BLASTX nr result

ID: Coptis25_contig00016974 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00016974
         (1014 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002279012.1| PREDICTED: uncharacterized protein LOC100249...   260   4e-67
emb|CAN67684.1| hypothetical protein VITISV_009913 [Vitis vinifera]   260   4e-67
ref|XP_002309200.1| predicted protein [Populus trichocarpa] gi|2...   221   3e-55
ref|XP_003547491.1| PREDICTED: uncharacterized protein LOC100815...   206   6e-51
gb|AFW83741.1| hypothetical protein ZEAMMB73_439096 [Zea mays]        206   7e-51

>ref|XP_002279012.1| PREDICTED: uncharacterized protein LOC100249046 [Vitis vinifera]
          Length = 1152

 Score =  260 bits (664), Expect = 4e-67
 Identities = 138/198 (69%), Positives = 146/198 (73%), Gaps = 1/198 (0%)
 Frame = -2

Query: 962  RCGLLGNNFTVALMVQLRNPLRNYEPVGTPMLALIQVERVFVPPKPKIYCTVPXXXXXXX 783
            +CGLLGNNFTVALMVQLR+PLRNYEPVGTPMLALIQVERVFVPPKPKIY TV        
Sbjct: 954  KCGLLGNNFTVALMVQLRDPLRNYEPVGTPMLALIQVERVFVPPKPKIYSTVSVVGNSKE 1013

Query: 782  XXXDTEPLA-EDAXXXXXXXXXXXXESVAQFKITEVHVAGLKTEPGKKKLWGTSKQQQSG 606
               ++  +A ED             E++ QFKITEVHVAGLKTEPGKKKLWGTS QQQSG
Sbjct: 1014 EDDESVSVAKEDVKDEKKEEQISEEEAIPQFKITEVHVAGLKTEPGKKKLWGTSTQQQSG 1073

Query: 605  SRWLAATGMGKSNKHPFMXXXXXXXXXXXXXXXXXXXXQPGETLWSISSRVHGTGAKWKE 426
            SRWL A GMGK+NKHPFM                    QPGETLWSISSRVHGTGAKWKE
Sbjct: 1074 SRWLLANGMGKNNKHPFM----KSKAVSKSTSPATTTVQPGETLWSISSRVHGTGAKWKE 1129

Query: 425  LAALNPHIRNPNVIFPNE 372
            LAALNPHIRNPNVIFPNE
Sbjct: 1130 LAALNPHIRNPNVIFPNE 1147


>emb|CAN67684.1| hypothetical protein VITISV_009913 [Vitis vinifera]
          Length = 1134

 Score =  260 bits (664), Expect = 4e-67
 Identities = 139/198 (70%), Positives = 147/198 (74%), Gaps = 1/198 (0%)
 Frame = -2

Query: 962  RCGLLGNNFTVALMVQLRNPLRNYEPVGTPMLALIQVERVFVPPKPKIYCTVPXXXXXXX 783
            +CGLLGNNFTVALMVQLR+PLRNYEPVGTPMLALIQVERVFVPPKPKIY TV        
Sbjct: 936  KCGLLGNNFTVALMVQLRDPLRNYEPVGTPMLALIQVERVFVPPKPKIYSTVSXVGNSKE 995

Query: 782  XXXDTEPLA-EDAXXXXXXXXXXXXESVAQFKITEVHVAGLKTEPGKKKLWGTSKQQQSG 606
               ++  +A ED             E++ QFKITEVHVAGLKTEPGKKKLWGTS QQQSG
Sbjct: 996  EDDESVSVAKEDVKDEKKEEQISEEEAIPQFKITEVHVAGLKTEPGKKKLWGTSTQQQSG 1055

Query: 605  SRWLAATGMGKSNKHPFMXXXXXXXXXXXXXXXXXXXXQPGETLWSISSRVHGTGAKWKE 426
            SRWL A GMGK+NKHPFM                    QPGETLWSISSRVHGTGAKWKE
Sbjct: 1056 SRWLLANGMGKNNKHPFM----KSKAVSKSTSPATTTVQPGETLWSISSRVHGTGAKWKE 1111

Query: 425  LAALNPHIRNPNVIFPNE 372
            LAALNPHIRNPNVIFPNE
Sbjct: 1112 LAALNPHIRNPNVIFPNE 1129


>ref|XP_002309200.1| predicted protein [Populus trichocarpa] gi|222855176|gb|EEE92723.1|
            predicted protein [Populus trichocarpa]
          Length = 1122

 Score =  221 bits (562), Expect = 3e-55
 Identities = 116/196 (59%), Positives = 131/196 (66%)
 Frame = -2

Query: 962  RCGLLGNNFTVALMVQLRNPLRNYEPVGTPMLALIQVERVFVPPKPKIYCTVPXXXXXXX 783
            +CGLLGNNFTVALMVQLR+PLRNYEPVGTPMLALIQVERVFVPPKPKIYC V        
Sbjct: 935  KCGLLGNNFTVALMVQLRDPLRNYEPVGTPMLALIQVERVFVPPKPKIYCKVSELRNNDE 994

Query: 782  XXXDTEPLAEDAXXXXXXXXXXXXESVAQFKITEVHVAGLKTEPGKKKLWGTSKQQQSGS 603
               ++E + +              E + Q++ITEVHVAG+K+EPGKKKLWGT+ QQQSGS
Sbjct: 995  EDDESESVVKQEVEKQTSEKALEEEGIPQYQITEVHVAGMKSEPGKKKLWGTTSQQQSGS 1054

Query: 602  RWLAATGMGKSNKHPFMXXXXXXXXXXXXXXXXXXXXQPGETLWSISSRVHGTGAKWKEL 423
            RWL A GMGK NKH                       Q G++LWS+SSR HGTGAKWKE 
Sbjct: 1055 RWLLANGMGKGNKH---STTKSKGVSTKSAPPLTTKVQRGDSLWSVSSRFHGTGAKWKE- 1110

Query: 422  AALNPHIRNPNVIFPN 375
                PH RNPNVIFPN
Sbjct: 1111 ----PHKRNPNVIFPN 1122


>ref|XP_003547491.1| PREDICTED: uncharacterized protein LOC100815106 [Glycine max]
          Length = 1174

 Score =  206 bits (525), Expect = 6e-51
 Identities = 115/200 (57%), Positives = 129/200 (64%), Gaps = 2/200 (1%)
 Frame = -2

Query: 968  SNRCGLLGNNFTVALMVQLRNPLRNYEPVGTPMLALIQVERVFVPPKPKIYCTVPXXXXX 789
            S RCGLLGNNFTVALMVQLR+PLRNYEPVGTPMLALIQVER F+ PK +I+ +V      
Sbjct: 977  SRRCGLLGNNFTVALMVQLRDPLRNYEPVGTPMLALIQVEREFMLPKQRIFDSVSEIRKN 1036

Query: 788  XXXXXDTEPLA--EDAXXXXXXXXXXXXESVAQFKITEVHVAGLKTEPGKKKLWGTSKQQ 615
                 ++E +A  E              E + QF+ITEVHVAGLK EP KKKLWGTS QQ
Sbjct: 1037 YDEDDESEIVAKVEMKDTEKEEKSSEEDEGIPQFRITEVHVAGLKPEPQKKKLWGTSSQQ 1096

Query: 614  QSGSRWLAATGMGKSNKHPFMXXXXXXXXXXXXXXXXXXXXQPGETLWSISSRVHGTGAK 435
            QSGSRWL A GMGKSN    +                      G++LWSISSR+ G   K
Sbjct: 1097 QSGSRWLLANGMGKSNNK--LSLMKSKAASKSNAPVTTKGQPGGDSLWSISSRIDGARGK 1154

Query: 434  WKELAALNPHIRNPNVIFPN 375
            WKELAALNPHIRNPNVI PN
Sbjct: 1155 WKELAALNPHIRNPNVIIPN 1174


>gb|AFW83741.1| hypothetical protein ZEAMMB73_439096 [Zea mays]
          Length = 1148

 Score =  206 bits (524), Expect = 7e-51
 Identities = 116/203 (57%), Positives = 125/203 (61%), Gaps = 3/203 (1%)
 Frame = -2

Query: 968  SNRCGLLGNNFTVALMVQLRNPLRNYEPVGTPMLALIQVERVFVPPKPKIYCTVPXXXXX 789
            S R GLLGNNFTVALMVQLR+PLRNYEPVGTPM ALIQVERVFVPPKPKIY TV      
Sbjct: 951  SGRWGLLGNNFTVALMVQLRDPLRNYEPVGTPMFALIQVERVFVPPKPKIYSTV--SDKG 1008

Query: 788  XXXXXDTEPLAE---DAXXXXXXXXXXXXESVAQFKITEVHVAGLKTEPGKKKLWGTSKQ 618
                 D EP AE   D             + V QFK+TEVHVAG K+EP K K WG   Q
Sbjct: 1009 NSEQDDEEPKAEEVPDKALVTEEKAEELEDPVPQFKVTEVHVAGFKSEPEKTKPWGNQTQ 1068

Query: 617  QQSGSRWLAATGMGKSNKHPFMXXXXXXXXXXXXXXXXXXXXQPGETLWSISSRVHGTGA 438
            QQSGSRWL A GMGK NKHP M                    Q G+TLWSISSRVHG G 
Sbjct: 1069 QQSGSRWLLAAGMGKGNKHPLM------KSKAVVKPTKEAAGQAGDTLWSISSRVHGAGT 1122

Query: 437  KWKELAALNPHIRNPNVIFPNEK 369
            +W ELA    H RNPN++   +K
Sbjct: 1123 RWSELAGNKSHSRNPNIMLQKDK 1145


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