BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00017120
         (1395 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002274515.2| PREDICTED: zinc finger CCCH domain-containin...   288   2e-75
emb|CBI38961.3| unnamed protein product [Vitis vinifera]              274   5e-71
ref|XP_004157135.1| PREDICTED: zinc finger CCCH domain-containin...   229   1e-57
ref|XP_004139162.1| PREDICTED: zinc finger CCCH domain-containin...   222   2e-55
ref|NP_001185401.1| zinc finger CCCH domain-containing protein 1...   213   1e-52

>ref|XP_002274515.2| PREDICTED: zinc finger CCCH domain-containing protein 16-like [Vitis
            vinifera]
          Length = 383

 Score =  288 bits (737), Expect = 2e-75
 Identities = 165/380 (43%), Positives = 210/380 (55%), Gaps = 18/380 (4%)
 Frame = +2

Query: 38   ETCRNFASGSCRFGDRCKFSH--------DIHTXXXXXXXXXXXXXXXXXXXXXXXXXXX 193
            E CRNF  GSC++G+RCKF H        ++                             
Sbjct: 6    EPCRNFQRGSCQYGERCKFLHVTQQQPKPNVSGFGAQTSSNFQHTNVQQQRSNPFGFGVQ 65

Query: 194  XXXXXXXXENTWTRGEPAGT---NVTKQPSNDQTPVSNHTCNDPESCKIIIVDDFKTERP 364
                    EN WTR  P  T   + + + S++Q   +NH C DPESCK  IV+DF+ ERP
Sbjct: 66   SNSLPKPFENKWTRFSPLTTGSSSSSSRQSDNQVQPANHKCTDPESCKRQIVEDFEHERP 125

Query: 365  IWKLTCYAHWRHLPCDIWGDVSYEELRAAAYDDAKKGLSLLSVVERERNMLNSKVMQFEN 544
            IWKLTCY H +  PCDI GD+SYEELR AAYDDA +GLSL S+VERER++LNSK+++F++
Sbjct: 126  IWKLTCYGHCKSAPCDIVGDISYEELRLAAYDDAGRGLSLQSIVERERSLLNSKLIEFDS 185

Query: 545  LQRNPYVISPNTTIGGAIPFPAINNSAFPAPVQKNAPPSVSSFSQLGIPTNQGSNTSVVA 724
            L R PY   PN+T+  AI  PA N  A     Q N PPS SSFSQL    N G  T    
Sbjct: 186  LLRKPYAAPPNSTL--AIQSPAPNPDASSLTAQNNTPPSASSFSQLSTSPNMGFGTRPST 243

Query: 725  STNSIFGQKSVPPVSTQPSGSFGSNNLTFGTQGLFGSQQHTQQQGN---GNASSF-NMPF 892
             +N+ FGQ +    S+Q SG+FG+NNL FG  G FGSQ   Q  G+    N + F +   
Sbjct: 244  PSNNAFGQSNSIQFSSQTSGAFGTNNLAFGNAGSFGSQLPVQMHGSPLPSNTAGFSHNNM 303

Query: 893  SSGKNNPTSFAGSFQSSDVAVNQSPVLSVGHNPPASLGGQTYVD---RSPEGVPAEMAIW 1063
            S+G    +  A S Q    A NQSP+LS G N   S     +        +    +M+IW
Sbjct: 304  SAGSKAFSPPAASPQIISFANNQSPILSSGTNSMFSAESTMHAQLEKMQRDNFSGDMSIW 363

Query: 1064 LKEKWNPGEIPEEAPPDSYV 1123
            LKE+WNPGEIPEE PPD++V
Sbjct: 364  LKEEWNPGEIPEEEPPDAFV 383


>emb|CBI38961.3| unnamed protein product [Vitis vinifera]
          Length = 394

 Score =  274 bits (700), Expect = 5e-71
 Identities = 151/312 (48%), Positives = 191/312 (61%), Gaps = 10/312 (3%)
 Frame = +2

Query: 218  ENTWTRGEPAGT---NVTKQPSNDQTPVSNHTCNDPESCKIIIVDDFKTERPIWKLTCYA 388
            EN WTR  P  T   + + + S++Q   +NH C DPESCK  IV+DF+ ERPIWKLTCY 
Sbjct: 85   ENKWTRFSPLTTGSSSSSSRQSDNQVQPANHKCTDPESCKRQIVEDFEHERPIWKLTCYG 144

Query: 389  HWRHLPCDIWGDVSYEELRAAAYDDAKKGLSLLSVVERERNMLNSKVMQFENLQRNPYVI 568
            H +  PCDI GD+SYEELR AAYDDA +GLSL S+VERER++LNSK+++F++L R PY  
Sbjct: 145  HCKSAPCDIVGDISYEELRLAAYDDAGRGLSLQSIVERERSLLNSKLIEFDSLLRKPYAA 204

Query: 569  SPNTTIGGAIPFPAINNSAFPAPVQKNAPPSVSSFSQLGIPTNQGSNTSVVASTNSIFGQ 748
             PN+T+  AI  PA N  A     Q N PPS SSFSQL    N G  T     +N+ FGQ
Sbjct: 205  PPNSTL--AIQSPAPNPDASSLTAQNNTPPSASSFSQLSTSPNMGFGTRPSTPSNNAFGQ 262

Query: 749  KSVPPVSTQPSGSFGSNNLTFGTQGLFGSQQHTQQQGN---GNASSF-NMPFSSGKNNPT 916
             +    S+Q SG+FG+NNL FG  G FGSQ   Q  G+    N + F +   S+G    +
Sbjct: 263  SNSIQFSSQTSGAFGTNNLAFGNAGSFGSQLPVQMHGSPLPSNTAGFSHNNMSAGSKAFS 322

Query: 917  SFAGSFQSSDVAVNQSPVLSVGHNPPASLGGQTYVD---RSPEGVPAEMAIWLKEKWNPG 1087
              A S Q    A NQSP+LS G N   S     +        +    +M+IWLKE+WNPG
Sbjct: 323  PPAASPQIISFANNQSPILSSGTNSMFSAESTMHAQLEKMQRDNFSGDMSIWLKEEWNPG 382

Query: 1088 EIPEEAPPDSYV 1123
            EIPEE PPD++V
Sbjct: 383  EIPEEEPPDAFV 394


>ref|XP_004157135.1| PREDICTED: zinc finger CCCH domain-containing protein 16-like
            [Cucumis sativus]
          Length = 360

 Score =  229 bits (584), Expect = 1e-57
 Identities = 138/365 (37%), Positives = 178/365 (48%), Gaps = 3/365 (0%)
 Frame = +2

Query: 38   ETCRNFASGSCRFGDRCKFSHDIHTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 217
            + CR+F  G+C++G+RCKF H                                       
Sbjct: 6    QPCRDFQRGTCQYGERCKFLHATQQAQQQKPNPFGFGVPNNGQSKAVADFGSKQNQYKPF 65

Query: 218  ENTWTR-GEPAGTNVTKQPSNDQTPVSNHTCNDPESCKIIIVDDFKTERPIWKLTCYAHW 394
            EN WTR   PAG   +++P N   P SNH C D ESCK  I +DF+ ERP+WKLTCY H 
Sbjct: 66   ENKWTRPSTPAGNAQSRKPDN-HLPSSNHKCTDGESCKRQIAEDFQNERPLWKLTCYGHN 124

Query: 395  RHLPCDIWGDVSYEELRAAAYDDAKKGLSLLSVVERERNMLNSKVMQFENLQRNPYVISP 574
            ++ PCDI GDVSYEELR  AYD+AK+G+SL S+VERERN+LNSK+ +FE L   PYV   
Sbjct: 125  KNEPCDIVGDVSYEELRTIAYDEAKRGISLQSIVERERNLLNSKLAEFEGLLLKPYVTPS 184

Query: 575  NTTIGGAIPFPAINNSAFPAPVQKNAPPSVSSFSQLGIPTNQGSNTSVVASTNSIFGQKS 754
            N   G    F   N+ +   P  +N  PS+SSFSQLG   N G         N++FGQ+ 
Sbjct: 185  NRAPGNQSSFSGTNSPSI-LPSAQNNTPSLSSFSQLGASLNTGFGARPSNPHNTVFGQQV 243

Query: 755  VPPVSTQPSGSFGSNNLTFGTQGLFGSQQHTQQQGNGNASSFNMPFSSGKNNPTSFAGSF 934
                  Q S  FG  N    +    G    +Q  GN         FS+        AGS 
Sbjct: 244  QFSSPVQNSSGFGMTNFPSTSVVAVGGGVGSQTFGN---------FSTLSGFDIKNAGSN 294

Query: 935  QSSDVAVNQSPVLSVGHNPPASL--GGQTYVDRSPEGVPAEMAIWLKEKWNPGEIPEEAP 1108
              S  A+   P  +   +    +    Q       E    ++ IW+KEKW PGEIPE AP
Sbjct: 295  IFSSAALTNLPPTNANSSASGQIAPNAQLVNKLQQENSSVDVDIWMKEKWVPGEIPEMAP 354

Query: 1109 PDSYV 1123
            PD+ +
Sbjct: 355  PDAVI 359


>ref|XP_004139162.1| PREDICTED: zinc finger CCCH domain-containing protein 16-like
            [Cucumis sativus]
          Length = 377

 Score =  222 bits (565), Expect = 2e-55
 Identities = 135/356 (37%), Positives = 172/356 (48%), Gaps = 3/356 (0%)
 Frame = +2

Query: 65   SCRFGDRCKFSHDIHTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXENTWTR-GE 241
            SC++G+RCKF H                                       EN WTR   
Sbjct: 32   SCQYGERCKFLHATQQAQQQKPNPFGFGVPNNGQSKAVADFGSKQNQYKPFENKWTRPST 91

Query: 242  PAGTNVTKQPSNDQTPVSNHTCNDPESCKIIIVDDFKTERPIWKLTCYAHWRHLPCDIWG 421
            P G   +++P N   P SNH C D ESCK  I +DF+ ERP+WKLTCY H ++ PCDI G
Sbjct: 92   PTGNAQSRKPDN-HLPSSNHKCTDGESCKRQIAEDFQNERPLWKLTCYGHNKNEPCDIVG 150

Query: 422  DVSYEELRAAAYDDAKKGLSLLSVVERERNMLNSKVMQFENLQRNPYVISPNTTIGGAIP 601
            DVSYEELR  AYD+AK+G+SL S+VERERN+LNSK+ +FE L   PYV   N   G    
Sbjct: 151  DVSYEELRTIAYDEAKRGISLQSIVERERNLLNSKLAEFEGLLLKPYVTPSNRAPGNQSS 210

Query: 602  FPAINNSAFPAPVQKNAPPSVSSFSQLGIPTNQGSNTSVVASTNSIFGQKSVPPVSTQPS 781
            F   N+ +   P  +N  PS+SSFSQLG   N G         N++FGQ+       Q S
Sbjct: 211  FSGTNSPSI-LPSAQNNTPSLSSFSQLGASLNTGFGARPSNPHNTVFGQQVQFSSPVQNS 269

Query: 782  GSFGSNNLTFGTQGLFGSQQHTQQQGNGNASSFNMPFSSGKNNPTSFAGSFQSSDVAVNQ 961
              FG  N    +    G    +Q  GN         FS+        AGS   S  A+  
Sbjct: 270  SGFGMTNFPSTSVVAVGGGVGSQTFGN---------FSTLSGFDIKNAGSNIFSSAALTN 320

Query: 962  SPVLSVGHNPPASL--GGQTYVDRSPEGVPAEMAIWLKEKWNPGEIPEEAPPDSYV 1123
             P  +   +    +    Q      PE    ++ IW+KEKW PGEIPE APPD+ +
Sbjct: 321  LPPTNANSSASGQIAPNAQLVNKLQPENSSVDVDIWMKEKWVPGEIPEMAPPDAVI 376


>ref|NP_001185401.1| zinc finger CCCH domain-containing protein 16 [Arabidopsis thaliana]
            gi|332197583|gb|AEE35704.1| zinc finger CCCH
            domain-containing protein 16 [Arabidopsis thaliana]
          Length = 398

 Score =  213 bits (542), Expect = 1e-52
 Identities = 128/318 (40%), Positives = 174/318 (54%), Gaps = 16/318 (5%)
 Frame = +2

Query: 218  ENTWTRGEPA----GTNVTKQPSNDQTPVSNHTCNDPESCKIIIVDDFKTERPIWKLTCY 385
            +NTW+R        G   + Q +  QT  ++H C DP +CK ++ DDFK ERP+WKLTCY
Sbjct: 92   QNTWSRTASTPTGGGAAASTQQTGKQTQPADHKCTDPAACKRVMQDDFKNERPMWKLTCY 151

Query: 386  AHWRHLPCDIWGDVSYEELRAAAYDDAKKGLSLLSVVERERNMLNSKVMQFENLQRNPYV 565
             HW++ PCD+ GD+SYEELRA AY++AK+G+ L S+VERERN+ NSK+ +FEN  RNPY 
Sbjct: 152  GHWKYFPCDVTGDISYEELRAVAYEEAKRGIPLQSIVERERNLQNSKIAEFENFLRNPY- 210

Query: 566  ISPNTTIGGAIPFPAINNSAFPAPVQKNAP-PSVSSFSQLGI--PTNQGSNTS-----VV 721
                +      PF A   S FP   Q N+P P+ S F+Q      TN G  +S       
Sbjct: 211  --KGSVTANQSPFAATTPSIFPQSSQINSPSPAFSGFNQQTAFSNTNAGGLSSSGPPNAF 268

Query: 722  ASTN---SIFGQKSVPPVSTQPSGSFGSNNLTFGTQGLFGSQQHTQQQGNGNASSFNMPF 892
            AS N   + F   +  PV + PSG F +N  T      FG        G G A++     
Sbjct: 269  ASFNKQPNAFSVNTPQPVPSGPSG-FQTNPSTTFKPASFG-------PGPGFATTPQNNN 320

Query: 893  SSGKNNPTSFAGSFQSSDVAVN-QSPVLSVGHNPPASLGGQTYVDRSPEGVPAEMAIWLK 1069
              G++ PT    + Q++  A N   PV S       +    +  +    G P + +IWLK
Sbjct: 321  IFGQSTPTPATNTSQNNQTAFNFNVPVASFTAPAINTTNTSSGTELQIGGDPVDSSIWLK 380

Query: 1070 EKWNPGEIPEEAPPDSYV 1123
            EKWNPGEIPE+APPD++V
Sbjct: 381  EKWNPGEIPEQAPPDAFV 398