BLASTX nr result

ID: Coptis25_contig00017143 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00017143
         (983 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001064234.2| Os10g0170600 [Oryza sativa Japonica Group] g...   139   8e-31
gb|AAP54387.2| hAT family dimerisation domain containing protein...   139   8e-31
gb|AAG13541.1|AC023240_14 putative Tam3-transposase [Oryza sativ...   137   4e-30
ref|NP_001047913.1| Os02g0713600 [Oryza sativa Japonica Group] g...   128   2e-27
ref|NP_001062550.1| Os09g0101200 [Oryza sativa Japonica Group] g...   126   7e-27

>ref|NP_001064234.2| Os10g0170600 [Oryza sativa Japonica Group]
            gi|21671885|gb|AAM74247.1|AC074355_9 Putative
            transposable element [Oryza sativa Japonica Group]
            gi|31430424|gb|AAP52341.1| hAT family dimerisation domain
            containing protein [Oryza sativa Japonica Group]
            gi|255679241|dbj|BAF26148.2| Os10g0170600 [Oryza sativa
            Japonica Group]
          Length = 772

 Score =  139 bits (351), Expect = 8e-31
 Identities = 78/215 (36%), Positives = 128/215 (59%), Gaps = 5/215 (2%)
 Frame = -3

Query: 924  KYDKYWKDIPKVLGLASCMDPRYKLTVLELCLDLNYNYVAPPVTEVNPIPKEN--PKLKD 751
            K+DKYWKDI   +GLA+ +DPR+K+           +Y+   +  +     E    K+ +
Sbjct: 556  KFDKYWKDIQGPMGLATILDPRFKI-----------DYLLGFIETITGQSSEECATKVAE 604

Query: 750  YRVTLYELFEEYSRKMNQDGSVVTEATTSSVGDDNM---VFALLSKRRELAVKTCKSDLQ 580
             + TLY+L +EY  + ++D    TE++   + + ++   + A ++ RR  A++  KS+L 
Sbjct: 605  VKDTLYDLMKEYEVEDDEDN---TESSAPPLVNSDLLSSITARVTSRRPAAIRV-KSELD 660

Query: 579  RYLDQPTIVDSSESFDVLEWWKTQGTAYPILAAMARDLLTIPVSTVPSESVFSASERVVS 400
            RYL+   +  ++E+F +L+WWK  GT++P L  +ARD+  IPVSTV SES FS S RV+S
Sbjct: 661  RYLEDELVSINTENFKILDWWKVAGTSFPTLRKVARDIFAIPVSTVASESAFSTSGRVLS 720

Query: 399  KCRSSLLPETVEALICLKDWFQAEEGLQDEDLEDF 295
            + RS L PE +EAL+C +DW + +    +E+   F
Sbjct: 721  EHRSRLTPELLEALMCSQDWLRNKYRADNEEAASF 755


>gb|AAP54387.2| hAT family dimerisation domain containing protein [Oryza sativa
            Japonica Group]
          Length = 756

 Score =  139 bits (351), Expect = 8e-31
 Identities = 78/215 (36%), Positives = 128/215 (59%), Gaps = 5/215 (2%)
 Frame = -3

Query: 924  KYDKYWKDIPKVLGLASCMDPRYKLTVLELCLDLNYNYVAPPVTEVNPIPKEN--PKLKD 751
            K+DKYWKDI   +GLA+ +DPR+K+           +Y+   +  +     E    K+ +
Sbjct: 540  KFDKYWKDIQGPMGLATILDPRFKI-----------DYLLGFIETITGQSSEECATKVAE 588

Query: 750  YRVTLYELFEEYSRKMNQDGSVVTEATTSSVGDDNM---VFALLSKRRELAVKTCKSDLQ 580
             + TLY+L +EY  + ++D    TE++   + + ++   + A ++ RR  A++  KS+L 
Sbjct: 589  VKDTLYDLMKEYEVEDDEDN---TESSAPPLVNSDLLSSITARVTSRRPAAIRV-KSELD 644

Query: 579  RYLDQPTIVDSSESFDVLEWWKTQGTAYPILAAMARDLLTIPVSTVPSESVFSASERVVS 400
            RYL+   +  ++E+F +L+WWK  GT++P L  +ARD+  IPVSTV SES FS S RV+S
Sbjct: 645  RYLEDELVSINTENFKILDWWKVAGTSFPTLRKVARDIFAIPVSTVASESAFSTSGRVLS 704

Query: 399  KCRSSLLPETVEALICLKDWFQAEEGLQDEDLEDF 295
            + RS L PE +EAL+C +DW + +    +E+   F
Sbjct: 705  EHRSRLTPELLEALMCSQDWLRNKYRADNEEAASF 739


>gb|AAG13541.1|AC023240_14 putative Tam3-transposase [Oryza sativa Japonica Group]
          Length = 568

 Score =  137 bits (345), Expect = 4e-30
 Identities = 76/202 (37%), Positives = 123/202 (60%), Gaps = 5/202 (2%)
 Frame = -3

Query: 924 KYDKYWKDIPKVLGLASCMDPRYKLTVLELCLDLNYNYVAPPVTEVNPIPKEN--PKLKD 751
           K+DKYWKDI   +GLA+ +DPR+K+           +Y+   +  +     E    K+ +
Sbjct: 367 KFDKYWKDIQGPMGLATILDPRFKI-----------DYLLGFIETITGQSSEECATKVAE 415

Query: 750 YRVTLYELFEEYSRKMNQDGSVVTEATTSSVGDDNM---VFALLSKRRELAVKTCKSDLQ 580
            + TLY+L +EY  + ++D    TE++   + + ++   + A ++ RR  A++  KS+L 
Sbjct: 416 VKDTLYDLMKEYEVEDDEDN---TESSAPPLVNSDLLSSITARVTSRRPAAIRV-KSELD 471

Query: 579 RYLDQPTIVDSSESFDVLEWWKTQGTAYPILAAMARDLLTIPVSTVPSESVFSASERVVS 400
           RYL+   +  ++E+F +L+WWK  GT++P L  +ARD+  IPVSTV SES FS S RV+S
Sbjct: 472 RYLEDELVSINTENFKILDWWKVAGTSFPTLRKVARDIFAIPVSTVASESAFSTSGRVLS 531

Query: 399 KCRSSLLPETVEALICLKDWFQ 334
           + RS L PE +EAL+C +DW +
Sbjct: 532 EHRSRLTPELLEALMCSQDWLR 553


>ref|NP_001047913.1| Os02g0713600 [Oryza sativa Japonica Group]
           gi|113537444|dbj|BAF09827.1| Os02g0713600 [Oryza sativa
           Japonica Group]
          Length = 418

 Score =  128 bits (321), Expect = 2e-27
 Identities = 74/201 (36%), Positives = 119/201 (59%), Gaps = 4/201 (1%)
 Frame = -3

Query: 924 KYDKYWKDIPKVLGLASCMDPRYKLTVLELCLDLNYNYVAPPVTEVNPIPKEN--PKLKD 751
           K+DKYWKDI   +GLA+ +DPR+K+           +Y+   +  +     E    K+ +
Sbjct: 226 KFDKYWKDIQGPMGLATILDPRFKI-----------DYLLGFIETITGQSSEECATKVAE 274

Query: 750 YRVTLYELFEEYSRKMNQDGSVVTEATTSSVGDDNMVFALLSK--RRELAVKTCKSDLQR 577
            + TLY+L E Y  + ++D    TE++   + + +++ ++ ++   R  A    KS+L R
Sbjct: 275 VKDTLYDLME-YEVEDDEDN---TESSAPPLVNSDLLSSITARVTSRTPAAIRVKSELDR 330

Query: 576 YLDQPTIVDSSESFDVLEWWKTQGTAYPILAAMARDLLTIPVSTVPSESVFSASERVVSK 397
           YL+   +  ++E+F +L+WWK  GT++P L  +ARD+  IPVSTV SES FS S RV+S+
Sbjct: 331 YLEDELVSINTENFKILDWWKVVGTSFPTLRKVARDIFAIPVSTVASESAFSTSGRVLSE 390

Query: 396 CRSSLLPETVEALICLKDWFQ 334
            RS L  E +EAL+C +DW Q
Sbjct: 391 HRSRLTSELLEALMCSQDWLQ 411


>ref|NP_001062550.1| Os09g0101200 [Oryza sativa Japonica Group]
           gi|113630783|dbj|BAF24464.1| Os09g0101200 [Oryza sativa
           Japonica Group]
          Length = 501

 Score =  126 bits (317), Expect = 7e-27
 Identities = 88/259 (33%), Positives = 128/259 (49%), Gaps = 31/259 (11%)
 Frame = -3

Query: 978 KRYEHEPSFRNLCESIKLKYDKYWKDIPKVLGLASCMDPRYKLTVLELCLDLNYNYVAPP 799
           +R+E +   + +  ++ +K+ KYW     VL + + MDP  K+  L       Y Y    
Sbjct: 260 ERWEQDQLLQEMANAMYVKFQKYWNVPNIVLLVVAVMDPTQKIDYLRF-----YFYTIGQ 314

Query: 798 VTEVNPIPKENPKLKDYRVTLYELFEEYSRKMNQ----------DGSVVTEATTSSVGDD 649
             E         K+K+ R  L + + EY +              +  +  + ++SS+G  
Sbjct: 315 NVE--------EKIKELRTCLNKYYLEYEKIAGSCELPTFIERDEHILANDPSSSSLGG- 365

Query: 648 NMVFALLSKR-----------RELAVKTCKSDLQRYLDQPTI-VDSSESFDVLEWWKTQG 505
               ALL KR           + + + T KS+L  YL+ P +  +S E+FDVL WWK   
Sbjct: 366 ----ALLGKRCIELAFAHFASQNIEMHTKKSELDNYLEDPRVHYNSDENFDVLSWWKRNA 421

Query: 504 TAYPILAAMARDLLTIPVSTVPSESVFSASERVVSKCRSSLLPETVEALICLKDWF---- 337
             YP L+ MARD L IPVSTV SES FSA+ R++ K R+S+ PET+EA ICLKDW     
Sbjct: 422 DVYPTLSLMARDFLAIPVSTVSSESAFSAAGRLLGKDRTSMSPETLEASICLKDWIIGFD 481

Query: 336 -----QAEEGLQDEDLEDF 295
                 A EG +  DLED+
Sbjct: 482 DDEKGYATEGSRICDLEDY 500


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