BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00017108
         (439 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_001780765.1| predicted protein [Physcomitrella patens sub...    52   3e-14
ref|YP_001550173.1| hypothetical protein P9211_02881 [Prochloroc...    49   5e-12
ref|NP_874687.1| hypothetical protein Pro0293 [Prochlorococcus m...    48   3e-10
ref|YP_001090508.1| hypothetical protein P9301_02841 [Prochloroc...    47   5e-10
ref|YP_007094421.1| integral membrane protein MviN [Chroococcidi...    45   5e-10

>ref|XP_001780765.1| predicted protein [Physcomitrella patens subsp. patens]
           gi|162667783|gb|EDQ54404.1| predicted protein
           [Physcomitrella patens subsp. patens]
          Length = 761

 Score = 52.4 bits (124), Expect(2) = 3e-14
 Identities = 27/59 (45%), Positives = 39/59 (66%)
 Frame = +1

Query: 235 RHISLL*QLKLMIPCVVFSGPVGLGFGYLSAEGDSFVACISPALSSVLIITMCVAYVSI 411
           R I+++ QLK+M PC + +  +GLGFG LSA G   +  +SPALSS+ I+     +VSI
Sbjct: 309 RRIAII-QLKMMAPCALLAALIGLGFGTLSANGIFGIPSLSPALSSISILAAVALHVSI 366



 Score = 50.8 bits (120), Expect(2) = 3e-14
 Identities = 29/69 (42%), Positives = 38/69 (55%)
 Frame = +3

Query: 3   GGVNGPLHLTMATTLSKLSKERGRKLIQKTSLLMFLIGSVAGVLIYLFAESIIYVSAPGW 182
           GG+NGP H  M   LSK  KE G+KL+   SLL  L  +   +LI+L A  +I   APG 
Sbjct: 240 GGINGPFHSAMTAALSKRRKEDGQKLLTSVSLLSGLACTGFSILIFLNAGLLIDTLAPGL 299

Query: 183 KLGVYPIIT 209
            +    I+T
Sbjct: 300 LVAADGILT 308


>ref|YP_001550173.1| hypothetical protein P9211_02881 [Prochlorococcus marinus str. MIT
           9211] gi|159888005|gb|ABX08219.1| Uncharacterized
           membrane protein, putative virulence factor
           [Prochlorococcus marinus str. MIT 9211]
          Length = 535

 Score = 49.3 bits (116), Expect(2) = 5e-12
 Identities = 23/69 (33%), Positives = 41/69 (59%)
 Frame = +3

Query: 3   GGVNGPLHLTMATTLSKLSKERGRKLIQKTSLLMFLIGSVAGVLIYLFAESIIYVSAPGW 182
           GG+NGPLH ++ T LS+ SK+    ++   + L+ L+  +  +++++ A+ II V  PG 
Sbjct: 58  GGINGPLHNSIVTVLSRSSKKEKAYILSSINTLISLLLIIISIILFIAADPIIKVIGPGL 117

Query: 183 KLGVYPIIT 209
            L  + I T
Sbjct: 118 SLETHEIAT 126



 Score = 46.2 bits (108), Expect(2) = 5e-12
 Identities = 22/61 (36%), Positives = 38/61 (62%)
 Frame = +1

Query: 256 QLKLMIPCVVFSGPVGLGFGYLSAEGDSFVACISPALSSVLIITMCVAYVSIRGTTTSYV 435
           QL++M P ++FSG +G+ FG L+A  + F+  ISP +SS+++I    ++    G T   V
Sbjct: 128 QLEIMSPILLFSGLIGISFGALNATNEFFLPSISPIISSIVLIIFSGSFWIYYGPTKDSV 187

Query: 436 D 438
           +
Sbjct: 188 E 188


>ref|NP_874687.1| hypothetical protein Pro0293 [Prochlorococcus marinus subsp.
           marinus str. CCMP1375] gi|33237270|gb|AAP99339.1|
           Uncharacterized membrane protein [Prochlorococcus
           marinus subsp. marinus str. CCMP1375]
          Length = 538

 Score = 47.8 bits (112), Expect(2) = 3e-10
 Identities = 22/52 (42%), Positives = 34/52 (65%)
 Frame = +1

Query: 229 NLRHISLL*QLKLMIPCVVFSGPVGLGFGYLSAEGDSFVACISPALSSVLII 384
           N  H+  + QLK+M P  +F+G +G+GFG L+A    F+  ISP +SS+ +I
Sbjct: 119 NSTHLIAVKQLKIMSPITLFAGLIGIGFGSLNARDKFFIPSISPIISSLALI 170



 Score = 41.6 bits (96), Expect(2) = 3e-10
 Identities = 19/59 (32%), Positives = 34/59 (57%)
 Frame = +3

Query: 3   GGVNGPLHLTMATTLSKLSKERGRKLIQKTSLLMFLIGSVAGVLIYLFAESIIYVSAPG 179
           GG+NGPLH  + T LS+ S++ G  ++   +  +  +  +    ++L A+SII +  PG
Sbjct: 58  GGINGPLHNAVVTVLSRRSQKEGEYIMGSINTSIIFVFILISGFLFLGADSIIQLVGPG 116


>ref|YP_001090508.1| hypothetical protein P9301_02841 [Prochlorococcus marinus str. MIT
           9301] gi|126542665|gb|ABO16907.1| Uncharacterized
           membrane protein, putative virulence factor
           [Prochlorococcus marinus str. MIT 9301]
          Length = 527

 Score = 47.0 bits (110), Expect(2) = 5e-10
 Identities = 21/43 (48%), Positives = 32/43 (74%)
 Frame = +1

Query: 256 QLKLMIPCVVFSGPVGLGFGYLSAEGDSFVACISPALSSVLII 384
           QLK++ PC+  SG +GL FG L+++   F++ ISPA++SV II
Sbjct: 128 QLKILTPCIPLSGFIGLSFGALNSQRKFFLSSISPAITSVTII 170



 Score = 41.6 bits (96), Expect(2) = 5e-10
 Identities = 21/70 (30%), Positives = 38/70 (54%)
 Frame = +3

Query: 3   GGVNGPLHLTMATTLSKLSKERGRKLIQKTSLLMFLIGSVAGVLIYLFAESIIYVSAPGW 182
           GG+NGPLH  +   L+ L+K+ G  ++ + S+ + ++  +  VLIY  +  +I + AP  
Sbjct: 58  GGINGPLHNAVVAVLTPLNKKNGGIVLTQVSIKLSILLLILAVLIYSNSSLLIDLLAPNL 117

Query: 183 KLGVYPIITF 212
                 I T+
Sbjct: 118 SYEAKSIATY 127


>ref|YP_007094421.1| integral membrane protein MviN [Chroococcidiopsis thermalis PCC
           7203] gi|428011989|gb|AFY90552.1| integral membrane
           protein MviN [Chroococcidiopsis thermalis PCC 7203]
          Length = 533

 Score = 45.1 bits (105), Expect(2) = 5e-10
 Identities = 19/58 (32%), Positives = 35/58 (60%)
 Frame = +3

Query: 3   GGVNGPLHLTMATTLSKLSKERGRKLIQKTSLLMFLIGSVAGVLIYLFAESIIYVSAP 176
           GGVNGP+H T+ + L K SK+    L++  + L+  +  +  + ++L A+ +IY+  P
Sbjct: 63  GGVNGPIHTTIVSILEKRSKQEAAPLVESITTLVSGVLLLVSIALFLSADGLIYLVGP 120



 Score = 43.5 bits (101), Expect(2) = 5e-10
 Identities = 21/63 (33%), Positives = 38/63 (60%), Gaps = 1/63 (1%)
 Frame = +1

Query: 226 SNLRHISLL*QLKLMIPCVVFSGPVGLGFGYLSAEGDSFVACISPALSSV-LIITMCVAY 402
           S   H     QL++M P ++ SG +G+GFG L+     ++  +SP LSS+ +I+ + + Y
Sbjct: 123 SQTAHAIAAEQLRIMSPMILLSGLIGIGFGTLNTANQYWLLSLSPVLSSITIILGLGILY 182

Query: 403 VSI 411
           +S+
Sbjct: 183 LSV 185