BLASTX nr result

ID: Coptis25_contig00017094 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00017094
         (711 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002264797.2| PREDICTED: uncharacterized protein LOC100262...    99   9e-19
emb|CBI18230.3| unnamed protein product [Vitis vinifera]               86   1e-14
gb|ADZ28106.1| ethylene response factor 3 [Malus x domestica]          65   1e-08
ref|XP_002524310.1| conserved hypothetical protein [Ricinus comm...    59   1e-06
ref|XP_002278226.1| PREDICTED: ethylene-responsive transcription...    58   2e-06

>ref|XP_002264797.2| PREDICTED: uncharacterized protein LOC100262406 [Vitis vinifera]
           gi|147834261|emb|CAN66025.1| hypothetical protein
           VITISV_028773 [Vitis vinifera]
          Length = 421

 Score = 99.0 bits (245), Expect = 9e-19
 Identities = 75/205 (36%), Positives = 85/205 (41%), Gaps = 22/205 (10%)
 Frame = -1

Query: 711 WLGXXXXXXXXXXXXXXXXXXFRGSRAKLNFPENVRLLPPLPVSPATHFITSDSPATLLP 532
           WLG                  FRG+RAKLNFPENVRL+PPL VSPAT    S  PAT LP
Sbjct: 227 WLGTFDTAEAAARAYDEAALRFRGNRAKLNFPENVRLMPPLQVSPATQLSISGPPATQLP 286

Query: 531 VSQAAQPFXXXXXXXXXXXXXXXXXXDITRDYIQYXXXXXXXSDFQ-RQPTSLLEQMFY- 358
           VS +  PF                  DI RDY +Y        DF  +QPTSLLEQMFY 
Sbjct: 287 VSSSPPPF---------FQGQALQNPDIVRDYWEYSQLLQSSGDFHGQQPTSLLEQMFYS 337

Query: 357 --------------------XXXXXXXXXXXXXXXXXXXXSFPLLYSDQQFMTYFPAPEN 238
                                                    +PLL+ +QQ M Y   P N
Sbjct: 338 QSLASLQSSASLSSPSISFSSSSSSSSTSSLSSRFSSSSTPYPLLFPEQQ-MGYPQPPGN 396

Query: 237 IDQSRETGLPSPSWTDSARDPPSSS 163
             Q   +  P+PSWT S   P SSS
Sbjct: 397 QGQGSSSDFPAPSWTGSGHYPSSSS 421


>emb|CBI18230.3| unnamed protein product [Vitis vinifera]
          Length = 440

 Score = 85.5 bits (210), Expect = 1e-14
 Identities = 55/119 (46%), Positives = 60/119 (50%), Gaps = 1/119 (0%)
 Frame = -1

Query: 711 WLGXXXXXXXXXXXXXXXXXXFRGSRAKLNFPENVRLLPPLPVSPATHFITSDSPATLLP 532
           WLG                  FRG+RAKLNFPENVRL+PPL VSPAT    S  PAT LP
Sbjct: 279 WLGTFDTAEAAARAYDEAALRFRGNRAKLNFPENVRLMPPLQVSPATQLSISGPPATQLP 338

Query: 531 VSQAAQPFXXXXXXXXXXXXXXXXXXDITRDYIQYXXXXXXXSDFQ-RQPTSLLEQMFY 358
           VS +  PF                  DI RDY +Y        DF  +QPTSLLEQMFY
Sbjct: 339 VSSSPPPF---------FQGQALQNPDIVRDYWEYSQLLQSSGDFHGQQPTSLLEQMFY 388


>gb|ADZ28106.1| ethylene response factor 3 [Malus x domestica]
          Length = 472

 Score = 65.1 bits (157), Expect = 1e-08
 Identities = 58/201 (28%), Positives = 76/201 (37%), Gaps = 21/201 (10%)
 Frame = -1

Query: 711 WLGXXXXXXXXXXXXXXXXXXFRGSRAKLNFPENVRLLPPLPVSPATHFITSDSPATLL- 535
           WLG                  FRG+RAKLNFPENVRL+ P P  P      S+S  T   
Sbjct: 255 WLGTFDTAEAAARAYDEAALRFRGNRAKLNFPENVRLVQPPPPPPTLQTFNSNSRPTQYA 314

Query: 534 -PVSQAAQPFXXXXXXXXXXXXXXXXXXDITRDYIQYXXXXXXXSDF------QRQPTSL 376
            P+     P                   D+ RDY  Y       +DF      Q+QP+SL
Sbjct: 315 QPLQPPPLPQPPQQQLYHSQQLFIQPSSDLLRDYFDYSQLLQSSADFHPQQQRQQQPSSL 374

Query: 375 LEQMFYXXXXXXXXXXXXXXXXXXXXS------------FPLLYSDQ-QFMTYFPAPENI 235
           L++M+Y                    S            FPL +S+Q Q M +F  P N 
Sbjct: 375 LQKMYYNSQLASLQSSFLQPASASTPSSALPSSASSSASFPLFFSEQNQQMGFFRQPXNP 434

Query: 234 DQSRETGLPSPSWTDSARDPP 172
           +Q   +   +PSW+ S    P
Sbjct: 435 NQGGPSDFQAPSWSHSGTIHP 455


>ref|XP_002524310.1| conserved hypothetical protein [Ricinus communis]
           gi|223536401|gb|EEF38050.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 448

 Score = 58.9 bits (141), Expect = 1e-06
 Identities = 56/209 (26%), Positives = 76/209 (36%), Gaps = 26/209 (12%)
 Frame = -1

Query: 711 WLGXXXXXXXXXXXXXXXXXXFRGSRAKLNFPENVRLLPPLPVSPATHFITSDSPATLLP 532
           WLG                  FRG+RAKLNFPENVR+LPP         I +  P + +P
Sbjct: 248 WLGTFDTAEAAARAYDEAALRFRGNRAKLNFPENVRILPPP--------IQTTIPVSQIP 299

Query: 531 VSQAAQPFXXXXXXXXXXXXXXXXXXDITRDYIQYXXXXXXXSDFQ--RQPTSLLEQMFY 358
           +S+   P                   +  RDY +Y        DF   +QP+SLLEQMFY
Sbjct: 300 MSRPPPPQPPSQQQQQQQSLFHLQTDNPLRDYWEYSQLLQSSGDFHGVQQPSSLLEQMFY 359

Query: 357 ------------------------XXXXXXXXXXXXXXXXXXXXSFPLLYSDQQFMTYFP 250
                                                       SFPLL + QQ   +  
Sbjct: 360 NQQLASLQSNLSLPSSALSFGASSSGLSTLSSSSSSSLSAGSSASFPLLLAGQQLGYFRT 419

Query: 249 APENIDQSRETGLPSPSWTDSARDPPSSS 163
            P+N +Q   + +  P  +DS   P S++
Sbjct: 420 PPQNQNQPSGSDISVPPRSDSTHYPSSTN 448


>ref|XP_002278226.1| PREDICTED: ethylene-responsive transcription factor ABR1 [Vitis
           vinifera] gi|296082543|emb|CBI21548.3| unnamed protein
           product [Vitis vinifera]
          Length = 352

 Score = 58.2 bits (139), Expect = 2e-06
 Identities = 52/179 (29%), Positives = 67/179 (37%), Gaps = 2/179 (1%)
 Frame = -1

Query: 711 WLGXXXXXXXXXXXXXXXXXXFRGSRAKLNFPENVRLLPPLPVSPATHFITSDSPATLLP 532
           WLG                  FRG++AKLNFPENV+L P    S AT    SDSP TL  
Sbjct: 181 WLGTFDSAEAAARAYDEAALRFRGNKAKLNFPENVQLRPSPSGSQATQLAISDSPETLFS 240

Query: 531 VSQAAQPFXXXXXXXXXXXXXXXXXXDITRDYIQYXXXXXXXSD-FQRQPTSLLEQMFYX 355
           V     P                   ++  DY  Y       SD F RQP +LL+QM   
Sbjct: 241 VPSYTNPI------VQSQPLHRSRSSELPGDYFNYSQMGSSSSDYFPRQPMNLLDQM-RL 293

Query: 354 XXXXXXXXXXXXXXXXXXXSFPLLYSDQQFMTYF-PAPENIDQSRETGLPSPSWTDSAR 181
                                    S   F  +F P P +  QS    +P+P W+D+++
Sbjct: 294 ASPLQSSSSLSSSSPLGSSVSSASSSPPPFSPFFPPQPPSAGQSGGADIPAPPWSDTSQ 352


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