BLASTX nr result

ID: Coptis25_contig00016928 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00016928
         (207 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAO41731.1| cytoplasmic ribosomal protein S14 [Brassica napus]      54   9e-16
emb|CBI30860.3| unnamed protein product [Vitis vinifera]               54   1e-15
emb|CAN63246.1| hypothetical protein VITISV_018830 [Vitis vinifera]    54   1e-15
gb|AFW75985.1| hypothetical protein ZEAMMB73_882157 [Zea mays]         54   1e-15
gb|AFW75983.1| hypothetical protein ZEAMMB73_882157 [Zea mays] g...    54   1e-15

>gb|AAO41731.1| cytoplasmic ribosomal protein S14 [Brassica napus]
          Length = 150

 Score = 54.3 bits (129), Expect(2) = 9e-16
 Identities = 25/28 (89%), Positives = 25/28 (89%)
 Frame = -3

Query: 205 RDGEYVFGVVHIFASLNDTFIHVIDLSG 122
           RDGE VFGVVHIFAS NDTFIHV DLSG
Sbjct: 21  RDGEQVFGVVHIFASFNDTFIHVTDLSG 48



 Score = 53.9 bits (128), Expect(2) = 9e-16
 Identities = 26/37 (70%), Positives = 29/37 (78%)
 Frame = -2

Query: 113 MVRIVGGINVKADGDESLPYVVVLAAQFVAARCKELG 3
           +VRI GG+ VKAD DES PY  +LAAQ VA RCKELG
Sbjct: 52  LVRITGGMKVKADRDESSPYAAMLAAQDVAQRCKELG 88


>emb|CBI30860.3| unnamed protein product [Vitis vinifera]
          Length = 689

 Score = 53.9 bits (128), Expect(2) = 1e-15
 Identities = 24/28 (85%), Positives = 25/28 (89%)
 Frame = -3

Query: 205 RDGEYVFGVVHIFASLNDTFIHVIDLSG 122
           RDGE+VFGV HIFAS NDTFIHV DLSG
Sbjct: 560 RDGEHVFGVAHIFASFNDTFIHVTDLSG 587



 Score = 53.9 bits (128), Expect(2) = 1e-15
 Identities = 26/37 (70%), Positives = 29/37 (78%)
 Frame = -2

Query: 113 MVRIVGGINVKADGDESLPYVVVLAAQFVAARCKELG 3
           +VRI GG+ VKAD DES PY  +LAAQ VA RCKELG
Sbjct: 591 LVRITGGMKVKADRDESSPYAAMLAAQDVAQRCKELG 627


>emb|CAN63246.1| hypothetical protein VITISV_018830 [Vitis vinifera]
          Length = 224

 Score = 53.9 bits (128), Expect(2) = 1e-15
 Identities = 24/28 (85%), Positives = 25/28 (89%)
 Frame = -3

Query: 205 RDGEYVFGVVHIFASLNDTFIHVIDLSG 122
           RDGE+VFGV HIFAS NDTFIHV DLSG
Sbjct: 87  RDGEHVFGVAHIFASFNDTFIHVTDLSG 114



 Score = 53.9 bits (128), Expect(2) = 1e-15
 Identities = 26/37 (70%), Positives = 29/37 (78%)
 Frame = -2

Query: 113 MVRIVGGINVKADGDESLPYVVVLAAQFVAARCKELG 3
           +VRI GG+ VKAD DES PY  +LAAQ VA RCKELG
Sbjct: 118 LVRITGGMKVKADRDESSPYAAMLAAQDVAQRCKELG 154


>gb|AFW75985.1| hypothetical protein ZEAMMB73_882157 [Zea mays]
          Length = 194

 Score = 53.9 bits (128), Expect(2) = 1e-15
 Identities = 23/28 (82%), Positives = 25/28 (89%)
 Frame = -3

Query: 205 RDGEYVFGVVHIFASLNDTFIHVIDLSG 122
           R+GEYVFGV HIFAS NDTFIH+ DLSG
Sbjct: 21  REGEYVFGVAHIFASFNDTFIHITDLSG 48



 Score = 53.9 bits (128), Expect(2) = 1e-15
 Identities = 26/37 (70%), Positives = 29/37 (78%)
 Frame = -2

Query: 113 MVRIVGGINVKADGDESLPYVVVLAAQFVAARCKELG 3
           +VRI GG+ VKAD DES PY  +LAAQ VA RCKELG
Sbjct: 52  LVRITGGMKVKADRDESSPYAAMLAAQDVAQRCKELG 88


>gb|AFW75983.1| hypothetical protein ZEAMMB73_882157 [Zea mays]
           gi|413943338|gb|AFW75987.1| hypothetical protein
           ZEAMMB73_888522 [Zea mays]
          Length = 153

 Score = 53.9 bits (128), Expect(2) = 1e-15
 Identities = 23/28 (82%), Positives = 25/28 (89%)
 Frame = -3

Query: 205 RDGEYVFGVVHIFASLNDTFIHVIDLSG 122
           R+GEYVFGV HIFAS NDTFIH+ DLSG
Sbjct: 24  REGEYVFGVAHIFASFNDTFIHITDLSG 51



 Score = 53.9 bits (128), Expect(2) = 1e-15
 Identities = 26/37 (70%), Positives = 29/37 (78%)
 Frame = -2

Query: 113 MVRIVGGINVKADGDESLPYVVVLAAQFVAARCKELG 3
           +VRI GG+ VKAD DES PY  +LAAQ VA RCKELG
Sbjct: 55  LVRITGGMKVKADRDESSPYAAMLAAQDVAQRCKELG 91


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