BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00016964
         (454 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002270595.2| PREDICTED: DNA primase small subunit-like [V...    70   2e-10
emb|CBI34473.3| unnamed protein product [Vitis vinifera]               70   2e-10
ref|XP_003545171.1| PREDICTED: LOW QUALITY PROTEIN: DNA primase ...    53   2e-09
gb|EEC79056.1| hypothetical protein OsI_19620 [Oryza sativa Indi...    58   3e-09
gb|AAT38037.1| unknown protein [Oryza sativa Japonica Group] gi|...    58   3e-09

>ref|XP_002270595.2| PREDICTED: DNA primase small subunit-like [Vitis vinifera]
          Length = 457

 Score = 70.1 bits (170), Expect = 2e-10
 Identities = 41/83 (49%), Positives = 52/83 (62%)
 Frame = +2

Query: 71  RTFLEEKLLHGQNLFATEERFEKLYN*FLLYGST**KGGISTAVTAEI*AK*QKNRCSSI 250
           + F EEKLL GQ LF+TEER+EK+            K     ++T+E+  K Q+NR SSI
Sbjct: 256 KDFFEEKLLPGQKLFSTEERYEKIL-----------KIIPDESITSELRGKWQENRRSSI 304

Query: 251 SIEDLNVSRWEQLKHSLQFG*RK 319
           S ED+N  RWEQLKH LQ G +K
Sbjct: 305 SKEDINAIRWEQLKHMLQSGKQK 327


>emb|CBI34473.3| unnamed protein product [Vitis vinifera]
          Length = 447

 Score = 70.1 bits (170), Expect = 2e-10
 Identities = 41/83 (49%), Positives = 52/83 (62%)
 Frame = +2

Query: 71  RTFLEEKLLHGQNLFATEERFEKLYN*FLLYGST**KGGISTAVTAEI*AK*QKNRCSSI 250
           + F EEKLL GQ LF+TEER+EK+            K     ++T+E+  K Q+NR SSI
Sbjct: 246 KDFFEEKLLPGQKLFSTEERYEKIL-----------KIIPDESITSELRGKWQENRRSSI 294

Query: 251 SIEDLNVSRWEQLKHSLQFG*RK 319
           S ED+N  RWEQLKH LQ G +K
Sbjct: 295 SKEDINAIRWEQLKHMLQSGKQK 317


>ref|XP_003545171.1| PREDICTED: LOW QUALITY PROTEIN: DNA primase small subunit-like
           [Glycine max]
          Length = 435

 Score = 53.1 bits (126), Expect(2) = 2e-09
 Identities = 34/84 (40%), Positives = 47/84 (55%), Gaps = 1/84 (1%)
 Frame = +2

Query: 71  RTFLEEKLLHGQNLFATEERFEKLYN*FLLYGST**KGGI-STAVTAEI*AK*QKNRCSS 247
           + + E+ LL GQNL ATEER+EK+             G I   ++ +E+  + Q +R SS
Sbjct: 233 KDYFEKNLLTGQNLLATEERYEKIL------------GMIPDESIASELRGRWQDSRRSS 280

Query: 248 ISIEDLNVSRWEQLKHSLQFG*RK 319
            + ED+NV RWEQ K  LQ G  K
Sbjct: 281 SAKEDINVVRWEQCKQLLQSGKHK 304



 Score = 33.5 bits (75), Expect(2) = 2e-09
 Identities = 15/22 (68%), Positives = 17/22 (77%)
 Frame = +1

Query: 1   NSHKKVSLMVSETYPFLVRSYT 66
           NSHKKVSLM +  +PFL  SYT
Sbjct: 208 NSHKKVSLMGAALHPFLATSYT 229


>gb|EEC79056.1| hypothetical protein OsI_19620 [Oryza sativa Indica Group]
           gi|222631272|gb|EEE63404.1| hypothetical protein
           OsJ_18216 [Oryza sativa Japonica Group]
          Length = 449

 Score = 57.8 bits (138), Expect(2) = 3e-09
 Identities = 37/81 (45%), Positives = 49/81 (60%)
 Frame = +2

Query: 77  FLEEKLLHGQNLFATEERFEKLYN*FLLYGST**KGGISTAVTAEI*AK*QKNRCSSISI 256
           F E+KLL  Q LFA+EER++K+ +  L+             V +E+  K Q NR SSIS 
Sbjct: 254 FFEDKLLLSQQLFASEERYQKILD--LIPDEN---------VASELHDKWQGNRRSSISK 302

Query: 257 EDLNVSRWEQLKHSLQFG*RK 319
           ED+N +RWEQLK +LQ G  K
Sbjct: 303 EDVNATRWEQLKSTLQSGKHK 323



 Score = 28.1 bits (61), Expect(2) = 3e-09
 Identities = 13/22 (59%), Positives = 16/22 (72%)
 Frame = +1

Query: 1   NSHKKVSLMVSETYPFLVRSYT 66
           N+ KKVSL  +  +PFL RSYT
Sbjct: 227 NTMKKVSLTGAVLHPFLARSYT 248


>gb|AAT38037.1| unknown protein [Oryza sativa Japonica Group]
           gi|55167985|gb|AAV43853.1| unknown protein [Oryza sativa
           Japonica Group] gi|215707277|dbj|BAG93737.1| unnamed
           protein product [Oryza sativa Japonica Group]
          Length = 166

 Score = 57.8 bits (138), Expect(2) = 3e-09
 Identities = 37/81 (45%), Positives = 49/81 (60%)
 Frame = +2

Query: 77  FLEEKLLHGQNLFATEERFEKLYN*FLLYGST**KGGISTAVTAEI*AK*QKNRCSSISI 256
           F E+KLL  Q LFA+EER++K+ +  L+             V +E+  K Q NR SSIS 
Sbjct: 56  FFEDKLLLSQQLFASEERYQKILD--LIPDEN---------VASELHDKWQGNRRSSISK 104

Query: 257 EDLNVSRWEQLKHSLQFG*RK 319
           ED+N +RWEQLK +LQ G  K
Sbjct: 105 EDVNATRWEQLKSTLQSGKHK 125



 Score = 28.1 bits (61), Expect(2) = 3e-09
 Identities = 13/22 (59%), Positives = 16/22 (72%)
 Frame = +1

Query: 1  NSHKKVSLMVSETYPFLVRSYT 66
          N+ KKVSL  +  +PFL RSYT
Sbjct: 29 NTMKKVSLTGAVLHPFLARSYT 50