BLASTX nr result

ID: Coptis25_contig00016934 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00016934
         (848 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004135610.1| PREDICTED: uncharacterized protein LOC101205...   346   4e-93
ref|XP_004165710.1| PREDICTED: uncharacterized LOC101205785, par...   336   3e-90
ref|XP_002279467.1| PREDICTED: uncharacterized protein LOC100244...   332   5e-89
ref|XP_003520803.1| PREDICTED: uncharacterized protein LOC100775...   330   2e-88
ref|XP_003626205.1| hypothetical protein MTR_7g112650 [Medicago ...   330   2e-88

>ref|XP_004135610.1| PREDICTED: uncharacterized protein LOC101205785 [Cucumis sativus]
          Length = 327

 Score =  346 bits (887), Expect = 4e-93
 Identities = 175/277 (63%), Positives = 207/277 (74%), Gaps = 16/277 (5%)
 Frame = -2

Query: 784 MGNPSATLIELMFLISLSFSVTSFLV----HKQQP---ATPKDLLSILGTKDQASKVNSN 626
           MG PS +L +L   +SLS SVT F +    +K  P   ATP DLL++LG+K QAS VN  
Sbjct: 1   MGKPSISL-KLTIFLSLSLSVTPFALFPNYNKPPPIPKATPSDLLNLLGSKSQASSVNPG 59

Query: 625 VAHSLKACLKFLVPFSPNDD-----GRRST----VEIHSNNNNNDLIWWPPPSVMGLARL 473
           VA  LK+C KFLVPF P        GRRS      +  S    ++L+WWPP SV+ LARL
Sbjct: 60  VAKELKSCFKFLVPFHPTPSNAKLSGRRSLRSTGFDDRSWREEDELVWWPPQSVLELARL 119

Query: 472 SLDSGADPGAIQRALDPTVLPVPDVEGSKQHRCELTRTPYGRRFISQELNSYFAFLFELI 293
            +DSG DPGAI R LDP ++P+PD+ GS++H+CELTRTPYGRRFIS+ELNSY  FLFE I
Sbjct: 120 GVDSGGDPGAIHRTLDPAIIPIPDIHGSQRHKCELTRTPYGRRFISEELNSYLQFLFEFI 179

Query: 292 AARGPAVGLYVSLNRFDLFHGHLFLATDSGRVGILFHAKEYPAYEKDVFPYNMGYCQIGS 113
           AAR  A+G  + LNRFDLFHGHLFLA D+ R+GILFHAKEYPAYEK+ FP NMGYCQIGS
Sbjct: 180 AARSSAMGFNIKLNRFDLFHGHLFLAFDNNRLGILFHAKEYPAYEKETFPCNMGYCQIGS 239

Query: 112 NVAYDDMMNLRNILWLAPLPSNATKAWIAPGVLVVLD 2
           NV+YDD MNLRNILWLAP+PS++TK W APGVLVVLD
Sbjct: 240 NVSYDDSMNLRNILWLAPMPSSSTKDWEAPGVLVVLD 276


>ref|XP_004165710.1| PREDICTED: uncharacterized LOC101205785, partial [Cucumis sativus]
          Length = 318

 Score =  336 bits (862), Expect = 3e-90
 Identities = 168/264 (63%), Positives = 199/264 (75%), Gaps = 15/264 (5%)
 Frame = -2

Query: 748 FLISLSFS--VTSFLVHKQQP----ATPKDLLSILGTKDQASKVNSNVAHSLKACLKFLV 587
           F + LSFS  + SF  + + P    ATP DLL++LG+K QAS VN  VA  LK+C KFLV
Sbjct: 4   FPLPLSFSHPLCSFPNYNKPPPIPKATPSDLLNLLGSKSQASSVNPGVAKELKSCFKFLV 63

Query: 586 PFSPNDD-----GRRST----VEIHSNNNNNDLIWWPPPSVMGLARLSLDSGADPGAIQR 434
           PF P        GRRS      +  S    ++L+WWPP SV+ LARL +DSG DPGAI R
Sbjct: 64  PFHPTPSNAKLSGRRSLRSTGFDDRSWREEDELVWWPPQSVLELARLGVDSGGDPGAIHR 123

Query: 433 ALDPTVLPVPDVEGSKQHRCELTRTPYGRRFISQELNSYFAFLFELIAARGPAVGLYVSL 254
            LDP ++P+PD+ GS++H+CELTRTPYGRRFIS+ELNSY  FLFE IAAR  A+G  + L
Sbjct: 124 TLDPAIIPIPDIHGSQRHKCELTRTPYGRRFISEELNSYLQFLFEFIAARSSAMGFNIKL 183

Query: 253 NRFDLFHGHLFLATDSGRVGILFHAKEYPAYEKDVFPYNMGYCQIGSNVAYDDMMNLRNI 74
           NRFDLFHGHLFLA D+ R+GILFHAKEYPAYEK+ FP NMGYCQIGSNV+YDD MNLRNI
Sbjct: 184 NRFDLFHGHLFLAFDNNRLGILFHAKEYPAYEKETFPCNMGYCQIGSNVSYDDSMNLRNI 243

Query: 73  LWLAPLPSNATKAWIAPGVLVVLD 2
           LWLAP+PS++TK W APGVLVVLD
Sbjct: 244 LWLAPMPSSSTKDWEAPGVLVVLD 267


>ref|XP_002279467.1| PREDICTED: uncharacterized protein LOC100244341 [Vitis vinifera]
           gi|296089699|emb|CBI39518.3| unnamed protein product
           [Vitis vinifera]
          Length = 339

 Score =  332 bits (852), Expect = 5e-89
 Identities = 167/289 (57%), Positives = 207/289 (71%), Gaps = 28/289 (9%)
 Frame = -2

Query: 784 MGNPSATLIELMFLISLSFSVTS------FLVHKQQPATPK----------DLLSILGTK 653
           MG PS +L    F++SLSF+ +        L     P +P           D++++LGT+
Sbjct: 1   MGYPSLSL-RFAFVLSLSFAASHSSSSPFHLTRTAPPPSPSSFRNLKASASDVVALLGTR 59

Query: 652 DQASKVNSNVAHSLKACLKFLVPFSPNDDGR-------RSTVEIHSNNNN-----NDLIW 509
            QAS++N+  A  L++C KFLVPF+PN  G        R    +   N       ++L+W
Sbjct: 60  QQASQINAEEARQLRSCFKFLVPFTPNSIGLASGGWSIRRRFRLKKGNGRCRREEDELVW 119

Query: 508 WPPPSVMGLARLSLDSGADPGAIQRALDPTVLPVPDVEGSKQHRCELTRTPYGRRFISQE 329
           WPP  V+ LARL+ DSG DP AI R LDPT++ VPDVEGSK+ +CELTRTPYGRRFI++E
Sbjct: 120 WPPAPVLELARLAFDSGGDPAAIHRTLDPTMIRVPDVEGSKEFQCELTRTPYGRRFINEE 179

Query: 328 LNSYFAFLFELIAARGPAVGLYVSLNRFDLFHGHLFLATDSGRVGILFHAKEYPAYEKDV 149
           LNSY  FLFELIAARGP +GL  SL+R+D FHGHLFLA ++GR+GILFHAKEYP+YEK+ 
Sbjct: 180 LNSYLEFLFELIAARGPDIGLNASLSRYDFFHGHLFLARETGRLGILFHAKEYPSYEKES 239

Query: 148 FPYNMGYCQIGSNVAYDDMMNLRNILWLAPLPSNATKAWIAPGVLVVLD 2
           FPYNMGYCQIGSNVAYDD MNLRNILWLAPLPSN++K W+APGVLVVLD
Sbjct: 240 FPYNMGYCQIGSNVAYDDSMNLRNILWLAPLPSNSSKGWVAPGVLVVLD 288


>ref|XP_003520803.1| PREDICTED: uncharacterized protein LOC100775790 [Glycine max]
          Length = 330

 Score =  330 bits (846), Expect = 2e-88
 Identities = 163/254 (64%), Positives = 192/254 (75%), Gaps = 6/254 (2%)
 Frame = -2

Query: 745 LISLSFSVTSFLVHKQQPATPKDLLSILGTKDQASKVNSNVAHSLKACLKFLVPFSPNDD 566
           + S  ++ +S L+ K   ATP DLLS+LG+K Q+S VN  VA  LK+C KFLVPFSP   
Sbjct: 29  VFSKRYAPSSSLIPK---ATPSDLLSLLGSKPQSSAVNPEVARDLKSCFKFLVPFSPVHP 85

Query: 565 GRRST------VEIHSNNNNNDLIWWPPPSVMGLARLSLDSGADPGAIQRALDPTVLPVP 404
             R        +   +  + N LIWWPP  V+ LARL++DSG DP AI R LDPT++ VP
Sbjct: 86  RHRKLGLGRPKLTSPTRRDKNKLIWWPPEPVLELARLAVDSGGDPAAIHRLLDPTIIQVP 145

Query: 403 DVEGSKQHRCELTRTPYGRRFISQELNSYFAFLFELIAARGPAVGLYVSLNRFDLFHGHL 224
           D EGSK  RCELTRTPYGRRFI +ELN Y  FLFELI  RGP+VGL V+LNRFDLFHGHL
Sbjct: 146 DCEGSKDERCELTRTPYGRRFICEELNLYLQFLFELIVDRGPSVGLDVTLNRFDLFHGHL 205

Query: 223 FLATDSGRVGILFHAKEYPAYEKDVFPYNMGYCQIGSNVAYDDMMNLRNILWLAPLPSNA 44
           FLA DSGR+GILFHAKEYPAY+K VFPYNMG+CQ GSNV YDD MNLRNILWLAP+P ++
Sbjct: 206 FLALDSGRLGILFHAKEYPAYDKQVFPYNMGFCQRGSNVTYDDSMNLRNILWLAPMPGDS 265

Query: 43  TKAWIAPGVLVVLD 2
            ++W+APGVLVVLD
Sbjct: 266 GESWVAPGVLVVLD 279


>ref|XP_003626205.1| hypothetical protein MTR_7g112650 [Medicago truncatula]
           gi|355501220|gb|AES82423.1| hypothetical protein
           MTR_7g112650 [Medicago truncatula]
          Length = 340

 Score =  330 bits (846), Expect = 2e-88
 Identities = 166/283 (58%), Positives = 199/283 (70%), Gaps = 19/283 (6%)
 Frame = -2

Query: 793 LVDMGNPSATLIELMFLISLSFSVTSF-----------LVHKQQPATPKDLLSILGTKDQ 647
           L+ M  PS   + L    S++ S +SF            +     ATP DLLS+LG    
Sbjct: 7   LIPMRYPSVFGLALFLSFSVTSSSSSFPRTPFFRLPSSSIISIPKATPSDLLSLLGPTPH 66

Query: 646 ASKVNSNVAHSLKACLKFLVPFSPNDDGR--------RSTVEIHSNNNNNDLIWWPPPSV 491
           +  VN  VA  LK+CLKFLVPFSP             RS +   +  N+ND+IWWPP  V
Sbjct: 67  SKLVNPVVARQLKSCLKFLVPFSPTVTDSPPRHRKLGRSELTGSNRRNDNDMIWWPPEPV 126

Query: 490 MGLARLSLDSGADPGAIQRALDPTVLPVPDVEGSKQHRCELTRTPYGRRFISQELNSYFA 311
           + LARL++DS  DP A+ RALDPTV+PVPDVEGS + RC LTRTPYGRRFIS+ELN Y  
Sbjct: 127 LELARLAVDSSGDPAAVHRALDPTVIPVPDVEGSNEDRCHLTRTPYGRRFISEELNMYMQ 186

Query: 310 FLFELIAARGPAVGLYVSLNRFDLFHGHLFLATDSGRVGILFHAKEYPAYEKDVFPYNMG 131
           FLFELI  RGP++G  V+LNR+DLFHGHLFL+  SGR+G+LFHA+EYPAY+K VFPYNMG
Sbjct: 187 FLFELIVDRGPSIGFDVALNRYDLFHGHLFLSIHSGRLGVLFHAREYPAYDKKVFPYNMG 246

Query: 130 YCQIGSNVAYDDMMNLRNILWLAPLPSNATKAWIAPGVLVVLD 2
           +CQ GSNV YDD MNLRNILWLAPLP N+TK+W+APGVLVVLD
Sbjct: 247 FCQRGSNVTYDDSMNLRNILWLAPLPDNSTKSWVAPGVLVVLD 289


Top