BLASTX nr result

ID: Coptis25_contig00017046 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00017046
         (1286 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002305421.1| predicted protein [Populus trichocarpa] gi|2...   270   6e-70
ref|XP_003631634.1| PREDICTED: nogo-B receptor-like isoform 1 [V...   269   1e-69
ref|XP_002519078.1| conserved hypothetical protein [Ricinus comm...   258   2e-66
ref|XP_004148090.1| PREDICTED: nogo-B receptor-like [Cucumis sat...   243   1e-61
ref|NP_001242452.1| uncharacterized protein LOC100796301 [Glycin...   229   2e-57

>ref|XP_002305421.1| predicted protein [Populus trichocarpa] gi|222848385|gb|EEE85932.1|
           predicted protein [Populus trichocarpa]
          Length = 254

 Score =  270 bits (690), Expect = 6e-70
 Identities = 132/234 (56%), Positives = 176/234 (75%), Gaps = 6/234 (2%)
 Frame = +3

Query: 282 LRLVWLFLHLVATIWHFVMGTAQTLQSYLISSGIVNKYKAIDLTNLQYLAIVVESQEAYD 461
           LRLVW  +HL+   W+  +G A  ++SYLISSG++ +Y++ID+  L+YLAIV+ES +A  
Sbjct: 22  LRLVWHSVHLLVRFWYLGVGVANVIESYLISSGLLKRYRSIDVGKLRYLAIVIESDDACR 81

Query: 462 MARVVKLLHWLSKIGVKHICLYDMDGVLKKTRKFILEKLGESRLWHLEDGEKSSCLDETQ 641
           +++V++LL WL  IGVKH+CLYD +GVLKK+++ IL KL  + L+   D E+ S LD+  
Sbjct: 82  ISKVIQLLQWLQAIGVKHLCLYDTEGVLKKSKESILAKLKNATLFEEAD-ERDSLLDQKH 140

Query: 642 RTLEFLSISDGKEGTAKAASHLCTKYLEVSD------EPTFTEESMGEALRAVGCGGPQP 803
            TLEF SISDGKE  AK  + L  KY +V++      E  FTE +M EALRAVGCGGP+P
Sbjct: 141 MTLEFASISDGKEAVAKGGNVLFMKYSKVANSGAEQKEQIFTEANMTEALRAVGCGGPEP 200

Query: 804 NLLLVYGPVRCHLGFPAWRMRYTEIVHMGPLKSMKHGTLVKTVHKFAKVQQNYG 965
           +LLLVYGP RCHLGFPAWR+RYTEIVHMGPLKS+++G+LVK ++KF  V+Q YG
Sbjct: 201 DLLLVYGPARCHLGFPAWRIRYTEIVHMGPLKSVRYGSLVKAIYKFTIVRQKYG 254


>ref|XP_003631634.1| PREDICTED: nogo-B receptor-like isoform 1 [Vitis vinifera]
           gi|359475284|ref|XP_003631635.1| PREDICTED: nogo-B
           receptor-like isoform 2 [Vitis vinifera]
           gi|297741434|emb|CBI32565.3| unnamed protein product
           [Vitis vinifera]
          Length = 255

 Score =  269 bits (687), Expect = 1e-69
 Identities = 131/249 (52%), Positives = 180/249 (72%), Gaps = 6/249 (2%)
 Frame = +3

Query: 237 VGEISCLFKKASIAMLRLVWLFLHLVATIWHFVMGTAQTLQSYLISSGIVNKYKAIDLTN 416
           V ++ C         L+++W FLH + ++W      A  L+S  ISSG++ +Y+A++L N
Sbjct: 7   VQKVYCWISHIGSLGLKVLWHFLHFIVSVWFLARQAAYVLESCFISSGLLKRYEALNLGN 66

Query: 417 LQYLAIVVESQEAYDMARVVKLLHWLSKIGVKHICLYDMDGVLKKTRKFILEKLGESRLW 596
           L+YLAIV+ES+EA+ + +V++LL+WL+ IGVKH+CLYD +GVLKK+++ ILEKL ++ L+
Sbjct: 67  LRYLAIVIESEEAHQIPKVIELLNWLATIGVKHVCLYDNEGVLKKSKEAILEKLTDATLF 126

Query: 597 HLEDGEKSSCLDETQRTLEFLSISDGKEGTAKAASHLCTKYLEVSD------EPTFTEES 758
              D E +  LD+   TLEF SISDGK    KAA+ L  KYL+ +D      E  FTE  
Sbjct: 127 EGVD-ENNLLLDQEHITLEFASISDGKGAVTKAANILFMKYLKSADSGGSSAESIFTEPH 185

Query: 759 MGEALRAVGCGGPQPNLLLVYGPVRCHLGFPAWRMRYTEIVHMGPLKSMKHGTLVKTVHK 938
           M EAL+AVGC GP P+LLL+YGP RCHLGFPAWR+RYTEI+HMGPLKSMK+G+L+K ++K
Sbjct: 186 MAEALKAVGCRGPDPDLLLIYGPARCHLGFPAWRIRYTEIIHMGPLKSMKYGSLLKAIYK 245

Query: 939 FAKVQQNYG 965
           F+ V QNYG
Sbjct: 246 FSMVHQNYG 254


>ref|XP_002519078.1| conserved hypothetical protein [Ricinus communis]
           gi|223541741|gb|EEF43289.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 243

 Score =  258 bits (660), Expect = 2e-66
 Identities = 127/232 (54%), Positives = 171/232 (73%), Gaps = 6/232 (2%)
 Frame = +3

Query: 282 LRLVWLFLHLVATIWHFVMGTAQTLQSYLISSGIVNKYKAIDLTNLQYLAIVVESQEAYD 461
           LRL+W F+HL+ ++W+   G AQ  +SYLIS+G++N+YK +D+  L+YLAIVVES++AY 
Sbjct: 13  LRLLWHFVHLLVSLWYLGAGIAQVTESYLISNGLLNRYKTLDVGKLRYLAIVVESEDAYQ 72

Query: 462 MARVVKLLHWLSKIGVKHICLYDMDGVLKKTRKFILEKLGESRLWHLEDG-EKSSCLDET 638
           ++ V++LL WL  IGVKH+CLYD +GVLKK++KFI+E+L  +    LE+  EK   LD  
Sbjct: 73  ISEVLQLLQWLEAIGVKHLCLYDSEGVLKKSKKFIIERLPNA--IQLEEAVEKDLPLDHK 130

Query: 639 QRTLEFLSISDGKEGTAKAASHLCTKYLE-----VSDEPTFTEESMGEALRAVGCGGPQP 803
             TLEF S+SDGKE  AKAA+ L   Y++     +  E   TE  M EALR +G  G  P
Sbjct: 131 HMTLEFASVSDGKEAIAKAANLLFMNYMKSAKTNIGQEEVITEAHMDEALRTLGYKGTDP 190

Query: 804 NLLLVYGPVRCHLGFPAWRMRYTEIVHMGPLKSMKHGTLVKTVHKFAKVQQN 959
           +LLLVYGPVRCHLGFPAWR+RYTEIVHMGPLKSM++G+L+K ++KF  V ++
Sbjct: 191 DLLLVYGPVRCHLGFPAWRIRYTEIVHMGPLKSMRYGSLIKAIYKFTTVNES 242


>ref|XP_004148090.1| PREDICTED: nogo-B receptor-like [Cucumis sativus]
           gi|449483980|ref|XP_004156749.1| PREDICTED: nogo-B
           receptor-like [Cucumis sativus]
          Length = 262

 Score =  243 bits (619), Expect = 1e-61
 Identities = 123/264 (46%), Positives = 178/264 (67%), Gaps = 5/264 (1%)
 Frame = +3

Query: 192 HIHLASIWMRNSKCNVGEISCLFKKASIAMLRLVWLFLHLVATIWHFVMGTAQTLQSYLI 371
           H HL      NS      I    +K  +  L+L+W FLH + + ++FV+G A TL+SYLI
Sbjct: 6   HFHLL-----NSPLGPMSIKVELQKIGLLGLQLIWHFLHFIVSAFYFVVGIATTLESYLI 60

Query: 372 SSGIVNKYKAIDLTNLQYLAIVVESQEAYDMARVVKLLHWLSKIGVKHICLYDMDGVLKK 551
           S G   KYK +++  +QYLAIVVES EAY+  ++++LL WL  +G++ +CLYD +GVLK+
Sbjct: 61  SWGFPCKYKHLNIDRVQYLAIVVESDEAYNTLKMIELLEWLVSLGIRSVCLYDAEGVLKQ 120

Query: 552 TRKFILEKLGESRLWHLEDGEKSSCLDETQRTLEFLSISDGKEGTAKAASHLCTKYLEVS 731
           +++ IL+K+  +     +  ++   L++   TLEF+S SDGKE  A+AA+ L       +
Sbjct: 121 SKEIILKKVKNAS--EFQGIDEPLQLNKKGITLEFISASDGKEAIARAANFLLQNKWRKT 178

Query: 732 D-----EPTFTEESMGEALRAVGCGGPQPNLLLVYGPVRCHLGFPAWRMRYTEIVHMGPL 896
           +     +   +E  M EAL+AVGCGG  P+L+LVYGP RCH GFPAWR+RYTEI+HMGPL
Sbjct: 179 NMSGDHKRCLSESQMTEALKAVGCGGLDPDLILVYGPTRCHFGFPAWRIRYTEILHMGPL 238

Query: 897 KSMKHGTLVKTVHKFAKVQQNYGK 968
           KSMK+G+L+K ++KF +V+QNYGK
Sbjct: 239 KSMKYGSLLKAIYKFTRVRQNYGK 262


>ref|NP_001242452.1| uncharacterized protein LOC100796301 [Glycine max]
           gi|255645054|gb|ACU23026.1| unknown [Glycine max]
          Length = 254

 Score =  229 bits (583), Expect = 2e-57
 Identities = 112/233 (48%), Positives = 162/233 (69%), Gaps = 5/233 (2%)
 Frame = +3

Query: 282 LRLVWLFLHLVATIWHFVMGTAQTLQSYLISSGIVNKYKAIDLTNLQYLAIVVESQEAYD 461
           L+L+W FL ++ + W+F+       +SY IS G++ KYK++    ++YLAIV+ES+EAY 
Sbjct: 22  LQLLWYFLRIILSAWYFISVVGNLFESYFISCGVLKKYKSLHSGKVRYLAIVIESEEAYQ 81

Query: 462 MARVVKLLHWLSKIGVKHICLYDMDGVLKKTRKFILEKLGESRLWHLEDGEKSSCLDETQ 641
           ++RVVKLL WL  IGVK++CLYDM+GVLKK+++ I ++L  ++    E  E  +  D   
Sbjct: 82  ISRVVKLLQWLDIIGVKNVCLYDMNGVLKKSKETIFKELKNAKSIE-EVNEVVALHDPDH 140

Query: 642 RTLEFLSISDGKEGTAKAASHLCTKYLEVSD-----EPTFTEESMGEALRAVGCGGPQPN 806
            TLEFLS +DGKE  AKAA+ +  ++L+  +     +    E  + EAL+ VG  GP+P+
Sbjct: 141 MTLEFLSYADGKEAVAKAANLIFVEHLKRHELGGELDLILLEPQLNEALQIVGSKGPEPD 200

Query: 807 LLLVYGPVRCHLGFPAWRMRYTEIVHMGPLKSMKHGTLVKTVHKFAKVQQNYG 965
           LLLVYGPVR HLGFPAWR+RYTEI+HMG L  +++G+L+K ++ F KV QNYG
Sbjct: 201 LLLVYGPVRSHLGFPAWRLRYTEIIHMGSLNFLRYGSLMKAIYNFTKVHQNYG 253


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