BLASTX nr result

ID: Coptis25_contig00017028 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00017028
         (1056 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002267129.1| PREDICTED: probable LRR receptor-like serine...   127   4e-27
ref|XP_002267620.2| PREDICTED: probable LRR receptor-like serine...   127   6e-27
emb|CBI20016.3| unnamed protein product [Vitis vinifera]              127   6e-27
emb|CBI39030.3| unnamed protein product [Vitis vinifera]              124   3e-26
ref|XP_002273016.1| PREDICTED: probable LRR receptor-like serine...   124   3e-26

>ref|XP_002267129.1| PREDICTED: probable LRR receptor-like serine/threonine-protein
           kinase At1g56130 [Vitis vinifera]
           gi|296081492|emb|CBI20015.3| unnamed protein product
           [Vitis vinifera]
          Length = 1031

 Score =  127 bits (320), Expect = 4e-27
 Identities = 67/123 (54%), Positives = 88/123 (71%), Gaps = 4/123 (3%)
 Frame = -1

Query: 357 SQAQTPTDPSEVRALRSIFQQWQIPLDTL--SDGNPCTSVAVDTTTTNI-ETNLGIKCNC 187
           ++A   TDPSEVR L SIFQQW I       + G PCT  A+D+T+ +  + N GIKC+C
Sbjct: 34  TEANATTDPSEVRVLNSIFQQWGISASNQWNTSGEPCTGAAIDSTSIDSSDYNPGIKCDC 93

Query: 186 TITNG-TCHITQLRVYGLNVRGVIPEELTSLPFLTYLNLDQNFLTGPLPAFLGNLSALRT 10
           +  N  TCHITQL+VY L+V GVIP+EL +L FLT LNL QN+LTGPL A +GNL++++ 
Sbjct: 94  SYDNASTCHITQLKVYALDVVGVIPDELWNLTFLTNLNLGQNYLTGPLSASIGNLTSMQY 153

Query: 9   LSV 1
           LS+
Sbjct: 154 LSM 156


>ref|XP_002267620.2| PREDICTED: probable LRR receptor-like serine/threonine-protein
           kinase At1g56130-like [Vitis vinifera]
          Length = 1031

 Score =  127 bits (318), Expect = 6e-27
 Identities = 66/123 (53%), Positives = 89/123 (72%), Gaps = 4/123 (3%)
 Frame = -1

Query: 357 SQAQTPTDPSEVRALRSIFQQWQIPLDTL--SDGNPCTSVAVDTTTTN-IETNLGIKCNC 187
           ++A   TDPSEVR L SIF+QW I   +   + G PCT  A+D+T+ +  + N GIKC+C
Sbjct: 34  TEANATTDPSEVRVLNSIFRQWGISASSQWRTIGEPCTGAAIDSTSIDSADYNFGIKCDC 93

Query: 186 TITNG-TCHITQLRVYGLNVRGVIPEELTSLPFLTYLNLDQNFLTGPLPAFLGNLSALRT 10
           +  N  TCHITQL+VY L+V GVIP+EL +L FLT LNL QN+LTGPL A +GNL++++ 
Sbjct: 94  SYDNASTCHITQLKVYALDVVGVIPDELWNLTFLTSLNLGQNYLTGPLSASIGNLTSMQY 153

Query: 9   LSV 1
           LS+
Sbjct: 154 LSL 156


>emb|CBI20016.3| unnamed protein product [Vitis vinifera]
          Length = 2193

 Score =  127 bits (318), Expect = 6e-27
 Identities = 66/123 (53%), Positives = 89/123 (72%), Gaps = 4/123 (3%)
 Frame = -1

Query: 357  SQAQTPTDPSEVRALRSIFQQWQIPLDTL--SDGNPCTSVAVDTTTTN-IETNLGIKCNC 187
            ++A   TDPSEVR L SIF+QW I   +   + G PCT  A+D+T+ +  + N GIKC+C
Sbjct: 1183 TEANATTDPSEVRVLNSIFRQWGISASSQWRTIGEPCTGAAIDSTSIDSADYNFGIKCDC 1242

Query: 186  TITNG-TCHITQLRVYGLNVRGVIPEELTSLPFLTYLNLDQNFLTGPLPAFLGNLSALRT 10
            +  N  TCHITQL+VY L+V GVIP+EL +L FLT LNL QN+LTGPL A +GNL++++ 
Sbjct: 1243 SYDNASTCHITQLKVYALDVVGVIPDELWNLTFLTSLNLGQNYLTGPLSASIGNLTSMQY 1302

Query: 9    LSV 1
            LS+
Sbjct: 1303 LSL 1305



 Score =  116 bits (290), Expect = 1e-23
 Identities = 63/122 (51%), Positives = 81/122 (66%), Gaps = 3/122 (2%)
 Frame = -1

Query: 357 SQAQTPTDPSEVRALRSIFQQWQIPLDTL--SDGNPCTSVAVDTTTTNIETNLGIKCNCT 184
           ++A   TDPSEV  L SIFQQW I       + G PCT  A+D+       N GIKC+C+
Sbjct: 100 TEANATTDPSEVTILNSIFQQWGISASNEWNTSGEPCTGAALDSADIK---NPGIKCDCS 156

Query: 183 ITNG-TCHITQLRVYGLNVRGVIPEELTSLPFLTYLNLDQNFLTGPLPAFLGNLSALRTL 7
             N  TCHITQL+VY L+V G IP+EL +L FLT LNL QN+LTG L A +GNL++++ L
Sbjct: 157 YDNASTCHITQLKVYALDVVGAIPDELWNLTFLTNLNLGQNYLTGSLSASIGNLTSMQYL 216

Query: 6   SV 1
           S+
Sbjct: 217 SL 218


>emb|CBI39030.3| unnamed protein product [Vitis vinifera]
          Length = 2282

 Score =  124 bits (312), Expect = 3e-26
 Identities = 67/124 (54%), Positives = 85/124 (68%), Gaps = 5/124 (4%)
 Frame = -1

Query: 357 SQAQTPT-DPSEVRALRSIFQQWQIPLDTLSD--GNPCTSVAVDTTT-TNIETNLGIKCN 190
           S A+  T DPSE  AL SIFQQW      L +  G PCT  A++ T   + + N  IKC+
Sbjct: 36  STAENATLDPSEAEALNSIFQQWDTQSVALWNISGEPCTGSAINGTAFESDDNNPAIKCD 95

Query: 189 CTITNGT-CHITQLRVYGLNVRGVIPEELTSLPFLTYLNLDQNFLTGPLPAFLGNLSALR 13
           C+  +GT CHITQLRVY LN +GVIPEEL +L +LT+L +DQN+ TGPLP+F+GNLS L 
Sbjct: 96  CSYDSGTTCHITQLRVYALNKKGVIPEELATLTYLTFLKIDQNYFTGPLPSFIGNLSKLS 155

Query: 12  TLSV 1
            LS+
Sbjct: 156 LLSI 159



 Score =  103 bits (257), Expect = 7e-20
 Identities = 57/113 (50%), Positives = 75/113 (66%), Gaps = 5/113 (4%)
 Frame = -1

Query: 324  VRALRSIFQQWQI---PLDTLSDGNPCTSVAVDTTTTNIETNL-GIKCNCTI-TNGTCHI 160
            + +L S+FQ+W I   PL  +S G PC+  A++ T    E N   IKC+C+  +N TCHI
Sbjct: 1319 IHSLNSLFQKWDIEAVPLWNIS-GEPCSGSAINGTEFESEANSPAIKCDCSYDSNTTCHI 1377

Query: 159  TQLRVYGLNVRGVIPEELTSLPFLTYLNLDQNFLTGPLPAFLGNLSALRTLSV 1
            TQLRV+ LN RGVI EE  +  +L  L LD+N+ TGPLP+F+GNLS L  LSV
Sbjct: 1378 TQLRVHALNKRGVIVEEFKAFTYLMVLKLDKNYFTGPLPSFIGNLSQLTYLSV 1430


>ref|XP_002273016.1| PREDICTED: probable LRR receptor-like serine/threonine-protein
           kinase At1g56130-like [Vitis vinifera]
          Length = 1048

 Score =  124 bits (312), Expect = 3e-26
 Identities = 67/124 (54%), Positives = 85/124 (68%), Gaps = 5/124 (4%)
 Frame = -1

Query: 357 SQAQTPT-DPSEVRALRSIFQQWQIPLDTLSD--GNPCTSVAVDTTT-TNIETNLGIKCN 190
           S A+  T DPSE  AL SIFQQW      L +  G PCT  A++ T   + + N  IKC+
Sbjct: 36  STAENATLDPSEAEALNSIFQQWDTQSVALWNISGEPCTGSAINGTAFESDDNNPAIKCD 95

Query: 189 CTITNGT-CHITQLRVYGLNVRGVIPEELTSLPFLTYLNLDQNFLTGPLPAFLGNLSALR 13
           C+  +GT CHITQLRVY LN +GVIPEEL +L +LT+L +DQN+ TGPLP+F+GNLS L 
Sbjct: 96  CSYDSGTTCHITQLRVYALNKKGVIPEELATLTYLTFLKIDQNYFTGPLPSFIGNLSKLS 155

Query: 12  TLSV 1
            LS+
Sbjct: 156 LLSI 159


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