BLASTX nr result

ID: Coptis25_contig00017069 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00017069
         (1302 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002314512.1| predicted protein [Populus trichocarpa] gi|2...   124   5e-26
emb|CBI23733.3| unnamed protein product [Vitis vinifera]              124   7e-26
ref|XP_002282340.1| PREDICTED: glutamyl-tRNA(Gln) amidotransfera...   124   7e-26
ref|XP_002311699.1| predicted protein [Populus trichocarpa] gi|2...   123   1e-25
ref|XP_004147167.1| PREDICTED: glutamyl-tRNA(Gln) amidotransfera...   120   6e-25

>ref|XP_002314512.1| predicted protein [Populus trichocarpa] gi|222863552|gb|EEF00683.1|
           predicted protein [Populus trichocarpa]
          Length = 528

 Score =  124 bits (311), Expect = 5e-26
 Identities = 63/86 (73%), Positives = 72/86 (83%)
 Frame = -1

Query: 396 KNVTMRKKEGLADYRCFSEPDLPEIDLTR*YIDSIKASLPELLELKRSR*ESMGLSMQDV 217
           K +TMRKKEGL+DYR F EPDLPE+ + + YIDSI+ SLPEL E+KR R ESMGLSMQDV
Sbjct: 261 KTITMRKKEGLSDYRYFPEPDLPEVIVKKEYIDSIQNSLPELPEMKRRRYESMGLSMQDV 320

Query: 216 HFLVNDINV*RFFDATVAKGADVKMA 139
            FL NDINV  FFDAT+AKGADVK+A
Sbjct: 321 LFLANDINVAEFFDATIAKGADVKLA 346


>emb|CBI23733.3| unnamed protein product [Vitis vinifera]
          Length = 315

 Score =  124 bits (310), Expect = 7e-26
 Identities = 63/87 (72%), Positives = 71/87 (81%)
 Frame = -1

Query: 396 KNVTMRKKEGLADYRCFSEPDLPEIDLTR*YIDSIKASLPELLELKRSR*ESMGLSMQDV 217
           K VTMRKKEGL+DYR F EPDLPE+ LT  Y+ SI++SLPEL ELKR R E MGLSMQDV
Sbjct: 137 KTVTMRKKEGLSDYRYFPEPDLPEVILTEDYVGSIRSSLPELPELKRRRYEKMGLSMQDV 196

Query: 216 HFLVNDINV*RFFDATVAKGADVKMAA 136
            FL ND+NV  FFDAT+ KGADVK+AA
Sbjct: 197 LFLANDVNVAGFFDATIGKGADVKLAA 223


>ref|XP_002282340.1| PREDICTED: glutamyl-tRNA(Gln) amidotransferase subunit B,
           chloroplastic/mitochondrial-like [Vitis vinifera]
          Length = 556

 Score =  124 bits (310), Expect = 7e-26
 Identities = 63/87 (72%), Positives = 71/87 (81%)
 Frame = -1

Query: 396 KNVTMRKKEGLADYRCFSEPDLPEIDLTR*YIDSIKASLPELLELKRSR*ESMGLSMQDV 217
           K VTMRKKEGL+DYR F EPDLPE+ LT  Y+ SI++SLPEL ELKR R E MGLSMQDV
Sbjct: 335 KTVTMRKKEGLSDYRYFPEPDLPEVILTEDYVGSIRSSLPELPELKRRRYEKMGLSMQDV 394

Query: 216 HFLVNDINV*RFFDATVAKGADVKMAA 136
            FL ND+NV  FFDAT+ KGADVK+AA
Sbjct: 395 LFLANDVNVAGFFDATIGKGADVKLAA 421


>ref|XP_002311699.1| predicted protein [Populus trichocarpa] gi|222851519|gb|EEE89066.1|
           predicted protein [Populus trichocarpa]
          Length = 506

 Score =  123 bits (308), Expect = 1e-25
 Identities = 62/86 (72%), Positives = 73/86 (84%)
 Frame = -1

Query: 396 KNVTMRKKEGLADYRCFSEPDLPEIDLTR*YIDSIKASLPELLELKRSR*ESMGLSMQDV 217
           K VTMRKKEGL+DYR F EPDLPE+ L + Y++SI+ SLPEL E+KR R E+MGLSMQDV
Sbjct: 308 KTVTMRKKEGLSDYRYFPEPDLPEVILKKEYVNSIQNSLPELPEMKRRRYENMGLSMQDV 367

Query: 216 HFLVNDINV*RFFDATVAKGADVKMA 139
            FL NDINV +FFDAT+AKGADVK+A
Sbjct: 368 LFLANDINVAKFFDATIAKGADVKLA 393


>ref|XP_004147167.1| PREDICTED: glutamyl-tRNA(Gln) amidotransferase subunit B,
           chloroplastic/mitochondrial-like [Cucumis sativus]
          Length = 555

 Score =  120 bits (302), Expect = 6e-25
 Identities = 60/87 (68%), Positives = 73/87 (83%)
 Frame = -1

Query: 396 KNVTMRKKEGLADYRCFSEPDLPEIDLTR*YIDSIKASLPELLELKRSR*ESMGLSMQDV 217
           K +TMRKKEGL+DYR F EPDLPE+ LT+ Y+++I  SLPEL E+KR R ESMGLSMQDV
Sbjct: 334 KTITMRKKEGLSDYRYFPEPDLPEVILTKEYVENIHDSLPELPEMKRRRYESMGLSMQDV 393

Query: 216 HFLVNDINV*RFFDATVAKGADVKMAA 136
            FL NDI+V  FFDAT+A+GA+VK+AA
Sbjct: 394 LFLANDISVAEFFDATIARGAEVKLAA 420


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