BLASTX nr result

ID: Coptis25_contig00017098 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00017098
         (642 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002329429.1| predicted protein [Populus trichocarpa] gi|2...   170   2e-40
ref|XP_002329428.1| predicted protein [Populus trichocarpa] gi|2...   170   2e-40
emb|CBI36563.3| unnamed protein product [Vitis vinifera]              165   6e-39
ref|XP_002274466.1| PREDICTED: probable leucine-rich repeat rece...   165   6e-39
ref|XP_003634868.1| PREDICTED: probable LRR receptor-like serine...   165   8e-39

>ref|XP_002329429.1| predicted protein [Populus trichocarpa] gi|222870479|gb|EEF07610.1|
            predicted protein [Populus trichocarpa]
          Length = 841

 Score =  170 bits (431), Expect = 2e-40
 Identities = 86/168 (51%), Positives = 114/168 (67%), Gaps = 5/168 (2%)
 Frame = -2

Query: 641  RDISSKNILLNSKYNACVADFGIARILVPDSSNWTAPAGTYGYLAPELAFTMRLTAKCDV 462
            RDISS NILL+ KY A V+DFG AR++  DSSNWT  AGTYGY+APELA+TM++T KCDV
Sbjct: 665  RDISSSNILLDRKYEARVSDFGTARLIKLDSSNWTGLAGTYGYIAPELAYTMKVTEKCDV 724

Query: 461  YSFGVLALEVVMGNHPGEXXXXXXXXXXXXXSN----ALLMDILDKRLQPPTTELVKEVL 294
            YSFGV+ALE++MG+HPGE              N     LL D+LDKRL+ P  EL  +V 
Sbjct: 725  YSFGVVALEIIMGHHPGELIGSLSTLSTSSEWNPGSTTLLKDLLDKRLETPARELAVQVA 784

Query: 293  VSAKMAFSCVNVSPESRPTMDCVSRKLESCEFSLVE-PFHMITVEQLL 153
            +  K+ F+C+N  P+SRPTM  VS++L      +   P+H +T+ +L+
Sbjct: 785  IIIKLGFTCINADPKSRPTMPQVSQELSISRLDISSAPWHTLTLGELV 832


>ref|XP_002329428.1| predicted protein [Populus trichocarpa] gi|222870478|gb|EEF07609.1|
           predicted protein [Populus trichocarpa]
          Length = 306

 Score =  170 bits (431), Expect = 2e-40
 Identities = 86/168 (51%), Positives = 114/168 (67%), Gaps = 5/168 (2%)
 Frame = -2

Query: 641 RDISSKNILLNSKYNACVADFGIARILVPDSSNWTAPAGTYGYLAPELAFTMRLTAKCDV 462
           RDISS NILL+ KY A V+DFG AR++  DSSNWT  AGTYGY+APELA+TM++T KCDV
Sbjct: 130 RDISSSNILLDRKYEARVSDFGTARLIKLDSSNWTGLAGTYGYIAPELAYTMKVTEKCDV 189

Query: 461 YSFGVLALEVVMGNHPGEXXXXXXXXXXXXXSN----ALLMDILDKRLQPPTTELVKEVL 294
           YSFGV+ALE++MG+HPGE              N     LL D+LDKRL+ P  EL  +V 
Sbjct: 190 YSFGVVALEIIMGHHPGELIGSLSTLSTSSEWNPGSTTLLKDLLDKRLETPARELAVQVA 249

Query: 293 VSAKMAFSCVNVSPESRPTMDCVSRKLESCEFSLVE-PFHMITVEQLL 153
           +  K+ F+C+N  P+SRPTM  VS++L      +   P+H +T+ +L+
Sbjct: 250 IIIKLGFTCINADPKSRPTMPQVSQELSISRLDISSAPWHTLTLGELV 297


>emb|CBI36563.3| unnamed protein product [Vitis vinifera]
          Length = 901

 Score =  165 bits (418), Expect = 6e-39
 Identities = 86/169 (50%), Positives = 116/169 (68%), Gaps = 5/169 (2%)
 Frame = -2

Query: 641  RDISSKNILLNSKYNACVADFGIARILVPDSSNWTAPAGTYGYLAPELAFTMRLTAKCDV 462
            RDISS N+LL+S+Y A ++DFG AR+L PDSSNWT+ AGT GY APELA+T ++ AK DV
Sbjct: 727  RDISSNNVLLDSEYEAHISDFGTARLLKPDSSNWTSFAGTSGYTAPELAYTAKVDAKSDV 786

Query: 461  YSFGVLALEVVMGNHPGE-----XXXXXXXXXXXXXSNALLMDILDKRLQPPTTELVKEV 297
            YSFGV+ LEV+MG HPGE                   + LLMD+LD RL PP  ++ +EV
Sbjct: 787  YSFGVVTLEVIMGRHPGELVSSLLSMASSSSSPSRVYHLLLMDVLDHRLSPPVHQVSEEV 846

Query: 296  LVSAKMAFSCVNVSPESRPTMDCVSRKLESCEFSLVEPFHMITVEQLLG 150
            +   K+AF+C++ +P+ RPTM+ V +KL +    L +PF MIT+ +LLG
Sbjct: 847  VHIVKIAFACLHANPQCRPTMEQVYQKLSNQWPPLSKPFSMITLGELLG 895


>ref|XP_002274466.1| PREDICTED: probable leucine-rich repeat receptor-like protein kinase
            At1g35710-like [Vitis vinifera]
          Length = 1319

 Score =  165 bits (418), Expect = 6e-39
 Identities = 86/169 (50%), Positives = 116/169 (68%), Gaps = 5/169 (2%)
 Frame = -2

Query: 641  RDISSKNILLNSKYNACVADFGIARILVPDSSNWTAPAGTYGYLAPELAFTMRLTAKCDV 462
            RDISS N+LL+S+Y A ++DFG AR+L PDSSNWT+ AGT GY APELA+T ++ AK DV
Sbjct: 1145 RDISSNNVLLDSEYEAHISDFGTARLLKPDSSNWTSFAGTSGYTAPELAYTAKVDAKSDV 1204

Query: 461  YSFGVLALEVVMGNHPGE-----XXXXXXXXXXXXXSNALLMDILDKRLQPPTTELVKEV 297
            YSFGV+ LEV+MG HPGE                   + LLMD+LD RL PP  ++ +EV
Sbjct: 1205 YSFGVVTLEVIMGRHPGELVSSLLSMASSSSSPSRVYHLLLMDVLDHRLSPPVHQVSEEV 1264

Query: 296  LVSAKMAFSCVNVSPESRPTMDCVSRKLESCEFSLVEPFHMITVEQLLG 150
            +   K+AF+C++ +P+ RPTM+ V +KL +    L +PF MIT+ +LLG
Sbjct: 1265 VHIVKIAFACLHANPQCRPTMEQVYQKLSNQWPPLSKPFSMITLGELLG 1313


>ref|XP_003634868.1| PREDICTED: probable LRR receptor-like serine/threonine-protein kinase
            At4g08850-like [Vitis vinifera]
          Length = 855

 Score =  165 bits (417), Expect = 8e-39
 Identities = 85/172 (49%), Positives = 115/172 (66%), Gaps = 6/172 (3%)
 Frame = -2

Query: 641  RDISSKNILLNSKYNACVADFGIARILVPDSSNWTAPAGTYGYLAPELAFTMRLTAKCDV 462
            RDISS N+LL+S+Y A V+DFG AR+L  DSSNWT+ AGT+GY APELA+TM++  K DV
Sbjct: 683  RDISSNNVLLDSEYEAHVSDFGTARLLKLDSSNWTSFAGTFGYTAPELAYTMKVDNKTDV 742

Query: 461  YSFGVLALEVVMGNHPGE------XXXXXXXXXXXXXSNALLMDILDKRLQPPTTELVKE 300
            YSFGV+ LEV+MG HPGE                    + LL D++D+R  PP  +L +E
Sbjct: 743  YSFGVVTLEVIMGKHPGELISSLLWSASSSSSSPSTVDHRLLNDVMDQRPSPPVNQLAEE 802

Query: 299  VLVSAKMAFSCVNVSPESRPTMDCVSRKLESCEFSLVEPFHMITVEQLLGEE 144
            ++   K+AF+C+ V+P+SRPTM  V R L +    L +PF MIT+ +LLG +
Sbjct: 803  IVAVVKLAFACLRVNPQSRPTMQQVGRALSTQWPPLSKPFSMITLGELLGHD 854


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