BLASTX nr result

ID: Coptis25_contig00017121 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00017121
         (841 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN76661.1| hypothetical protein VITISV_040451 [Vitis vinifera]   197   2e-48
emb|CBI19919.3| unnamed protein product [Vitis vinifera]              197   3e-48
ref|XP_002269837.1| PREDICTED: uncharacterized protein LOC100247...   197   3e-48
dbj|BAJ93924.1| predicted protein [Hordeum vulgare subsp. vulgar...   190   4e-46
ref|XP_004146224.1| PREDICTED: uncharacterized protein LOC101216...   189   5e-46

>emb|CAN76661.1| hypothetical protein VITISV_040451 [Vitis vinifera]
          Length = 130

 Score =  197 bits (501), Expect = 2e-48
 Identities = 89/102 (87%), Positives = 96/102 (94%)
 Frame = -3

Query: 491 GEFQYPWKEKLVKYKDELSKGVWGYWELGAWKPLGISGRRRARLRKEVLLAGQDWPYDPA 312
           GE+QYPW+EKL KYKDELSKGVWGYWELGAWKPLGISGRRRARLRKEVLLAG+DWPYDP 
Sbjct: 14  GEYQYPWREKLTKYKDELSKGVWGYWELGAWKPLGISGRRRARLRKEVLLAGEDWPYDPE 73

Query: 311 RKEMRTKRKGHKVDRVAAEKRANTAELMKKMPDMLLDYKKRR 186
           RKEMRTKRKGHK DR++AEKRA+TAELMK MP  LLDYKKR+
Sbjct: 74  RKEMRTKRKGHKCDRISAEKRAHTAELMKSMPQKLLDYKKRK 115


>emb|CBI19919.3| unnamed protein product [Vitis vinifera]
          Length = 166

 Score =  197 bits (500), Expect = 3e-48
 Identities = 89/102 (87%), Positives = 96/102 (94%)
 Frame = -3

Query: 491 GEFQYPWKEKLVKYKDELSKGVWGYWELGAWKPLGISGRRRARLRKEVLLAGQDWPYDPA 312
           GE+QYPW+EKL KYKDELSKGVWGYWELGAWKPLGISGRRRARLRKEVLLAG+DWPYDP 
Sbjct: 50  GEYQYPWREKLTKYKDELSKGVWGYWELGAWKPLGISGRRRARLRKEVLLAGEDWPYDPE 109

Query: 311 RKEMRTKRKGHKVDRVAAEKRANTAELMKKMPDMLLDYKKRR 186
           RKEMRTKRKGHK DR++AEKRA+TAELMK MP  LLDYKKR+
Sbjct: 110 RKEMRTKRKGHKCDRISAEKRAHTAELMKSMPQELLDYKKRK 151


>ref|XP_002269837.1| PREDICTED: uncharacterized protein LOC100247228 [Vitis vinifera]
          Length = 130

 Score =  197 bits (500), Expect = 3e-48
 Identities = 89/102 (87%), Positives = 96/102 (94%)
 Frame = -3

Query: 491 GEFQYPWKEKLVKYKDELSKGVWGYWELGAWKPLGISGRRRARLRKEVLLAGQDWPYDPA 312
           GE+QYPW+EKL KYKDELSKGVWGYWELGAWKPLGISGRRRARLRKEVLLAG+DWPYDP 
Sbjct: 14  GEYQYPWREKLTKYKDELSKGVWGYWELGAWKPLGISGRRRARLRKEVLLAGEDWPYDPE 73

Query: 311 RKEMRTKRKGHKVDRVAAEKRANTAELMKKMPDMLLDYKKRR 186
           RKEMRTKRKGHK DR++AEKRA+TAELMK MP  LLDYKKR+
Sbjct: 74  RKEMRTKRKGHKCDRISAEKRAHTAELMKSMPQELLDYKKRK 115


>dbj|BAJ93924.1| predicted protein [Hordeum vulgare subsp. vulgare]
           gi|326499664|dbj|BAJ86143.1| predicted protein [Hordeum
           vulgare subsp. vulgare] gi|326504896|dbj|BAK06739.1|
           predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 132

 Score =  190 bits (482), Expect = 4e-46
 Identities = 88/98 (89%), Positives = 91/98 (92%)
 Frame = -3

Query: 479 YPWKEKLVKYKDELSKGVWGYWELGAWKPLGISGRRRARLRKEVLLAGQDWPYDPARKEM 300
           YPWKEKL KYK ELSKGVWGYWELGAWKPLGISGR+RARLRKEVLLAG+DW YDP R EM
Sbjct: 19  YPWKEKLAKYKGELSKGVWGYWELGAWKPLGISGRQRARLRKEVLLAGEDWAYDPPRGEM 78

Query: 299 RTKRKGHKVDRVAAEKRANTAELMKKMPDMLLDYKKRR 186
           RTKRKGHKVDR+AAEKRANT ELMKKMP MLLDYKKRR
Sbjct: 79  RTKRKGHKVDRIAAEKRANTVELMKKMPQMLLDYKKRR 116


>ref|XP_004146224.1| PREDICTED: uncharacterized protein LOC101216182 [Cucumis sativus]
           gi|449515468|ref|XP_004164771.1| PREDICTED:
           uncharacterized protein LOC101227913 [Cucumis sativus]
          Length = 130

 Score =  189 bits (481), Expect = 5e-46
 Identities = 87/101 (86%), Positives = 92/101 (91%)
 Frame = -3

Query: 488 EFQYPWKEKLVKYKDELSKGVWGYWELGAWKPLGISGRRRARLRKEVLLAGQDWPYDPAR 309
           E+QYPW+EKL KYK+ELSKGVWGYWELGAWK LGIS R RARLRKEVLLAGQDWPYDP R
Sbjct: 15  EYQYPWQEKLAKYKNELSKGVWGYWELGAWKSLGISARHRARLRKEVLLAGQDWPYDPER 74

Query: 308 KEMRTKRKGHKVDRVAAEKRANTAELMKKMPDMLLDYKKRR 186
           KEMRTKRKGHK DR+AAEKR NTA LM+KMPDMLL YKKRR
Sbjct: 75  KEMRTKRKGHKCDRIAAEKRENTARLMEKMPDMLLQYKKRR 115


Top