BLASTX nr result

ID: Coptis25_contig00017119 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00017119
         (224 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002319763.1| predicted protein [Populus trichocarpa] gi|2...   134   1e-29
ref|XP_003548050.1| PREDICTED: uncharacterized deoxyribonuclease...   126   2e-27
emb|CAH66729.1| H0404F02.5 [Oryza sativa Indica Group] gi|218195...   125   5e-27
ref|NP_001053632.1| Os04g0577500 [Oryza sativa Japonica Group] g...   125   5e-27
ref|XP_002275929.2| PREDICTED: uncharacterized deoxyribonuclease...   123   1e-26

>ref|XP_002319763.1| predicted protein [Populus trichocarpa] gi|222858139|gb|EEE95686.1|
           predicted protein [Populus trichocarpa]
          Length = 308

 Score =  134 bits (336), Expect = 1e-29
 Identities = 60/74 (81%), Positives = 66/74 (89%)
 Frame = -1

Query: 224 VNGVSEKDWHLVKQMGEQYPSSVIPCFGLHPWYVAERSPNWFNILKDFFYSTPSATVGEI 45
           VNGVSEKDW+LVK+MGE YPS VIPCFGLHPW++ ER+PNWFN LK+FF  TPSA VGEI
Sbjct: 38  VNGVSEKDWNLVKEMGESYPS-VIPCFGLHPWFIEERTPNWFNTLKEFFQITPSAAVGEI 96

Query: 44  GLDKGSHGKTIDFN 3
           GLDKGSHGK IDFN
Sbjct: 97  GLDKGSHGKKIDFN 110


>ref|XP_003548050.1| PREDICTED: uncharacterized deoxyribonuclease sll1786-like [Glycine
           max]
          Length = 311

 Score =  126 bits (317), Expect = 2e-27
 Identities = 57/74 (77%), Positives = 64/74 (86%)
 Frame = -1

Query: 224 VNGVSEKDWHLVKQMGEQYPSSVIPCFGLHPWYVAERSPNWFNILKDFFYSTPSATVGEI 45
           VNGVSE+DWH VKQ+ E YPS VIPCFGLHPW+V ERSPNWF  LK++F STPSA VGEI
Sbjct: 37  VNGVSEQDWHSVKQLAETYPS-VIPCFGLHPWFVKERSPNWFQTLKEYFDSTPSAAVGEI 95

Query: 44  GLDKGSHGKTIDFN 3
           G+DKGSHGK IDF+
Sbjct: 96  GVDKGSHGKKIDFS 109


>emb|CAH66729.1| H0404F02.5 [Oryza sativa Indica Group] gi|218195414|gb|EEC77841.1|
           hypothetical protein OsI_17072 [Oryza sativa Indica
           Group]
          Length = 311

 Score =  125 bits (313), Expect = 5e-27
 Identities = 56/73 (76%), Positives = 62/73 (84%)
 Frame = -1

Query: 224 VNGVSEKDWHLVKQMGEQYPSSVIPCFGLHPWYVAERSPNWFNILKDFFYSTPSATVGEI 45
           VNG SEKDWHLVKQM E+YPS V+PCFGLHPW+V ERSP+W + L+ FF  TP A VGEI
Sbjct: 47  VNGTSEKDWHLVKQMAEEYPS-VVPCFGLHPWWVPERSPDWMDSLRRFFAETPEAAVGEI 105

Query: 44  GLDKGSHGKTIDF 6
           GLDKGSHGKTIDF
Sbjct: 106 GLDKGSHGKTIDF 118


>ref|NP_001053632.1| Os04g0577500 [Oryza sativa Japonica Group]
           gi|38345538|emb|CAD41308.2| OSJNBa0020J04.13 [Oryza
           sativa Japonica Group] gi|113565203|dbj|BAF15546.1|
           Os04g0577500 [Oryza sativa Japonica Group]
           gi|215692572|dbj|BAG87992.1| unnamed protein product
           [Oryza sativa Japonica Group]
           gi|215740781|dbj|BAG96937.1| unnamed protein product
           [Oryza sativa Japonica Group]
           gi|222629413|gb|EEE61545.1| hypothetical protein
           OsJ_15872 [Oryza sativa Japonica Group]
          Length = 311

 Score =  125 bits (313), Expect = 5e-27
 Identities = 56/73 (76%), Positives = 62/73 (84%)
 Frame = -1

Query: 224 VNGVSEKDWHLVKQMGEQYPSSVIPCFGLHPWYVAERSPNWFNILKDFFYSTPSATVGEI 45
           VNG SEKDWHLVKQM E+YPS V+PCFGLHPW+V ERSP+W + L+ FF  TP A VGEI
Sbjct: 47  VNGTSEKDWHLVKQMAEEYPS-VVPCFGLHPWWVPERSPDWMDSLRRFFAETPEAAVGEI 105

Query: 44  GLDKGSHGKTIDF 6
           GLDKGSHGKTIDF
Sbjct: 106 GLDKGSHGKTIDF 118


>ref|XP_002275929.2| PREDICTED: uncharacterized deoxyribonuclease YabD-like [Vitis
           vinifera]
          Length = 314

 Score =  123 bits (309), Expect = 1e-26
 Identities = 55/73 (75%), Positives = 63/73 (86%)
 Frame = -1

Query: 224 VNGVSEKDWHLVKQMGEQYPSSVIPCFGLHPWYVAERSPNWFNILKDFFYSTPSATVGEI 45
           VNGVSE DWHLVKQM + Y   V+PCFGLHPWYVAER+P WFN LKDFF++TP+ATVGEI
Sbjct: 40  VNGVSENDWHLVKQMSDTY-QCVVPCFGLHPWYVAERTPFWFNTLKDFFHATPAATVGEI 98

Query: 44  GLDKGSHGKTIDF 6
           GLDKGS G+ I+F
Sbjct: 99  GLDKGSRGREINF 111


Top