BLASTX nr result

ID: Coptis25_contig00017075 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00017075
         (1531 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003554233.1| PREDICTED: sugar transporter ERD6-like 7-lik...    60   5e-12
ref|XP_003554234.1| PREDICTED: sugar transporter ERD6-like 7-lik...    60   5e-12
ref|NP_001233882.1| st3 protein [Solanum lycopersicum] gi|235043...    57   5e-11
ref|XP_003521224.1| PREDICTED: sugar transporter ERD6-like 7-lik...    57   5e-11
ref|XP_003520551.1| PREDICTED: LOW QUALITY PROTEIN: sugar transp...    60   7e-11

>ref|XP_003554233.1| PREDICTED: sugar transporter ERD6-like 7-like isoform 1 [Glycine
           max]
          Length = 466

 Score = 60.1 bits (144), Expect(2) = 5e-12
 Identities = 33/68 (48%), Positives = 41/68 (60%), Gaps = 17/68 (25%)
 Frame = +2

Query: 428 GVGILMVCQQFGGINGVCFYTSGIFATA-----------------VTAIGASLVDKVGR* 556
           G+G LMVCQQFGGING+CFYTS IF  A                 +T +GA+L+DK GR 
Sbjct: 270 GIG-LMVCQQFGGINGICFYTSSIFELAGFSPTIGTITYACLQIVITGLGAALIDKAGRK 328

Query: 557 SLHVVCGS 580
            L ++ GS
Sbjct: 329 PLLLLSGS 336



 Score = 38.5 bits (88), Expect(2) = 5e-12
 Identities = 16/21 (76%), Positives = 20/21 (95%)
 Frame = +3

Query: 618 LLYMGSFSIGMGAVHWVVMSK 680
           L+Y+GSFSIGMGA+ WVVMS+
Sbjct: 370 LVYIGSFSIGMGAIPWVVMSE 390


>ref|XP_003554234.1| PREDICTED: sugar transporter ERD6-like 7-like isoform 2 [Glycine
           max]
          Length = 437

 Score = 60.1 bits (144), Expect(2) = 5e-12
 Identities = 33/68 (48%), Positives = 41/68 (60%), Gaps = 17/68 (25%)
 Frame = +2

Query: 428 GVGILMVCQQFGGINGVCFYTSGIFATA-----------------VTAIGASLVDKVGR* 556
           G+G LMVCQQFGGING+CFYTS IF  A                 +T +GA+L+DK GR 
Sbjct: 241 GIG-LMVCQQFGGINGICFYTSSIFELAGFSPTIGTITYACLQIVITGLGAALIDKAGRK 299

Query: 557 SLHVVCGS 580
            L ++ GS
Sbjct: 300 PLLLLSGS 307



 Score = 38.5 bits (88), Expect(2) = 5e-12
 Identities = 16/21 (76%), Positives = 20/21 (95%)
 Frame = +3

Query: 618 LLYMGSFSIGMGAVHWVVMSK 680
           L+Y+GSFSIGMGA+ WVVMS+
Sbjct: 341 LVYIGSFSIGMGAIPWVVMSE 361


>ref|NP_001233882.1| st3 protein [Solanum lycopersicum] gi|23504385|emb|CAC00697.2|
           putative sugar transporter [Solanum lycopersicum]
          Length = 480

 Score = 56.6 bits (135), Expect(2) = 5e-11
 Identities = 32/73 (43%), Positives = 44/73 (60%), Gaps = 17/73 (23%)
 Frame = +2

Query: 413 SNTLFGVGILMVCQQFGGINGVCFYTSGIFATA-----------------VTAIGASLVD 541
           S+ + GVG LMV QQFGGING+CFYT  IF ++                 +TA+GA+L+D
Sbjct: 278 SSLIVGVG-LMVFQQFGGINGICFYTGSIFESSGFSSDIGTIIYAIIQVPITALGAALID 336

Query: 542 KVGR*SLHVVCGS 580
           + GR  L +V G+
Sbjct: 337 RTGRKPLLLVSGT 349



 Score = 38.5 bits (88), Expect(2) = 5e-11
 Identities = 16/21 (76%), Positives = 20/21 (95%)
 Frame = +3

Query: 618 LLYMGSFSIGMGAVHWVVMSK 680
           L+Y+GSFS+GMGAV WVVMS+
Sbjct: 383 LVYIGSFSVGMGAVPWVVMSE 403


>ref|XP_003521224.1| PREDICTED: sugar transporter ERD6-like 7-like [Glycine max]
          Length = 471

 Score = 56.6 bits (135), Expect(2) = 5e-11
 Identities = 31/68 (45%), Positives = 39/68 (57%), Gaps = 17/68 (25%)
 Frame = +2

Query: 428 GVGILMVCQQFGGINGVCFYTSGIFATA-----------------VTAIGASLVDKVGR* 556
           G+G LMVCQQFGGING+CFY S IF  A                 +T +GA+ +DK GR 
Sbjct: 275 GIG-LMVCQQFGGINGICFYASSIFEQAGFSPTIGTITYACLQIVITGLGAAFIDKAGRK 333

Query: 557 SLHVVCGS 580
            L ++ GS
Sbjct: 334 PLLLLSGS 341



 Score = 38.5 bits (88), Expect(2) = 5e-11
 Identities = 16/21 (76%), Positives = 20/21 (95%)
 Frame = +3

Query: 618 LLYMGSFSIGMGAVHWVVMSK 680
           L+Y+GSFSIGMGA+ WVVMS+
Sbjct: 375 LVYIGSFSIGMGAIPWVVMSE 395


>ref|XP_003520551.1| PREDICTED: LOW QUALITY PROTEIN: sugar transporter ERD6-like 7-like
           [Glycine max]
          Length = 421

 Score = 59.7 bits (143), Expect(2) = 7e-11
 Identities = 33/68 (48%), Positives = 40/68 (58%), Gaps = 17/68 (25%)
 Frame = +2

Query: 428 GVGILMVCQQFGGINGVCFYTSGIFATA-----------------VTAIGASLVDKVGR* 556
           G+G LMVCQQFGGING+CFYTS IF  A                  T +GA+L+DK GR 
Sbjct: 226 GIG-LMVCQQFGGINGICFYTSSIFELAGFSPTIGTITYACLQIVTTGLGAALIDKAGRK 284

Query: 557 SLHVVCGS 580
            L ++ GS
Sbjct: 285 PLLLISGS 292



 Score = 35.0 bits (79), Expect(2) = 7e-11
 Identities = 14/19 (73%), Positives = 18/19 (94%)
 Frame = +3

Query: 618 LLYMGSFSIGMGAVHWVVM 674
           L+Y+GSFSIG+GA+ WVVM
Sbjct: 326 LVYIGSFSIGIGAIPWVVM 344


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