BLASTX nr result
ID: Coptis25_contig00017105
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis25_contig00017105
(1282 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002271877.1| PREDICTED: UPF0392 protein RCOM_0530710-like... 507 e-141
ref|XP_003613466.1| hypothetical protein MTR_5g037020 [Medicago ... 471 e-130
ref|XP_002520193.1| ubiquitin-protein ligase, putative [Ricinus ... 463 e-128
ref|XP_004168836.1| PREDICTED: UPF0392 protein RCOM_0530710-like... 461 e-127
ref|XP_004135216.1| PREDICTED: UPF0392 protein RCOM_0530710-like... 461 e-127
>ref|XP_002271877.1| PREDICTED: UPF0392 protein RCOM_0530710-like [Vitis vinifera]
Length = 601
Score = 507 bits (1306), Expect = e-141
Identities = 239/354 (67%), Positives = 282/354 (79%), Gaps = 5/354 (1%)
Frame = -3
Query: 1280 RMLPARATGARVTIGVPSHRHILTRSQSHRRAGLRGSSKFSSRRLPSVAKLIDSNSRGT- 1104
RM P++A G RVT+G+ SH H R+ +H +PSVAK+ S +
Sbjct: 258 RMNPSKAHGIRVTVGLNSHFHANARASNHVL-------------VPSVAKMSSPKSYNSY 304
Query: 1103 ----DSKKHELCVCTMVWNQASSLREWIAYHAWLGVERWFIYDNNSEDNIKEVVKKLEQE 936
+ K++LCVCTMVWNQASSLREWI YHAWLGVERWFIYDNNS+D KEV+++LE E
Sbjct: 305 KHKKNQGKYQLCVCTMVWNQASSLREWIMYHAWLGVERWFIYDNNSDDRTKEVIQELELE 364
Query: 935 NYNVSRHVWPWIKTQEAGFSHCALEAKNECKWVGFIDVDEYFYFPVPITHRHPKEEFGYP 756
+YNV+RH WPWIKTQEAGFSHCAL A++EC WVGF+DVDE+FYFP P THR + +
Sbjct: 365 DYNVTRHTWPWIKTQEAGFSHCALRARDECNWVGFMDVDEFFYFPFP-THRRGSNKLIFR 423
Query: 755 GRNSLRTMVAEYSNSTTIGEIRTTCHSFGPSGLTRMPSRGVTVGYTCRLQSPERHKSIIR 576
G+NSLRT+VA +S STTIGEIRT CHS+GPSGL +PS+GVTVGYTCRLQSPERHKSI+R
Sbjct: 424 GQNSLRTLVANFS-STTIGEIRTACHSYGPSGLNSLPSQGVTVGYTCRLQSPERHKSIVR 482
Query: 575 PDALDDTLLTVVHHFHLKPGYKYFNLPQSTALINHYKYQVWESFKAKFSRRVATYVADWQ 396
PD LD TLL VVHHF L+ G+KY NLPQST +INHYKYQVWE+F+AKF RRVATYVADWQ
Sbjct: 483 PDVLDRTLLNVVHHFRLRKGFKYLNLPQSTGVINHYKYQVWEAFRAKFFRRVATYVADWQ 542
Query: 395 ENQNEGSKDRAPGLGTEAIEPPNWSRRFCEVWDTGLRDFIMSNLANQDSGLLPW 234
E +NEGSKDRAPGLGTEAIEPP W +FCEVWDTGLRDF+++NLA+ +GLLPW
Sbjct: 543 EKENEGSKDRAPGLGTEAIEPPKWPLQFCEVWDTGLRDFVLANLADPTTGLLPW 596
>ref|XP_003613466.1| hypothetical protein MTR_5g037020 [Medicago truncatula]
gi|355514801|gb|AES96424.1| hypothetical protein
MTR_5g037020 [Medicago truncatula]
Length = 601
Score = 471 bits (1211), Expect = e-130
Identities = 224/349 (64%), Positives = 265/349 (75%), Gaps = 3/349 (0%)
Frame = -3
Query: 1271 PARATGARVTIGVPSHRHILTRSQSHRRAGLRGSSKFSSRRLPSVAKLID-SNSRGTDSK 1095
P +A G RVT+ SH LR + LPSVA++ S+ R + +
Sbjct: 264 PEKARGVRVTV-------------SHLSGNLRHPVR---TLLPSVARIGGGSDYRKKNGE 307
Query: 1094 KHELCVCTMVWNQASSLREWIAYHAWLGVERWFIYDNNSEDNIKEVVKKLEQENYNVSRH 915
K ELCVCTMVWNQ +LREWI YH+WLGVERWFIYDNNS+D+I++V+ L+ E YNVSR
Sbjct: 308 KFELCVCTMVWNQGYALREWIMYHSWLGVERWFIYDNNSDDDIEKVINDLDSEGYNVSRK 367
Query: 914 VWPWIKTQEAGFSHCALEAKNECKWVGFIDVDEYFYFPVPITHRHPKE--EFGYPGRNSL 741
VWPWIKTQEAGFSHCAL+A+ ECKWVGF DVDE+FYFP E G PG SL
Sbjct: 368 VWPWIKTQEAGFSHCALKAREECKWVGFFDVDEFFYFPNEFRRNKIGEGSSSGVPGEKSL 427
Query: 740 RTMVAEYSNSTTIGEIRTTCHSFGPSGLTRMPSRGVTVGYTCRLQSPERHKSIIRPDALD 561
R+MVA +S+STTI EIRTTCHSFGPSGL P +GVT+GYTCRLQSPERHKSI+RPD LD
Sbjct: 428 RSMVANFSSSTTIAEIRTTCHSFGPSGLNSKPKQGVTIGYTCRLQSPERHKSIVRPDMLD 487
Query: 560 DTLLTVVHHFHLKPGYKYFNLPQSTALINHYKYQVWESFKAKFSRRVATYVADWQENQNE 381
+LL VVHHF LK GY Y+N+P+ +A++NHYKYQVWESFK KF RRVATYVADWQE+QN+
Sbjct: 488 TSLLNVVHHFQLKEGYDYYNMPEGSAIVNHYKYQVWESFKQKFYRRVATYVADWQEDQNK 547
Query: 380 GSKDRAPGLGTEAIEPPNWSRRFCEVWDTGLRDFIMSNLANQDSGLLPW 234
GSKDRAPGLGTEAIEP NW RFCEVWDTGL+D+++S A+ +GL+PW
Sbjct: 548 GSKDRAPGLGTEAIEPDNWRLRFCEVWDTGLKDYLLSYFAHPVTGLMPW 596
>ref|XP_002520193.1| ubiquitin-protein ligase, putative [Ricinus communis]
gi|325530317|sp|B9S2H4.1|Y232_RICCO RecName: Full=UPF0392
protein RCOM_0530710 gi|223540685|gb|EEF42248.1|
ubiquitin-protein ligase, putative [Ricinus communis]
Length = 578
Score = 463 bits (1191), Expect = e-128
Identities = 221/348 (63%), Positives = 266/348 (76%), Gaps = 2/348 (0%)
Frame = -3
Query: 1271 PARATGARVTIGVPSHRHILTRSQSHRRAGLRGSSKFSSRRLPSVAKLIDSNS--RGTDS 1098
P +A G RVT+ S AG G LPSVAK+ + S + ++
Sbjct: 250 PVKAQGIRVTV-------------SRINAGEDGVDA----PLPSVAKVYGAKSYEKRSNR 292
Query: 1097 KKHELCVCTMVWNQASSLREWIAYHAWLGVERWFIYDNNSEDNIKEVVKKLEQENYNVSR 918
K+ELC CTM+WNQAS L EWI YHAWLGV+RWFIYDNNS+D I+EVV +L +NYNV+R
Sbjct: 293 GKYELCACTMLWNQASFLHEWITYHAWLGVQRWFIYDNNSDDGIQEVVDELNLQNYNVTR 352
Query: 917 HVWPWIKTQEAGFSHCALEAKNECKWVGFIDVDEYFYFPVPITHRHPKEEFGYPGRNSLR 738
H WPWIK QEAGFSHCAL A++ECKW+GF DVDE+FY P RH ++ G NSLR
Sbjct: 353 HSWPWIKAQEAGFSHCALRARSECKWLGFFDVDEFFYLP-----RHRGQDM--LGENSLR 405
Query: 737 TMVAEYSNSTTIGEIRTTCHSFGPSGLTRMPSRGVTVGYTCRLQSPERHKSIIRPDALDD 558
T+VA YS+S+T EIRT CHSFGPSGLT PS+GVTVGYTCRLQ+PERHKSI+RP+ LD
Sbjct: 406 TLVANYSDSSTYAEIRTICHSFGPSGLTSAPSQGVTVGYTCRLQAPERHKSIVRPELLDT 465
Query: 557 TLLTVVHHFHLKPGYKYFNLPQSTALINHYKYQVWESFKAKFSRRVATYVADWQENQNEG 378
TLL VVHHF LK GY+Y N+P+STA++NHYKYQVW++FKAKF RRV+TYVA+WQE+QN+G
Sbjct: 466 TLLNVVHHFKLKEGYRYLNVPESTAVVNHYKYQVWDTFKAKFFRRVSTYVANWQEDQNQG 525
Query: 377 SKDRAPGLGTEAIEPPNWSRRFCEVWDTGLRDFIMSNLANQDSGLLPW 234
SKDRAPGLGT AIEPP+W RFCEVWDTGL+DF+++N A+ SG LPW
Sbjct: 526 SKDRAPGLGTVAIEPPDWRLRFCEVWDTGLKDFVLANFADTASGYLPW 573
>ref|XP_004168836.1| PREDICTED: UPF0392 protein RCOM_0530710-like [Cucumis sativus]
Length = 598
Score = 461 bits (1186), Expect = e-127
Identities = 212/311 (68%), Positives = 254/311 (81%), Gaps = 6/311 (1%)
Frame = -3
Query: 1148 LPSVAKLIDS--NSRGTDSKKHELCVCTMVWNQASSLREWIAYHAWLGVERWFIYDNNSE 975
LPSVA+L DS + + +KHELCVCTMVWNQA++LREWI YHAWLGV RWFIYDNNS+
Sbjct: 286 LPSVARLFDSRLSDLQRNQEKHELCVCTMVWNQAAALREWIMYHAWLGVGRWFIYDNNSD 345
Query: 974 DNIKEVVKKLEQENYNVSRHVWPWIKTQEAGFSHCALEAKNECKWVGFIDVDEYFYFPVP 795
DNI+++V++L E+YN+SR WPW+KTQEAGFSHCAL A++ECKWVGF DVDE+FYFP
Sbjct: 346 DNIEKIVRELNLEDYNISRLTWPWLKTQEAGFSHCALRARDECKWVGFFDVDEFFYFPSK 405
Query: 794 ITHRHPKEEFGYPGRNSLRTMVAEYS----NSTTIGEIRTTCHSFGPSGLTRMPSRGVTV 627
H+ E+ GRN+L +++AE S NSTTI EIRT CHSFGPSGLT P +GVT+
Sbjct: 406 YRHQR---EYHTAGRNALHSLIAESSASSSNSTTIAEIRTACHSFGPSGLTSHPPQGVTM 462
Query: 626 GYTCRLQSPERHKSIIRPDALDDTLLTVVHHFHLKPGYKYFNLPQSTALINHYKYQVWES 447
GYTCRLQSPERHKS +RPD LD TLL +VHHF LK G+ +F++P+S A+INHYKYQVWE+
Sbjct: 463 GYTCRLQSPERHKSFVRPDLLDITLLNIVHHFRLKRGFGFFDVPKSNAVINHYKYQVWET 522
Query: 446 FKAKFSRRVATYVADWQENQNEGSKDRAPGLGTEAIEPPNWSRRFCEVWDTGLRDFIMSN 267
F+AKF RRVATYV DWQE QNEGSKDRAPGLGTEAIEPPNW +FCEVWDTGLRDF+ +
Sbjct: 523 FRAKFFRRVATYVVDWQEAQNEGSKDRAPGLGTEAIEPPNWRLQFCEVWDTGLRDFVQTL 582
Query: 266 LANQDSGLLPW 234
++ +G LPW
Sbjct: 583 FSDPLTGYLPW 593
>ref|XP_004135216.1| PREDICTED: UPF0392 protein RCOM_0530710-like [Cucumis sativus]
Length = 598
Score = 461 bits (1186), Expect = e-127
Identities = 212/311 (68%), Positives = 254/311 (81%), Gaps = 6/311 (1%)
Frame = -3
Query: 1148 LPSVAKLIDS--NSRGTDSKKHELCVCTMVWNQASSLREWIAYHAWLGVERWFIYDNNSE 975
LPSVA+L DS + + +KHELCVCTMVWNQA++LREWI YHAWLGV RWFIYDNNS+
Sbjct: 286 LPSVARLFDSKLSDLQRNQEKHELCVCTMVWNQAAALREWIMYHAWLGVGRWFIYDNNSD 345
Query: 974 DNIKEVVKKLEQENYNVSRHVWPWIKTQEAGFSHCALEAKNECKWVGFIDVDEYFYFPVP 795
DNI+++V++L E+YN+SR WPW+KTQEAGFSHCAL A++ECKWVGF DVDE+FYFP
Sbjct: 346 DNIEKIVRELNLEDYNISRLTWPWLKTQEAGFSHCALRARDECKWVGFFDVDEFFYFPSK 405
Query: 794 ITHRHPKEEFGYPGRNSLRTMVAEYS----NSTTIGEIRTTCHSFGPSGLTRMPSRGVTV 627
H+ E+ GRN+L +++AE S NSTTI EIRT CHSFGPSGLT P +GVT+
Sbjct: 406 YRHQR---EYHTAGRNALHSLIAESSASSSNSTTIAEIRTACHSFGPSGLTSHPPQGVTM 462
Query: 626 GYTCRLQSPERHKSIIRPDALDDTLLTVVHHFHLKPGYKYFNLPQSTALINHYKYQVWES 447
GYTCRLQSPERHKS +RPD LD TLL +VHHF LK G+ +F++P+S A+INHYKYQVWE+
Sbjct: 463 GYTCRLQSPERHKSFVRPDLLDITLLNIVHHFRLKRGFGFFDVPKSNAVINHYKYQVWET 522
Query: 446 FKAKFSRRVATYVADWQENQNEGSKDRAPGLGTEAIEPPNWSRRFCEVWDTGLRDFIMSN 267
F+AKF RRVATYV DWQE QNEGSKDRAPGLGTEAIEPPNW +FCEVWDTGLRDF+ +
Sbjct: 523 FRAKFFRRVATYVVDWQEAQNEGSKDRAPGLGTEAIEPPNWRLQFCEVWDTGLRDFVQTL 582
Query: 266 LANQDSGLLPW 234
++ +G LPW
Sbjct: 583 FSDPLTGYLPW 593