BLASTX nr result

ID: Coptis25_contig00017067 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00017067
         (513 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI15390.3| unnamed protein product [Vitis vinifera]              221   5e-56
ref|XP_002271556.1| PREDICTED: G patch domain-containing protein...   221   5e-56
ref|XP_002511999.1| RNA binding protein, putative [Ricinus commu...   196   1e-48
ref|XP_002318558.1| predicted protein [Populus trichocarpa] gi|2...   193   1e-47
ref|XP_004138338.1| PREDICTED: G patch domain-containing protein...   187   8e-46

>emb|CBI15390.3| unnamed protein product [Vitis vinifera]
          Length = 944

 Score =  221 bits (563), Expect = 5e-56
 Identities = 113/170 (66%), Positives = 136/170 (80%)
 Frame = +2

Query: 2   ESIPSLQKMTAESRGRILGEKPLERSYKDSSPSIASADAVQFQFNLSDTFTKPASLNDTP 181
           +S P++QKMTAESRG+ILGE+PLERS +D++ S+ASAD +Q QFNLSDTFTKPASL +  
Sbjct: 470 KSSPTVQKMTAESRGKILGERPLERSSRDTNSSVASADVIQLQFNLSDTFTKPASLKELS 529

Query: 182 ECVKPFKADPAKQERFEQFLKEKYQGGFRSTESGGNSKMSESARARERLDFEAAAEAIEK 361
           E  KPFK DPAKQERFE FLKEKY GG RST+SGG S MSE+ARARE+LDFEAAAE IEK
Sbjct: 530 EIAKPFKEDPAKQERFELFLKEKYHGGLRSTDSGGASNMSEAARAREKLDFEAAAETIEK 589

Query: 362 GKQDASNVLFPNQQLAEMSASASLQFTSGGLEEAKVSKVEEQIRSKMYPK 511
           G +   + L   QQ  EMSA+A ++F  GGLE+AKV++ EE +  KMYPK
Sbjct: 590 GLRGKESNL-STQQFMEMSATAVMEFAPGGLEQAKVTQAEELVIKKMYPK 638


>ref|XP_002271556.1| PREDICTED: G patch domain-containing protein 1-like [Vitis
           vinifera]
          Length = 997

 Score =  221 bits (563), Expect = 5e-56
 Identities = 113/170 (66%), Positives = 136/170 (80%)
 Frame = +2

Query: 2   ESIPSLQKMTAESRGRILGEKPLERSYKDSSPSIASADAVQFQFNLSDTFTKPASLNDTP 181
           +S P++QKMTAESRG+ILGE+PLERS +D++ S+ASAD +Q QFNLSDTFTKPASL +  
Sbjct: 470 KSSPTVQKMTAESRGKILGERPLERSSRDTNSSVASADVIQLQFNLSDTFTKPASLKELS 529

Query: 182 ECVKPFKADPAKQERFEQFLKEKYQGGFRSTESGGNSKMSESARARERLDFEAAAEAIEK 361
           E  KPFK DPAKQERFE FLKEKY GG RST+SGG S MSE+ARARE+LDFEAAAE IEK
Sbjct: 530 EIAKPFKEDPAKQERFELFLKEKYHGGLRSTDSGGASNMSEAARAREKLDFEAAAETIEK 589

Query: 362 GKQDASNVLFPNQQLAEMSASASLQFTSGGLEEAKVSKVEEQIRSKMYPK 511
           G +   + L   QQ  EMSA+A ++F  GGLE+AKV++ EE +  KMYPK
Sbjct: 590 GLRGKESNL-STQQFMEMSATAVMEFAPGGLEQAKVTQAEELVIKKMYPK 638


>ref|XP_002511999.1| RNA binding protein, putative [Ricinus communis]
           gi|223549179|gb|EEF50668.1| RNA binding protein,
           putative [Ricinus communis]
          Length = 1000

 Score =  196 bits (499), Expect = 1e-48
 Identities = 106/170 (62%), Positives = 124/170 (72%)
 Frame = +2

Query: 2   ESIPSLQKMTAESRGRILGEKPLERSYKDSSPSIASADAVQFQFNLSDTFTKPASLNDTP 181
           +S  S+Q+MTAESR  +LGEKPLERS K+++ S+ASAD    QFNLSDTF KPAS ++ P
Sbjct: 474 KSSSSVQRMTAESRANLLGEKPLERSLKENTSSVASAD-FNLQFNLSDTFIKPASYSELP 532

Query: 182 ECVKPFKADPAKQERFEQFLKEKYQGGFRSTESGGNSKMSESARARERLDFEAAAEAIEK 361
           E  KPFK DPAKQERFEQFLKEKY GG RS +S G S MSE+ARARERLDFEAAAEAIEK
Sbjct: 533 EVAKPFKDDPAKQERFEQFLKEKYYGGLRSMDSVGASNMSEAARARERLDFEAAAEAIEK 592

Query: 362 GKQDASNVLFPNQQLAEMSASASLQFTSGGLEEAKVSKVEEQIRSKMYPK 511
           GK +    L   QQ    S     QFTSGGLE+ K +  E+ +  K+YPK
Sbjct: 593 GKGNKETKL-SAQQFMAFSTGGGTQFTSGGLEQVKDAHAEDLLMKKIYPK 641


>ref|XP_002318558.1| predicted protein [Populus trichocarpa] gi|222859231|gb|EEE96778.1|
           predicted protein [Populus trichocarpa]
          Length = 965

 Score =  193 bits (490), Expect = 1e-47
 Identities = 105/166 (63%), Positives = 122/166 (73%)
 Frame = +2

Query: 14  SLQKMTAESRGRILGEKPLERSYKDSSPSIASADAVQFQFNLSDTFTKPASLNDTPECVK 193
           S+ KMT ESRG+ILGE PLERS +D S SIAS + V   FNLSDTFTKP S ++ PE  K
Sbjct: 482 SVDKMTVESRGKILGEMPLERSSRDLSSSIASVN-VNLPFNLSDTFTKPESSSEFPEVAK 540

Query: 194 PFKADPAKQERFEQFLKEKYQGGFRSTESGGNSKMSESARARERLDFEAAAEAIEKGKQD 373
           PF+ DP KQERFEQFLKEKYQGG RST S G S MSE+ARARERLDFEAAAEAIEKGK +
Sbjct: 541 PFQDDPGKQERFEQFLKEKYQGGIRSTASAGASNMSEAARARERLDFEAAAEAIEKGKLN 600

Query: 374 ASNVLFPNQQLAEMSASASLQFTSGGLEEAKVSKVEEQIRSKMYPK 511
             N L  +QQL    AS  +QFT GGL++ K +  E+    K+YP+
Sbjct: 601 KENKL--SQQLMAFPASGGMQFTLGGLQQGKDTPDEDLATKKIYPR 644


>ref|XP_004138338.1| PREDICTED: G patch domain-containing protein 1-like [Cucumis
           sativus]
          Length = 1001

 Score =  187 bits (475), Expect = 8e-46
 Identities = 103/167 (61%), Positives = 118/167 (70%)
 Frame = +2

Query: 11  PSLQKMTAESRGRILGEKPLERSYKDSSPSIASADAVQFQFNLSDTFTKPASLNDTPECV 190
           PSL+KMTAESRG+ILGEKPL RS K+ +P  AS D V  Q+NLSDTFTKP S    PE V
Sbjct: 479 PSLKKMTAESRGKILGEKPLARSAKELNPPAAS-DGVHVQYNLSDTFTKPTSSGGMPEIV 537

Query: 191 KPFKADPAKQERFEQFLKEKYQGGFRSTESGGNSKMSESARARERLDFEAAAEAIEKGKQ 370
           KPFK D AKQERFEQFLKEKYQGG R+    G   MSE+ARARERLDFEAAAEAIEKGK 
Sbjct: 538 KPFKDDSAKQERFEQFLKEKYQGGLRTGAPVGAINMSEAARARERLDFEAAAEAIEKGK- 596

Query: 371 DASNVLFPNQQLAEMSASASLQFTSGGLEEAKVSKVEEQIRSKMYPK 511
                    +   +  A+  +QFTSGG+EE K +K+E  +  KM PK
Sbjct: 597 GLKETKLSAEHFVDFLATGGMQFTSGGVEEVKDTKLEGLMMEKMIPK 643


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