQ+ALEYGLIDRI RP RIKADAP+K+ GTGLG
Sbjct: 242  HKDLSGTKRFNAQQALEYGLIDRIARPARIKADAPRKDDGTGLG 285


>ref|XP_003549891.1| PREDICTED: ATP-dependent Clp protease proteolytic subunit-related
            protein 2, chloroplastic-like [Glycine max]
          Length = 285

 Score =  425 bits (1092), Expect = e-116
 Identities = 211/291 (72%), Positives = 249/291 (85%), Gaps = 1/291 (0%)
 Frame = -3

Query: 1065 MALSLHSTGSSCLQSRNGITASQSSLSCATQVFVGLKSQCTSSFGSYKPNMSVQFHDRVH 886
            MA++ ++TGS+   S         + S AT+++ GLK Q  SSF + +PN++ +F+ +VH
Sbjct: 1    MAVAPYTTGSAPRFS------PPPTSSVATKLYSGLKLQAASSFRAARPNVTAEFYGKVH 54

Query: 885  KSLHFRTSN-KATRAQIRMMPIGVPRVPFRTPGEGTWQWVDLWNALYRERVIFIGDHINE 709
             +LH R +N   + A+IRMMPIG P+VP+RTPGEGTWQWVD+WNALYRERVIFIG  I+E
Sbjct: 55   NTLHCRYANHNPSMARIRMMPIGTPKVPYRTPGEGTWQWVDVWNALYRERVIFIGQEIDE 114

Query: 708  ELSNQILATMLYLDSIDSSKKIYLYINGPGGDLTPSLSIYDTMQSLKSPVCTHCVGYAYN 529
            E SNQILATMLYLDSID+SKK+Y+YINGPGGDLTPS++IYDTMQSL+SPV THCVGYAY+
Sbjct: 115  EFSNQILATMLYLDSIDNSKKLYMYINGPGGDLTPSMAIYDTMQSLQSPVATHCVGYAYS 174

Query: 528  LAGFLLAAGEKGNRVAMPLSRIALESPAGAARGQADDIENEATELIRIRDYLFKELSEKT 349
            LA FLLAAGEK NR AMPLSR+AL SPAGAARGQADDI+NEA EL+RIRDYLF ELS+KT
Sbjct: 175  LAAFLLAAGEKSNRSAMPLSRVALTSPAGAARGQADDIQNEANELLRIRDYLFNELSKKT 234

Query: 348  GQPIEKINKDLSRMKRFNAQEALEYGLIDRIIRPPRIKADAPQKEAGTGLG 196
            GQP+EKI KDLSRMKRFNAQEALEYGLIDRI+RPPRIKADAP+KEAGTGLG
Sbjct: 235  GQPLEKITKDLSRMKRFNAQEALEYGLIDRIVRPPRIKADAPRKEAGTGLG 285


>ref|XP_002509628.1| ATP-dependent Clp protease proteolytic subunit, putative [Ricinus
            communis] gi|223549527|gb|EEF51015.1| ATP-dependent Clp
            protease proteolytic subunit, putative [Ricinus communis]
          Length = 279

 Score =  408 bits (1048), Expect = e-111
 Identities = 198/270 (73%), Positives = 233/270 (86%), Gaps = 1/270 (0%)
 Frame = -3

Query: 1002 SQSSLSCATQVFVGLKSQCTSSFGSYKPNMSVQFHDRVHKSLHFRT-SNKATRAQIRMMP 826
            +Q SLSC T+++ GLK Q  S + + +PN++ +F+ RV+KSL   T S+ A  A +RMMP
Sbjct: 10   NQPSLSCGTKLYSGLKLQSPSLYATGRPNLTAEFYGRVNKSLQCGTRSHSAIHAGVRMMP 69

Query: 825  IGVPRVPFRTPGEGTWQWVDLWNALYRERVIFIGDHINEELSNQILATMLYLDSIDSSKK 646
            IG PRVP+RTPGEGTWQWVDLWNALYRERVIFIG +I+EE SNQILATMLYLD+ID +K+
Sbjct: 70   IGTPRVPYRTPGEGTWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDTIDDNKR 129

Query: 645  IYLYINGPGGDLTPSLSIYDTMQSLKSPVCTHCVGYAYNLAGFLLAAGEKGNRVAMPLSR 466
            IY YINGPGGDLTP+L+IYDTMQSLKSPV THCVG+AYNLAGF+LAAGEKGNR AMPLSR
Sbjct: 130  IYFYINGPGGDLTPTLAIYDTMQSLKSPVGTHCVGFAYNLAGFILAAGEKGNRSAMPLSR 189

Query: 465  IALESPAGAARGQADDIENEATELIRIRDYLFKELSEKTGQPIEKINKDLSRMKRFNAQE 286
            IAL+SPAGAARGQADDI NEA EL+RI+DYL+ EL++KTGQP EKINKDLSRMKRFNAQE
Sbjct: 190  IALQSPAGAARGQADDIRNEANELLRIKDYLYNELAKKTGQPAEKINKDLSRMKRFNAQE 249

Query: 285  ALEYGLIDRIIRPPRIKADAPQKEAGTGLG 196
            AL+YGLIDRIIRPP + AD+  ++   GLG
Sbjct: 250  ALDYGLIDRIIRPPAVDADSAPRDPSAGLG 279