BLASTX nr result
ID: Coptis25_contig00017092
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis25_contig00017092
(1506 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CAN83583.1| hypothetical protein VITISV_009664 [Vitis vinifera] 364 3e-98
ref|XP_002264975.2| PREDICTED: uncharacterized protein LOC100248... 342 2e-91
ref|XP_003633481.1| PREDICTED: uncharacterized protein LOC100254... 336 8e-90
ref|XP_002534081.1| DNA repair protein RAD50, putative [Ricinus ... 328 2e-87
emb|CBI30188.3| unnamed protein product [Vitis vinifera] 315 3e-83
>emb|CAN83583.1| hypothetical protein VITISV_009664 [Vitis vinifera]
Length = 2427
Score = 364 bits (935), Expect = 3e-98
Identities = 229/508 (45%), Positives = 301/508 (59%), Gaps = 6/508 (1%)
Frame = +1
Query: 1 SINLTTYIXXXXXXXXXXXXXXNTQGTILQVKIQCLNPKTIVRDEQLQEAASPLEDMNAD 180
+IN+ +Y+ GTILQVKI CL P+ RDE+ ++ S ED D
Sbjct: 105 TINMASYMSSSASVSVSLPLKKCNHGTILQVKIHCLTPRIKQRDEESKDTNSHEEDPKVD 164
Query: 181 YDETDNKSDISDNSYAKXXXXXXXXXXXXXXXPGEVGSRNASFSASGSRISFDSAEGSVD 360
+TD K D SDN+ AK PGE+GSR SFS SGS SFDSA G V
Sbjct: 165 NHDTDIKLDGSDNA-AKNGGSSSSKDLEPTSHPGELGSRETSFSTSGSNHSFDSAGGFVV 223
Query: 361 KTTFSPRHDFSGDLYDPIGIQDSPSLQNGGTHGAVPVGDHSRSNQTSFNSRFTTSGSNLH 540
+ +FS ++ +GD P G DS S Q +H D +S + FNSR SG+
Sbjct: 224 RGSFSSANNMNGDGNKPTGRDDSTSSQTSASHDKYTFEDPPQSIHSLFNSRVMGSGNLSQ 283
Query: 541 SQRQELGHSPST-LAMSSLGNARSSKELLEAAEDTIEELRSEAKMWERNARKLMHDLELV 717
+ ++ S S +A SSL N SSK LLEAAEDTIEELR+EAKMWERN++KLM DLE++
Sbjct: 284 NPPPDIALSASNVIASSSLTNGGSSKNLLEAAEDTIEELRAEAKMWERNSQKLMLDLEIL 343
Query: 718 RKESSGQSRHQADLDMELSAACTERDSXXXXXXXXXXXXXXXXXXNMASEHSISQAEGIS 897
RKE S QS++QA LDMELSAA +ERD+ E S Q EG +
Sbjct: 344 RKEFSDQSKNQATLDMELSAAYSERDALKKEIDQLKILLEESKMKQAMGE-STFQDEGAT 402
Query: 898 HIQKELESEIKFQKESNTNLAVQLEKTQESNIELVSILQELEETIEKQRLEIDAISAERV 1077
HIQKELE EIKFQKESN NLA+QL ++QESNIELVS+LQELE TIEKQ++E++ ++A R+
Sbjct: 403 HIQKELEDEIKFQKESNANLALQLRRSQESNIELVSVLQELELTIEKQKIELEDLAALRL 462
Query: 1078 NLSTEENCEHGNEDMECPNENQDI----QKLVEAQKEFQATVCXXXXXXXXXXXXXXXXQ 1245
L+ ++ H E EN+D+ Q+L +++K Q V +
Sbjct: 463 KLNDADSSIH-----ESLAENKDVALQLQQLQDSEKNLQVKVGFLEQALEDKNHELENER 517
Query: 1246 N-SRRTLLELEADYKYKLSAREVEMMKLEAKLSDLLNTQGSNDNRCSRGIDSDLIKEIET 1422
+ S + +L++E YK KLSA+E E++ LEA+LS+ + S + G D LIKEIE
Sbjct: 518 SLSNQAILDVETGYKSKLSAKEEEIVDLEARLSESIKGTNSEQMVANNGGDESLIKEIEA 577
Query: 1423 LKEKVQELENDCNELTEENLELIFKLQE 1506
LK K++ELE DCNELT+ENLEL+FKL+E
Sbjct: 578 LKVKLEELERDCNELTDENLELLFKLKE 605
>ref|XP_002264975.2| PREDICTED: uncharacterized protein LOC100248757 [Vitis vinifera]
Length = 2411
Score = 342 bits (877), Expect = 2e-91
Identities = 221/503 (43%), Positives = 282/503 (56%), Gaps = 1/503 (0%)
Frame = +1
Query: 1 SINLTTYIXXXXXXXXXXXXXXNTQGTILQVKIQCLNPKTIVRDEQLQEAASPLEDMNAD 180
+IN+ +Y+ GTILQVKI CL P+ RDE+ ++ S ED D
Sbjct: 105 TINMASYMSSSASVSVSLPLKKCNHGTILQVKIHCLTPRIKQRDEESKDTNSHEEDPKVD 164
Query: 181 YDETDNKSDISDNSYAKXXXXXXXXXXXXXXXPGEVGSRNASFSASGSRISFDSAEGSVD 360
+TD K D SDN+ AK PGE+GSR SFS SGS SFDSA G V
Sbjct: 165 NHDTDIKLDGSDNA-AKNGGSSSSKDLEPTSHPGELGSRETSFSTSGSNHSFDSAGGFVV 223
Query: 361 KTTFSPRHDFSGDLYDPIGIQDSPSLQNGGTHGAVPVGDHSRSNQTSFNSRFTTSGSNLH 540
+ +FS ++ +GD P G DS S Q +H D +S + FNSR SG+
Sbjct: 224 RGSFSSANNMNGDGNKPTGRDDSTSSQTSASHDKYTFEDPPQSIHSLFNSRVMGSGNLSQ 283
Query: 541 SQRQELGHSPST-LAMSSLGNARSSKELLEAAEDTIEELRSEAKMWERNARKLMHDLELV 717
+ ++ S S +A SSL N SSK LLEAAEDTIEELR+EAKMWERN++KLM DLE++
Sbjct: 284 NPPPDIALSASNVIASSSLTNGGSSKNLLEAAEDTIEELRAEAKMWERNSQKLMLDLEIL 343
Query: 718 RKESSGQSRHQADLDMELSAACTERDSXXXXXXXXXXXXXXXXXXNMASEHSISQAEGIS 897
RKE S QS++QA LDMELSAA +ERD+ E S Q EG +
Sbjct: 344 RKEFSDQSKNQATLDMELSAAYSERDALKKEIDQLKILLEESKMKQAMGE-STFQDEGAT 402
Query: 898 HIQKELESEIKFQKESNTNLAVQLEKTQESNIELVSILQELEETIEKQRLEIDAISAERV 1077
HIQKELE EIKFQKESN NLA+QL ++QESNIELVS+LQELE TIEKQ++E++ ++A R+
Sbjct: 403 HIQKELEDEIKFQKESNANLALQLRRSQESNIELVSVLQELELTIEKQKIELEDLAALRL 462
Query: 1078 NLSTEENCEHGNEDMECPNENQDIQKLVEAQKEFQATVCXXXXXXXXXXXXXXXXQNSRR 1257
L+ ++ H E EN+D
Sbjct: 463 KLNDADSSIH-----ESLAENKD------------------------------------- 480
Query: 1258 TLLELEADYKYKLSAREVEMMKLEAKLSDLLNTQGSNDNRCSRGIDSDLIKEIETLKEKV 1437
YK KLSA+E E++ LEA+LS+ + S + G D LIKEIE LK K+
Sbjct: 481 ------TGYKSKLSAKEEEIVDLEARLSESIKGTNSEQMVANNGGDESLIKEIEALKVKL 534
Query: 1438 QELENDCNELTEENLELIFKLQE 1506
+ELE DCNELT+ENLEL+FKL+E
Sbjct: 535 EELERDCNELTDENLELLFKLKE 557
>ref|XP_003633481.1| PREDICTED: uncharacterized protein LOC100254715 [Vitis vinifera]
Length = 1395
Score = 336 bits (862), Expect = 8e-90
Identities = 198/458 (43%), Positives = 277/458 (60%)
Frame = +1
Query: 133 EQLQEAASPLEDMNADYDETDNKSDISDNSYAKXXXXXXXXXXXXXXXPGEVGSRNASFS 312
+Q Q S +ED +A+YD+ +N SD+SD+++ + PGE G ++ S S
Sbjct: 149 QQWQNTNSHVEDSSAEYDDLENISDVSDSTFTRSIGSSSSNQFDSTYHPGETGGKDTSRS 208
Query: 313 ASGSRISFDSAEGSVDKTTFSPRHDFSGDLYDPIGIQDSPSLQNGGTHGAVPVGDHSRSN 492
ASGS SFDS EGS+ + SP++ F+G + D IG QDS S + G+ P D SRSN
Sbjct: 209 ASGSHRSFDSMEGSLGRENLSPQNPFTGVMNDLIGKQDSTSSNSSSLFGSYPANDISRSN 268
Query: 493 QTSFNSRFTTSGSNLHSQRQELGHSPSTLAMSSLGNARSSKELLEAAEDTIEELRSEAKM 672
++SFNS+ ++SGS+L +QR + G +A S L NA S K+L EAAE EELR+EA+M
Sbjct: 269 RSSFNSKVSSSGSHLQNQRDDFGRVSHAIATSPLRNAGSCKDL-EAAEGAFEELRAEARM 327
Query: 673 WERNARKLMHDLELVRKESSGQSRHQADLDMELSAACTERDSXXXXXXXXXXXXXXXXXX 852
WE+NARKLMHDLE++RKE S QS++QADLDMEL+A+ TE +
Sbjct: 328 WEQNARKLMHDLEILRKEFSNQSKNQADLDMELAASHTECNRLRQEIEQLNFLLEELTVR 387
Query: 853 NMASEHSISQAEGISHIQKELESEIKFQKESNTNLAVQLEKTQESNIELVSILQELEETI 1032
+E+ QA+ +++IQ+ELE EIKFQKESN NL +QL+KTQESNIELVS+LQE+EE I
Sbjct: 388 QKDTENLKLQAQNMNNIQQELEDEIKFQKESNANLTIQLKKTQESNIELVSVLQEMEEMI 447
Query: 1033 EKQRLEIDAISAERVNLSTEENCEHGNEDMECPNENQDIQKLVEAQKEFQATVCXXXXXX 1212
EKQ++EI +LS E+N E +E +++ +A
Sbjct: 448 EKQKMEI-------TDLSKEKNHE------------------IEIERDLKA--------- 473
Query: 1213 XXXXXXXXXXQNSRRTLLELEADYKYKLSAREVEMMKLEAKLSDLLNTQGSNDNRCSRGI 1392
+ LL+ + ++K KL+A+EV+++ LE KLS+ ++ + G
Sbjct: 474 --------------QALLDCQEEWKCKLAAKEVDIISLETKLSEAIHALNVKETGPQNGG 519
Query: 1393 DSDLIKEIETLKEKVQELENDCNELTEENLELIFKLQE 1506
D +LIKEIE LK KVQELE DC ELT+ENL L FK++E
Sbjct: 520 DHNLIKEIEALKVKVQELERDCVELTDENLSLHFKIKE 557
>ref|XP_002534081.1| DNA repair protein RAD50, putative [Ricinus communis]
gi|223525882|gb|EEF28304.1| DNA repair protein RAD50,
putative [Ricinus communis]
Length = 1362
Score = 328 bits (841), Expect = 2e-87
Identities = 205/502 (40%), Positives = 285/502 (56%)
Frame = +1
Query: 1 SINLTTYIXXXXXXXXXXXXXXNTQGTILQVKIQCLNPKTIVRDEQLQEAASPLEDMNAD 180
++NL +Y GTILQV Q + S +ED+N D
Sbjct: 80 TVNLASYKNSKTAVPVSLSLKKCNHGTILQVSHQ---------------SNSHMEDVNVD 124
Query: 181 YDETDNKSDISDNSYAKXXXXXXXXXXXXXXXPGEVGSRNASFSASGSRISFDSAEGSVD 360
D+ ++KSD+SDNS K GE+ +R+ SFSASGSR SFDS +GS+
Sbjct: 125 CDDVESKSDVSDNSLTKSIGSSSSSHLDSSSHAGELLNRDFSFSASGSRYSFDSTDGSLG 184
Query: 361 KTTFSPRHDFSGDLYDPIGIQDSPSLQNGGTHGAVPVGDHSRSNQTSFNSRFTTSGSNLH 540
+ T+SP ++ +G + + IG QDS QN +HG+ D SRSNQ+SFNS+ S S+L
Sbjct: 185 RETYSPLNNLTGIMNNQIGRQDSTGSQNS-SHGSYSFNDSSRSNQSSFNSKVLASRSSLQ 243
Query: 541 SQRQELGHSPSTLAMSSLGNARSSKELLEAAEDTIEELRSEAKMWERNARKLMHDLELVR 720
QR E ++A S L NA SSK+LLEAAE IEELR+EA+MWE+NARKLM+DLE +R
Sbjct: 244 IQRDEFNQVSRSVASSPLRNAGSSKDLLEAAEAKIEELRAEARMWEQNARKLMNDLEKLR 303
Query: 721 KESSGQSRHQADLDMELSAACTERDSXXXXXXXXXXXXXXXXXXNMASEHSISQAEGISH 900
KE S QS+ QA L+MELS + E D ++E+ QA+ + +
Sbjct: 304 KELSDQSKCQASLEMELSESRRECDGLKQEIEQVKILLEESLVKQKSAENMELQAKDMGN 363
Query: 901 IQKELESEIKFQKESNTNLAVQLEKTQESNIELVSILQELEETIEKQRLEIDAISAERVN 1080
+QKELE E++F+KESN NLA+QL+KTQESNIELVSILQELE+TIEK ++EI +S E+V
Sbjct: 364 LQKELEDEVRFEKESNANLALQLKKTQESNIELVSILQELEDTIEKLKMEIANLSKEKV- 422
Query: 1081 LSTEENCEHGNEDMECPNENQDIQKLVEAQKEFQATVCXXXXXXXXXXXXXXXXQNSRRT 1260
+ + ++++ Q T
Sbjct: 423 ------------------QELEAAEVLKTQ-----------------------------T 435
Query: 1261 LLELEADYKYKLSAREVEMMKLEAKLSDLLNTQGSNDNRCSRGIDSDLIKEIETLKEKVQ 1440
L+E EA ++ KL+ +E E++ L++KLS+ L + G D +LIKE+E LK+K++
Sbjct: 436 LMECEAQWRDKLAVKEEEIINLKSKLSEALKV-----DNFENGADKNLIKEVEVLKQKIE 490
Query: 1441 ELENDCNELTEENLELIFKLQE 1506
ELE DCNELT+ENLEL+ KL+E
Sbjct: 491 ELEKDCNELTDENLELLLKLKE 512
>emb|CBI30188.3| unnamed protein product [Vitis vinifera]
Length = 1369
Score = 315 bits (806), Expect = 3e-83
Identities = 212/503 (42%), Positives = 272/503 (54%), Gaps = 1/503 (0%)
Frame = +1
Query: 1 SINLTTYIXXXXXXXXXXXXXXNTQGTILQVKIQCLNPKTIVRDEQLQEAASPLEDMNAD 180
+IN+ +Y+ GTILQ + ++ S ED D
Sbjct: 105 TINMASYMSSSASVSVSLPLKKCNHGTILQ---------------ESKDTNSHEEDPKVD 149
Query: 181 YDETDNKSDISDNSYAKXXXXXXXXXXXXXXXPGEVGSRNASFSASGSRISFDSAEGSVD 360
+TD K D SDN+ AK PGE+GSR SFS SGS SFDSA G V
Sbjct: 150 NHDTDIKLDGSDNA-AKNGGSSSSKDLEPTSHPGELGSRETSFSTSGSNHSFDSAGGFVV 208
Query: 361 KTTFSPRHDFSGDLYDPIGIQDSPSLQNGGTHGAVPVGDHSRSNQTSFNSRFTTSGSNLH 540
+ +FS ++ +GD P G DS S Q +H D +S + FNSR SG+
Sbjct: 209 RGSFSSANNMNGDGNKPTGRDDSTSSQTSASHDKYTFEDPPQSIHSLFNSRVMGSGNLSQ 268
Query: 541 SQRQELGHSPST-LAMSSLGNARSSKELLEAAEDTIEELRSEAKMWERNARKLMHDLELV 717
+ ++ S S +A SSL N SSK LLEAAEDTIEELR+EAKMWERN++KLM DLE++
Sbjct: 269 NPPPDIALSASNVIASSSLTNGGSSKNLLEAAEDTIEELRAEAKMWERNSQKLMLDLEIL 328
Query: 718 RKESSGQSRHQADLDMELSAACTERDSXXXXXXXXXXXXXXXXXXNMASEHSISQAEGIS 897
RKE S QS++QA LDMELSAA +ERD+ E S Q EG +
Sbjct: 329 RKEFSDQSKNQATLDMELSAAYSERDALKKEIDQLKILLEESKMKQAMGE-STFQDEGAT 387
Query: 898 HIQKELESEIKFQKESNTNLAVQLEKTQESNIELVSILQELEETIEKQRLEIDAISAERV 1077
HIQKELE EIKFQKESN NLA+QL ++QESNIELVS+LQELE TIEKQ++E++ ++A R+
Sbjct: 388 HIQKELEDEIKFQKESNANLALQLRRSQESNIELVSVLQELELTIEKQKIELEDLAALRL 447
Query: 1078 NLSTEENCEHGNEDMECPNENQDIQKLVEAQKEFQATVCXXXXXXXXXXXXXXXXQNSRR 1257
L+ ++ H E EN+D
Sbjct: 448 KLNDADSSIH-----ESLAENKD------------------------------------- 465
Query: 1258 TLLELEADYKYKLSAREVEMMKLEAKLSDLLNTQGSNDNRCSRGIDSDLIKEIETLKEKV 1437
YK KLSA+E E++ LEA+LS+ + S + G D LIKEIE LK K+
Sbjct: 466 ------TGYKSKLSAKEEEIVDLEARLSESIKGTNSEQMVANNGGDESLIKEIEALKVKL 519
Query: 1438 QELENDCNELTEENLELIFKLQE 1506
+ELE DCNELT+ENLEL+FKL+E
Sbjct: 520 EELERDCNELTDENLELLFKLKE 542