BLASTX nr result
ID: Coptis25_contig00016973
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis25_contig00016973
(634 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002329719.1| predicted protein [Populus trichocarpa] gi|2... 112 7e-35
ref|XP_004136664.1| PREDICTED: uncharacterized protein At2g41620... 113 2e-34
ref|XP_002317735.1| predicted protein [Populus trichocarpa] gi|2... 104 6e-33
ref|XP_002519809.1| nuclear pore complex protein nup93, putative... 105 8e-33
gb|EEC75253.1| hypothetical protein OsI_11561 [Oryza sativa Indi... 104 3e-31
>ref|XP_002329719.1| predicted protein [Populus trichocarpa] gi|222870627|gb|EEF07758.1|
predicted protein [Populus trichocarpa]
Length = 863
Score = 112 bits (281), Expect(3) = 7e-35
Identities = 62/125 (49%), Positives = 75/125 (60%)
Frame = -1
Query: 409 LIRQYGAAYLRSANXXXXXXXXXXXXXXXXXXXLSWTRQANSH*QWRKSLMLKQLLLSCC 230
+IRQYG+AYLR N SWT + N Q ++S+MLKQLL
Sbjct: 571 IIRQYGSAYLRHGNLSMALEYYAQAAATVGGGEASWTGRGNIDQQRQRSMMLKQLLTELL 630
Query: 229 YEMAVFLCYLGLGSVGEEGEFRRFLTNRKDQQQFLLEAARQCQEAGLSEKSVELHKRIGA 50
LG GEEGE RFLT+ K++QQFLLEAAR+CQEAGL EKS+E+ KR+GA
Sbjct: 631 LRDGGIHLLLGPRGAGEEGELARFLTDSKERQQFLLEAARKCQEAGLDEKSIEIQKRVGA 690
Query: 49 FSMAL 35
FSMAL
Sbjct: 691 FSMAL 695
Score = 47.0 bits (110), Expect(3) = 7e-35
Identities = 20/31 (64%), Positives = 27/31 (87%)
Frame = -3
Query: 545 KETRDEGFDIDSVHISIVLADYGVLMEGAGS 453
KE DEG++I++VH+SI LAD+GVL EGAG+
Sbjct: 525 KEAADEGYNINAVHVSIALADHGVLTEGAGA 555
Score = 33.9 bits (76), Expect(3) = 7e-35
Identities = 13/13 (100%), Positives = 13/13 (100%)
Frame = -2
Query: 633 YYTKNGKDPLVYP 595
YYTKNGKDPLVYP
Sbjct: 495 YYTKNGKDPLVYP 507
>ref|XP_004136664.1| PREDICTED: uncharacterized protein At2g41620-like [Cucumis sativus]
gi|449494745|ref|XP_004159635.1| PREDICTED:
uncharacterized protein At2g41620-like [Cucumis sativus]
Length = 863
Score = 113 bits (283), Expect(3) = 2e-34
Identities = 62/130 (47%), Positives = 78/130 (60%)
Frame = -1
Query: 409 LIRQYGAAYLRSANXXXXXXXXXXXXXXXXXXXLSWTRQANSH*QWRKSLMLKQLLLSCC 230
+IRQYG+ YLR N LSW+ + + Q +++LMLKQLL
Sbjct: 571 IIRQYGSLYLRMGNLSMALEYYAQAAAALGGGQLSWSSRGSMDQQRQRTLMLKQLLTELL 630
Query: 229 YEMAVFLCYLGLGSVGEEGEFRRFLTNRKDQQQFLLEAARQCQEAGLSEKSVELHKRIGA 50
LG GEEGE RRF+T+ K +QQFLLEAARQCQEAGL +KS+E+HKR+GA
Sbjct: 631 LRDGGIYLLLGARGAGEEGELRRFMTDMKSRQQFLLEAARQCQEAGLYDKSIEIHKRVGA 690
Query: 49 FSMALMEVPR 20
FSMAL + R
Sbjct: 691 FSMALDTINR 700
Score = 45.1 bits (105), Expect(3) = 2e-34
Identities = 21/31 (67%), Positives = 25/31 (80%)
Frame = -3
Query: 545 KETRDEGFDIDSVHISIVLADYGVLMEGAGS 453
KET +EG +ID+ HISIVLAD GVL EG G+
Sbjct: 525 KETGEEGLNIDAAHISIVLADNGVLSEGTGA 555
Score = 33.9 bits (76), Expect(3) = 2e-34
Identities = 13/13 (100%), Positives = 13/13 (100%)
Frame = -2
Query: 633 YYTKNGKDPLVYP 595
YYTKNGKDPLVYP
Sbjct: 495 YYTKNGKDPLVYP 507
>ref|XP_002317735.1| predicted protein [Populus trichocarpa] gi|222858408|gb|EEE95955.1|
predicted protein [Populus trichocarpa]
Length = 863
Score = 104 bits (260), Expect(3) = 6e-33
Identities = 59/125 (47%), Positives = 72/125 (57%)
Frame = -1
Query: 409 LIRQYGAAYLRSANXXXXXXXXXXXXXXXXXXXLSWTRQANSH*QWRKSLMLKQLLLSCC 230
+IRQYG+AYL N SWT + N Q ++SLMLKQLL
Sbjct: 571 IIRQYGSAYLHHGNLSMALEYYAQAAATVGGGETSWTGRGNIDQQRQRSLMLKQLLTELL 630
Query: 229 YEMAVFLCYLGLGSVGEEGEFRRFLTNRKDQQQFLLEAARQCQEAGLSEKSVELHKRIGA 50
LG GEEGE RFL + + +QQFLLEAAR+CQEAGL EKS+E+ KR+GA
Sbjct: 631 LRDGGIYFLLGPRGAGEEGELARFLIDFQARQQFLLEAARKCQEAGLDEKSIEIQKRVGA 690
Query: 49 FSMAL 35
F+MAL
Sbjct: 691 FAMAL 695
Score = 48.5 bits (114), Expect(3) = 6e-33
Identities = 21/31 (67%), Positives = 26/31 (83%)
Frame = -3
Query: 545 KETRDEGFDIDSVHISIVLADYGVLMEGAGS 453
+E DEG+DID+VHISI LAD+GVL EG G+
Sbjct: 525 REAADEGYDIDAVHISIALADHGVLTEGGGA 555
Score = 33.9 bits (76), Expect(3) = 6e-33
Identities = 13/13 (100%), Positives = 13/13 (100%)
Frame = -2
Query: 633 YYTKNGKDPLVYP 595
YYTKNGKDPLVYP
Sbjct: 495 YYTKNGKDPLVYP 507
>ref|XP_002519809.1| nuclear pore complex protein nup93, putative [Ricinus communis]
gi|223541048|gb|EEF42605.1| nuclear pore complex protein
nup93, putative [Ricinus communis]
Length = 710
Score = 105 bits (263), Expect(3) = 8e-33
Identities = 60/125 (48%), Positives = 73/125 (58%)
Frame = -1
Query: 409 LIRQYGAAYLRSANXXXXXXXXXXXXXXXXXXXLSWTRQANSH*QWRKSLMLKQLLLSCC 230
+IRQYG+ YLR N +SWT + N Q ++SLMLKQLL
Sbjct: 540 IIRQYGSTYLRRGNLLGALEYYAQAAAAVGGGEVSWTGRGNVDQQRQRSLMLKQLLTELL 599
Query: 229 YEMAVFLCYLGLGSVGEEGEFRRFLTNRKDQQQFLLEAARQCQEAGLSEKSVELHKRIGA 50
LG GEEGE RFL + + +QQFLLEAARQCQEAGL +KS+E+ KR+GA
Sbjct: 600 LRDGGIYLLLGPRGAGEEGELVRFLNDFRVRQQFLLEAARQCQEAGLYDKSIEIQKRVGA 659
Query: 49 FSMAL 35
FSMAL
Sbjct: 660 FSMAL 664
Score = 47.0 bits (110), Expect(3) = 8e-33
Identities = 21/31 (67%), Positives = 27/31 (87%)
Frame = -3
Query: 545 KETRDEGFDIDSVHISIVLADYGVLMEGAGS 453
KE DEG+DID+VH++IVLAD+GVL E AG+
Sbjct: 494 KEVADEGYDIDAVHMAIVLADHGVLSEVAGA 524
Score = 33.9 bits (76), Expect(3) = 8e-33
Identities = 13/13 (100%), Positives = 13/13 (100%)
Frame = -2
Query: 633 YYTKNGKDPLVYP 595
YYTKNGKDPLVYP
Sbjct: 464 YYTKNGKDPLVYP 476
>gb|EEC75253.1| hypothetical protein OsI_11561 [Oryza sativa Indica Group]
Length = 870
Score = 104 bits (259), Expect(3) = 3e-31
Identities = 56/137 (40%), Positives = 79/137 (57%)
Frame = -1
Query: 436 DGCFCGSCDLIRQYGAAYLRSANXXXXXXXXXXXXXXXXXXXLSWTRQANSH*QWRKSLM 257
D C + +IRQYG+ YLR+ N +SW + N+ Q +++LM
Sbjct: 571 DAC-AEAASIIRQYGSIYLRNGNLDLALEYYAQSAAAMGGGEVSWIGRGNADQQRQRNLM 629
Query: 256 LKQLLLSCCYEMAVFLCYLGLGSVGEEGEFRRFLTNRKDQQQFLLEAARQCQEAGLSEKS 77
LKQLL LG +GEEGE ++++ + + +QQFLLEAA QC EAGL +KS
Sbjct: 630 LKQLLTEILLRDGGIQLLLGPSGMGEEGELKKYMMDWRSRQQFLLEAAHQCHEAGLYDKS 689
Query: 76 VELHKRIGAFSMALMEV 26
VE+HKR+GAF+MAL +
Sbjct: 690 VEIHKRVGAFAMALQTI 706
Score = 43.1 bits (100), Expect(3) = 3e-31
Identities = 18/31 (58%), Positives = 25/31 (80%)
Frame = -3
Query: 545 KETRDEGFDIDSVHISIVLADYGVLMEGAGS 453
KE +EG+ +D+VHISI L+D+GVL +G GS
Sbjct: 533 KEVGEEGYHVDAVHISIALSDHGVLPDGVGS 563
Score = 33.9 bits (76), Expect(3) = 3e-31
Identities = 13/13 (100%), Positives = 13/13 (100%)
Frame = -2
Query: 633 YYTKNGKDPLVYP 595
YYTKNGKDPLVYP
Sbjct: 503 YYTKNGKDPLVYP 515