BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00017000
         (1675 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002327176.1| f-box family protein [Populus trichocarpa] g...   640   0.0  
ref|XP_002510165.1| skip-2, putative [Ricinus communis] gi|22355...   637   e-180
ref|XP_004141272.1| PREDICTED: F-box protein At1g47056-like [Cuc...   622   e-176
ref|XP_002301165.1| f-box family protein [Populus trichocarpa] g...   620   e-175
ref|XP_002284998.1| PREDICTED: F-box protein At1g47056 [Vitis vi...   616   e-174

>ref|XP_002327176.1| f-box family protein [Populus trichocarpa]
            gi|222835491|gb|EEE73926.1| f-box family protein [Populus
            trichocarpa]
          Length = 534

 Score =  640 bits (1651), Expect = 0.0
 Identities = 328/477 (68%), Positives = 374/477 (78%), Gaps = 8/477 (1%)
 Frame = -2

Query: 1413 MGQSTSTPGI-------RSASKRSSIMNHQMIKSMAVIAPEENFTLVNRDIISDLPDELL 1255
            MGQS ST  I       RS+S RS       I  + V    E       D ISDLPDE L
Sbjct: 1    MGQSASTALITSRRDSNRSSSHRSKSKFTVPIMPVQVEEQTEFIFCEGPDYISDLPDECL 60

Query: 1254 ANIFHYLNSSDRNKCSLVCRRWFIIEGQSRTRLSLDARSDLVTSIQYLFSRFDSVSKLAL 1075
            A IF  LNS DR  CSLVCRRW  IEGQSR RLSL+A+SDL+  + +LFSRFDSV+KLAL
Sbjct: 61   ACIFQSLNSGDRKHCSLVCRRWLRIEGQSRHRLSLNAQSDLLPLVPFLFSRFDSVTKLAL 120

Query: 1074 KCDRRSVSIGDEALTLISLRCRNLTRLKLRACRELTDAGMLAFAKNCKGLKKLSCGSCTF 895
            KCDRRS SIGDEAL  IS RCRNLTRLKLR+CRELTDAGM AFAKNCK LKKLSCGSCTF
Sbjct: 121  KCDRRSTSIGDEALVAISSRCRNLTRLKLRSCRELTDAGMAAFAKNCKALKKLSCGSCTF 180

Query: 894  GVKGMNAILDHCSLLEELSVKRLRGLTDGSRAEPIGPGVAALSLKVICLKELYNGQCFGP 715
            G +GMNAILD+C+ LEELS+KRLRG+TDG+ AEP+GPG+AA SLK ICLKELYNGQCFGP
Sbjct: 181  GARGMNAILDNCASLEELSLKRLRGITDGAAAEPVGPGLAAASLKTICLKELYNGQCFGP 240

Query: 714  LIAGAKNLRSLKLFRCSGDWDVLLESISGRVRGLVEVHLERLQVSDRGLEAISSCLDLEI 535
            LI G+KNL++LKLFRCSGDWD LL+ IS RV G+VE+HLERLQVSD GL AIS+CL+LEI
Sbjct: 241  LIIGSKNLKTLKLFRCSGDWDKLLQVISDRVTGMVEIHLERLQVSDTGLAAISNCLNLEI 300

Query: 534  LHLVKTPECTNAGIVSIADRCKVLRKVHIDGWKTNRIGDEGFIAIARQCPKLQELVLIGV 355
            LHLVKTPECT+ G+VSIA+RC++LRK+H+DGWKTNRIGD+G  A+A+ CP LQELVLIGV
Sbjct: 301  LHLVKTPECTDTGLVSIAERCRLLRKLHVDGWKTNRIGDDGLSAVAKYCPNLQELVLIGV 360

Query: 354  SPTKLSLGLL-GNCRNLERLALCSSETIGDSEISCIAAKCVALKKLCIKGCPITNHAMEA 178
            +PTK+S+ LL  NC+NLERLALC S+T+GD+EISCIAAKCVALKKLCIK CP+++H MEA
Sbjct: 361  NPTKISVELLASNCQNLERLALCGSDTVGDAEISCIAAKCVALKKLCIKSCPVSDHGMEA 420

Query: 177  LVAGCPNLXXXXXXXXXXXXXXXXVWLRTFRQSLAVNLDVGASENLDASTSDGGPAE 7
            L  GCPNL                 WLRT R SLAVNLD G  E+ DAS SDGG  E
Sbjct: 421  LANGCPNLVKVKVKKCRAVTCECADWLRTKRGSLAVNLDCGEPEHQDASASDGGLLE 477


>ref|XP_002510165.1| skip-2, putative [Ricinus communis] gi|223550866|gb|EEF52352.1|
            skip-2, putative [Ricinus communis]
          Length = 536

 Score =  637 bits (1644), Expect = e-180
 Identities = 326/481 (67%), Positives = 382/481 (79%), Gaps = 12/481 (2%)
 Frame = -2

Query: 1413 MGQSTSTPGIRSASKRSSIMNHQMIKSMAVIAP---------EENFTLVNR--DIISDLP 1267
            MGQS+S+  I   ++R SI   +  KS A+I+P         ++   ++N   D ISDLP
Sbjct: 1    MGQSSSSTAI--LTRRESIYRSKS-KSTALISPMQTEEPNDKDDVVLIINESPDYISDLP 57

Query: 1266 DELLANIFHYLNSSDRNKCSLVCRRWFIIEGQSRTRLSLDARSDLVTSIQYLFSRFDSVS 1087
            DE LA IF  L+ SDR +CSLVCRRW  IEGQSR RLSL A+SDL+  I  LF+RFD+V+
Sbjct: 58   DECLACIFQSLSPSDRQRCSLVCRRWLRIEGQSRHRLSLHAQSDLLPVISALFTRFDAVT 117

Query: 1086 KLALKCDRRSVSIGDEALTLISLRCRNLTRLKLRACRELTDAGMLAFAKNCKGLKKLSCG 907
            KLAL+CDR+S SIGDEAL  ISLRCRNLTRLKLR+CR++TDAGM AFAKNCKGLKKLSCG
Sbjct: 118  KLALRCDRKSASIGDEALEAISLRCRNLTRLKLRSCRDVTDAGMAAFAKNCKGLKKLSCG 177

Query: 906  SCTFGVKGMNAILDHCSLLEELSVKRLRGLTDGSRAEPIGPGVAALSLKVICLKELYNGQ 727
            SCTFG KGMNA+LD+C+ LEELS+KRLRG+TDG+ AEPIGPG+AA SLK ICLKELYNGQ
Sbjct: 178  SCTFGAKGMNAVLDNCASLEELSIKRLRGITDGAAAEPIGPGLAANSLKTICLKELYNGQ 237

Query: 726  CFGPLIAGAKNLRSLKLFRCSGDWDVLLESISGRVRGLVEVHLERLQVSDRGLEAISSCL 547
            CFGPLI G+KNLR+LKLFRCSGDWD LL+ IS RV G+VE+HLERLQVSD GL AIS+CL
Sbjct: 238  CFGPLIIGSKNLRTLKLFRCSGDWDKLLQVISDRVTGMVEIHLERLQVSDVGLSAISNCL 297

Query: 546  DLEILHLVKTPECTNAGIVSIADRCKVLRKVHIDGWKTNRIGDEGFIAIARQCPKLQELV 367
            DLEILHLVKTPECTN G+ SIA+RCK+LRK+HIDGWK NRIGD+G IA+A+ CP LQELV
Sbjct: 298  DLEILHLVKTPECTNLGLGSIAERCKLLRKLHIDGWKANRIGDDGLIAVAKNCPNLQELV 357

Query: 366  LIGVSPTKLSLGLL-GNCRNLERLALCSSETIGDSEISCIAAKCVALKKLCIKGCPITNH 190
            LIGV+PTK SL +L  NC+NLERLALC S+T+GD+EISCIAAKC++LKKLCIK CP+++H
Sbjct: 358  LIGVNPTKSSLEMLASNCQNLERLALCGSDTVGDAEISCIAAKCISLKKLCIKSCPVSDH 417

Query: 189  AMEALVAGCPNLXXXXXXXXXXXXXXXXVWLRTFRQSLAVNLDVGASENLDASTSDGGPA 10
             MEAL +GCPNL                 WLR  R SLAVNLD G  E+ DAS SDGG  
Sbjct: 418  GMEALASGCPNLVKVKVKKCRGVTCEGADWLRASRGSLAVNLDSGEHEHHDASASDGGVQ 477

Query: 9    E 7
            E
Sbjct: 478  E 478


>ref|XP_004141272.1| PREDICTED: F-box protein At1g47056-like [Cucumis sativus]
            gi|449515093|ref|XP_004164584.1| PREDICTED: F-box protein
            At1g47056-like [Cucumis sativus]
          Length = 535

 Score =  622 bits (1604), Expect = e-176
 Identities = 326/476 (68%), Positives = 374/476 (78%), Gaps = 10/476 (2%)
 Frame = -2

Query: 1413 MGQSTSTPGIRSASKRSSIMNHQM-IKSMAVIAP------EENFTLVN--RDIISDLPDE 1261
            MGQS S+  I   S+R S  +H+  IKS A+I+P      ++   +++   D ISDLPDE
Sbjct: 1    MGQSASSAAI--LSRRDSNHSHRSKIKSTALISPMHLDETDDVQEIIHGASDFISDLPDE 58

Query: 1260 LLANIFHYLNSSDRNKCSLVCRRWFIIEGQSRTRLSLDARSDLVTSIQYLFSRFDSVSKL 1081
             LA IF  L+S DR  CSLVCRRWF +EGQSR RLSL A +DL + I  LF+RFD+V+KL
Sbjct: 59   CLACIFQSLSSVDRKGCSLVCRRWFKVEGQSRHRLSLKAEADLSSMIPSLFTRFDAVTKL 118

Query: 1080 ALKCDRRSVSIGDEALTLISLRCRNLTRLKLRACRELTDAGMLAFAKNCKGLKKLSCGSC 901
            ALKCDRRS SI D++L LISLRCRNLTRLKLRACRELTD GM AFAKNCKGLKKLSCGSC
Sbjct: 119  ALKCDRRSTSIRDDSLILISLRCRNLTRLKLRACRELTDVGMAAFAKNCKGLKKLSCGSC 178

Query: 900  TFGVKGMNAILDHCSLLEELSVKRLRGLTDGSRAEPIGPGVAALSLKVICLKELYNGQCF 721
            TFG KGMNA+LD+CS LEELSVKRLRG+TD S AEPIGPG+A  SLK ICLK+LYN QCF
Sbjct: 179  TFGAKGMNAVLDNCSALEELSVKRLRGITD-STAEPIGPGIAGSSLKTICLKDLYNAQCF 237

Query: 720  GPLIAGAKNLRSLKLFRCSGDWDVLLESISGRVRGLVEVHLERLQVSDRGLEAISSCLDL 541
            GPL+ GAK+LR+LKLFRCSGDWD LL  I+ RV GLVEVHLERLQVSD GL AIS+CLDL
Sbjct: 238  GPLLIGAKSLRTLKLFRCSGDWDALLRVIADRVTGLVEVHLERLQVSDVGLSAISNCLDL 297

Query: 540  EILHLVKTPECTNAGIVSIADRCKVLRKVHIDGWKTNRIGDEGFIAIARQCPKLQELVLI 361
            EILHLVKTPECTN GIV++A+RCK+LRK+HIDGWK NRIGDEG +A+AR C  LQELVLI
Sbjct: 298  EILHLVKTPECTNLGIVALAERCKLLRKLHIDGWKANRIGDEGLVAVARNCSNLQELVLI 357

Query: 360  GVSPTKLSLGLL-GNCRNLERLALCSSETIGDSEISCIAAKCVALKKLCIKGCPITNHAM 184
            GV+PTK+SL +L  NCRNLERLALC S+T+GDSEISCIAAKC+ALKKLCIK CP+++  M
Sbjct: 358  GVNPTKVSLEILASNCRNLERLALCGSDTVGDSEISCIAAKCIALKKLCIKSCPVSDQGM 417

Query: 183  EALVAGCPNLXXXXXXXXXXXXXXXXVWLRTFRQSLAVNLDVGASENLDASTSDGG 16
            EAL  GCPNL                  LR  R SLAVNLD G  E+ DAS S+GG
Sbjct: 418  EALAEGCPNLVKVKVKKCRGVTPEGADSLRLSRGSLAVNLDSGEPEHPDASASEGG 473


>ref|XP_002301165.1| f-box family protein [Populus trichocarpa]
            gi|222842891|gb|EEE80438.1| f-box family protein [Populus
            trichocarpa]
          Length = 533

 Score =  620 bits (1599), Expect = e-175
 Identities = 320/478 (66%), Positives = 374/478 (78%), Gaps = 9/478 (1%)
 Frame = -2

Query: 1413 MGQSTSTPGIRSASKRSSIMNHQMIKSMAVIA-------PEENFTLVNR-DIISDLPDEL 1258
            MGQ+TST  I   S+R S ++ Q  KS   +         +  + LV   D ISDLPDE 
Sbjct: 1    MGQTTSTALI--TSRRDSNLSSQRSKSKFTVPIIPMQVEEQTEYVLVEAPDYISDLPDEC 58

Query: 1257 LANIFHYLNSSDRNKCSLVCRRWFIIEGQSRTRLSLDARSDLVTSIQYLFSRFDSVSKLA 1078
            LA IF  L+S DR  CSLVCRRW  IEGQSR RLSL+A+SDL+  +  LFSRFD+V+KLA
Sbjct: 59   LACIFQSLSSGDRKSCSLVCRRWLRIEGQSRHRLSLNAQSDLLPFVTSLFSRFDAVTKLA 118

Query: 1077 LKCDRRSVSIGDEALTLISLRCRNLTRLKLRACRELTDAGMLAFAKNCKGLKKLSCGSCT 898
            LKCDRRSVSIGDEAL  IS+RCRNLTRLKLRACRE+TDAGM AFAKNCK LKK SCGSC 
Sbjct: 119  LKCDRRSVSIGDEALVAISIRCRNLTRLKLRACREITDAGMAAFAKNCKALKKFSCGSCA 178

Query: 897  FGVKGMNAILDHCSLLEELSVKRLRGLTDGSRAEPIGPGVAALSLKVICLKELYNGQCFG 718
            FG KGMNA+LD+C+ LE+LSVKRLRG+TDG+ AEPIGPG+AA SLK ICLKELYNGQCFG
Sbjct: 179  FGAKGMNAMLDNCASLEDLSVKRLRGITDGATAEPIGPGLAAASLKTICLKELYNGQCFG 238

Query: 717  PLIAGAKNLRSLKLFRCSGDWDVLLESISGRVRGLVEVHLERLQVSDRGLEAISSCLDLE 538
            PLI G+KNL++LKLFRCSGDWD LL+ I+ RV G+VE+HLERLQVSD GL AIS+CL+LE
Sbjct: 239  PLIIGSKNLKTLKLFRCSGDWDKLLQVIADRVTGMVEIHLERLQVSDTGLVAISNCLNLE 298

Query: 537  ILHLVKTPECTNAGIVSIADRCKVLRKVHIDGWKTNRIGDEGFIAIARQCPKLQELVLIG 358
            ILHLVKTPECT+ G+VSIA+RC++LRK+HIDGWK +RIGD+G +A+A+ C  LQELVLIG
Sbjct: 299  ILHLVKTPECTDIGLVSIAERCRLLRKLHIDGWKAHRIGDDGLMAVAKYCLNLQELVLIG 358

Query: 357  VSPTKLSLGLL-GNCRNLERLALCSSETIGDSEISCIAAKCVALKKLCIKGCPITNHAME 181
            V+PT++SL LL  NC+NLERLALC S+T+GD EISCIAAKCVALKKLCIK CP+++H +E
Sbjct: 359  VNPTQISLELLASNCQNLERLALCGSDTVGDVEISCIAAKCVALKKLCIKSCPVSDHGLE 418

Query: 180  ALVAGCPNLXXXXXXXXXXXXXXXXVWLRTFRQSLAVNLDVGASENLDASTSDGGPAE 7
            AL  GCPNL                  LR  R SLAVNLD G  E+ DAS SDGG  E
Sbjct: 419  ALANGCPNLVKVKVKKCRAVTYECADLLRMKRGSLAVNLDSGEPEHQDASASDGGVQE 476


>ref|XP_002284998.1| PREDICTED: F-box protein At1g47056 [Vitis vinifera]
          Length = 541

 Score =  616 bits (1589), Expect = e-174
 Identities = 325/479 (67%), Positives = 371/479 (77%), Gaps = 10/479 (2%)
 Frame = -2

Query: 1413 MGQSTSTPGIRSASKR--SSIMNHQMIKSMAVIAP---EEN--FTLVNRDI--ISDLPDE 1261
            MGQS ST  I S S R  S+  +    KSM  I     EEN  F  ++ D+  ISDLPDE
Sbjct: 1    MGQSASTSAISSGSSRRGSNHPHRSRSKSMVQIPSMQVEENVQFRQIDEDLDYISDLPDE 60

Query: 1260 LLANIFHYLNSSDRNKCSLVCRRWFIIEGQSRTRLSLDARSDLVTSIQYLFSRFDSVSKL 1081
             LA IF  L S DR +CSLVCRRW  IEGQ+R RLSL+A SDL+T +  LFSRFD+V+KL
Sbjct: 61   CLACIFQSLGSGDRKQCSLVCRRWLRIEGQTRHRLSLNAHSDLLTVVPSLFSRFDAVTKL 120

Query: 1080 ALKCDRRSVSIGDEALTLISLRCRNLTRLKLRACRELTDAGMLAFAKNCKGLKKLSCGSC 901
            ALKCDRRSVSIGD+AL LISL CRNLTRLKLRACRELTDAGM  FAKNCKGLKKLSCGSC
Sbjct: 121  ALKCDRRSVSIGDDALILISLGCRNLTRLKLRACRELTDAGMGVFAKNCKGLKKLSCGSC 180

Query: 900  TFGVKGMNAILDHCSLLEELSVKRLRGLTDGSRAEPIGPGVAALSLKVICLKELYNGQCF 721
            TFG KGM+A+LD+CS LEELSVKRLRG++DGS  + IGPGVAA SLK ICLKE YNGQCF
Sbjct: 181  TFGAKGMSAVLDNCSALEELSVKRLRGISDGSAVDQIGPGVAASSLKTICLKEQYNGQCF 240

Query: 720  GPLIAGAKNLRSLKLFRCSGDWDVLLESISGRVRGLVEVHLERLQVSDRGLEAISSCLDL 541
             PLI GAKNLR+LKLFRCSGD D LL+ ++ R   +VE+HLERLQVSD GL AIS  LDL
Sbjct: 241  WPLIIGAKNLRTLKLFRCSGDCDNLLQLVANRTTSMVEIHLERLQVSDLGLVAISHFLDL 300

Query: 540  EILHLVKTPECTNAGIVSIADRCKVLRKVHIDGWKTNRIGDEGFIAIARQCPKLQELVLI 361
            EILHLVKT ECTNAG+VS+A+RCK+LRK+HIDGWK NRIGDEG  A+A+ CP LQELVLI
Sbjct: 301  EILHLVKTSECTNAGLVSVAERCKLLRKLHIDGWKANRIGDEGLSAVAKCCPNLQELVLI 360

Query: 360  GVSPTKLSLGLL-GNCRNLERLALCSSETIGDSEISCIAAKCVALKKLCIKGCPITNHAM 184
            GV+PTKLSL +L  NC+NLERLALC+S+T+GD+EISCIAAKC+ALKKLCIK CP+++  M
Sbjct: 361  GVNPTKLSLEMLAANCQNLERLALCASDTVGDAEISCIAAKCLALKKLCIKSCPVSDQGM 420

Query: 183  EALVAGCPNLXXXXXXXXXXXXXXXXVWLRTFRQSLAVNLDVGASENLDASTSDGGPAE 7
             AL  GCPNL                  LR  R+SLAVNLD G +E+ DAS SDGG  E
Sbjct: 421  RALACGCPNLVKVKVKKCRAVTYEGADGLRASRESLAVNLDTGETEHQDASASDGGAQE 479