BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00017005
         (509 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002308284.1| predicted protein [Populus trichocarpa] gi|2...   180   1e-43
ref|XP_002279464.2| PREDICTED: DNA repair protein recA homolog 3...   179   3e-43
ref|XP_004168169.1| PREDICTED: DNA repair protein recA homolog 3...   176   2e-42
ref|NP_179539.2| DNA repair protein recA-like 3 [Arabidopsis tha...   175   4e-42
ref|XP_003549233.1| PREDICTED: DNA repair protein recA homolog 3...   171   6e-41

>ref|XP_002308284.1| predicted protein [Populus trichocarpa] gi|222854260|gb|EEE91807.1|
           predicted protein [Populus trichocarpa]
          Length = 418

 Score =  180 bits (456), Expect = 1e-43
 Identities = 91/140 (65%), Positives = 109/140 (77%)
 Frame = +1

Query: 88  MARLLRNPFSLKQSLLATQVCRHAILGTSTQISNFXXXXXXXXXXXXXXXXXENLSKKDL 267
           MARLLRN  SL+++L+A +  R  +LGTSTQI NF                 EN+SKK+L
Sbjct: 1   MARLLRNASSLRRALVAPEGIRRGVLGTSTQICNFATKGKRKSKSDGSESGEENMSKKEL 60

Query: 268 ALKQAMDQITATFGKGAIMWLGRTASPRNVPVVSTGSFSLDLALGIGGLPKGRVVEIYGP 447
           AL+QA+DQIT+ FGKGAIMW GR+ +P+NVPVVSTGSF+LD+ALG GG PKGRVVEI+GP
Sbjct: 61  ALQQALDQITSQFGKGAIMWFGRSEAPKNVPVVSTGSFALDIALGCGGFPKGRVVEIFGP 120

Query: 448 EASGKTTLALHVIAESQKHG 507
           EASGKTTLALHVIAE+QK G
Sbjct: 121 EASGKTTLALHVIAEAQKQG 140


>ref|XP_002279464.2| PREDICTED: DNA repair protein recA homolog 3, mitochondrial-like
           [Vitis vinifera] gi|297738654|emb|CBI27899.3| unnamed
           protein product [Vitis vinifera]
          Length = 421

 Score =  179 bits (453), Expect = 3e-43
 Identities = 92/140 (65%), Positives = 107/140 (76%)
 Frame = +1

Query: 88  MARLLRNPFSLKQSLLATQVCRHAILGTSTQISNFXXXXXXXXXXXXXXXXXENLSKKDL 267
           MARLLRN  SL+ SL A +  R  +LGTS+Q  NF                 ENLSKK+L
Sbjct: 1   MARLLRNASSLRHSLFAVEGFRKGVLGTSSQFCNFSSKGRRRSKSDGSDSNEENLSKKEL 60

Query: 268 ALKQAMDQITATFGKGAIMWLGRTASPRNVPVVSTGSFSLDLALGIGGLPKGRVVEIYGP 447
           AL+QA+DQIT +FGKG+IMWLGR+ S ++VPVVSTGSF+LD+ LGIGGLPKGRVVEIYGP
Sbjct: 61  ALRQALDQITTSFGKGSIMWLGRSVSSKHVPVVSTGSFALDIVLGIGGLPKGRVVEIYGP 120

Query: 448 EASGKTTLALHVIAESQKHG 507
           EASGKTTLALHVIAE+QK G
Sbjct: 121 EASGKTTLALHVIAEAQKQG 140


>ref|XP_004168169.1| PREDICTED: DNA repair protein recA homolog 3, mitochondrial-like
           [Cucumis sativus]
          Length = 588

 Score =  176 bits (445), Expect = 2e-42
 Identities = 92/140 (65%), Positives = 105/140 (75%)
 Frame = +1

Query: 88  MARLLRNPFSLKQSLLATQVCRHAILGTSTQISNFXXXXXXXXXXXXXXXXXENLSKKDL 267
           MARL+RN   L +SL   +  R  ILGTSTQI NF                 + LSKK+L
Sbjct: 74  MARLIRNASFLGRSLFQREGYRRGILGTSTQICNFSTKGKPANSSDGSDSSEKKLSKKEL 133

Query: 268 ALKQAMDQITATFGKGAIMWLGRTASPRNVPVVSTGSFSLDLALGIGGLPKGRVVEIYGP 447
           AL+QA+ QIT TFGKG+IMWLGR+AS +NVPVVSTGSFSLD+ALG+GG PKGRV+EIYGP
Sbjct: 134 ALQQALGQITTTFGKGSIMWLGRSASSKNVPVVSTGSFSLDMALGVGGFPKGRVIEIYGP 193

Query: 448 EASGKTTLALHVIAESQKHG 507
           EASGKTTLALHVIAESQK G
Sbjct: 194 EASGKTTLALHVIAESQKQG 213


>ref|NP_179539.2| DNA repair protein recA-like 3 [Arabidopsis thaliana]
           gi|209572665|sp|Q9ZUP2.2|RECA3_ARATH RecName: Full=DNA
           repair protein recA homolog 3, mitochondrial; AltName:
           Full=Recombinase A homolog 3; Flags: Precursor
           gi|119935859|gb|ABM06015.1| At2g19490 [Arabidopsis
           thaliana] gi|330251794|gb|AEC06888.1| DNA repair protein
           recA-like 3 [Arabidopsis thaliana]
          Length = 430

 Score =  175 bits (443), Expect = 4e-42
 Identities = 86/140 (61%), Positives = 110/140 (78%)
 Frame = +1

Query: 88  MARLLRNPFSLKQSLLATQVCRHAILGTSTQISNFXXXXXXXXXXXXXXXXXENLSKKDL 267
           MAR+LRN +SL+ SL ++++ R +++GTS Q+  F                 E +SKK++
Sbjct: 1   MARILRNVYSLRSSLFSSELLRRSVVGTSFQLRGFAAKAKKKSKSDGNGSSEEGMSKKEI 60

Query: 268 ALKQAMDQITATFGKGAIMWLGRTASPRNVPVVSTGSFSLDLALGIGGLPKGRVVEIYGP 447
           AL+QA+DQIT++FGKG+IM+LGR  SPRNVPV STGSF+LD+ALG+GGLPKGRVVEIYGP
Sbjct: 61  ALQQALDQITSSFGKGSIMYLGRAVSPRNVPVFSTGSFALDVALGVGGLPKGRVVEIYGP 120

Query: 448 EASGKTTLALHVIAESQKHG 507
           EASGKTTLALHVIAE+QK G
Sbjct: 121 EASGKTTLALHVIAEAQKQG 140


>ref|XP_003549233.1| PREDICTED: DNA repair protein recA homolog 3, mitochondrial-like
           [Glycine max]
          Length = 459

 Score =  171 bits (433), Expect = 6e-41
 Identities = 91/140 (65%), Positives = 108/140 (77%)
 Frame = +1

Query: 88  MARLLRNPFSLKQSLLATQVCRHAILGTSTQISNFXXXXXXXXXXXXXXXXXENLSKKDL 267
           MARLLRN   L +SL   +V +  ++GTS QI +F                 EN+SKK+L
Sbjct: 27  MARLLRNTSLLTRSLFFPKVFKLGMIGTS-QILSFSSKGRRRSKSDGSDSGEENMSKKEL 85

Query: 268 ALKQAMDQITATFGKGAIMWLGRTASPRNVPVVSTGSFSLDLALGIGGLPKGRVVEIYGP 447
           AL+QA+DQIT+ FGKG+IMWLGR+ SP+NVPVVSTGSF+LD+ALGIGGLPKGRVVEIYGP
Sbjct: 86  ALQQALDQITSAFGKGSIMWLGRSVSPKNVPVVSTGSFALDVALGIGGLPKGRVVEIYGP 145

Query: 448 EASGKTTLALHVIAESQKHG 507
           EASGKTTLALHVIAE+QK G
Sbjct: 146 EASGKTTLALHVIAEAQKQG 165