BLASTX nr result
ID: Coptis25_contig00016928
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis25_contig00016928 (207 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gb|AAO41731.1| cytoplasmic ribosomal protein S14 [Brassica napus] 54 9e-16 emb|CBI30860.3| unnamed protein product [Vitis vinifera] 54 1e-15 emb|CAN63246.1| hypothetical protein VITISV_018830 [Vitis vinifera] 54 1e-15 gb|AFW75985.1| hypothetical protein ZEAMMB73_882157 [Zea mays] 54 1e-15 gb|AFW75983.1| hypothetical protein ZEAMMB73_882157 [Zea mays] g... 54 1e-15 >gb|AAO41731.1| cytoplasmic ribosomal protein S14 [Brassica napus] Length = 150 Score = 54.3 bits (129), Expect(2) = 9e-16 Identities = 25/28 (89%), Positives = 25/28 (89%) Frame = -3 Query: 205 RDGEYVFGVVHIFASLNDTFIHVIDLSG 122 RDGE VFGVVHIFAS NDTFIHV DLSG Sbjct: 21 RDGEQVFGVVHIFASFNDTFIHVTDLSG 48 Score = 53.9 bits (128), Expect(2) = 9e-16 Identities = 26/37 (70%), Positives = 29/37 (78%) Frame = -2 Query: 113 MVRIVGGINVKADGDESLPYVVVLAAQFVAARCKELG 3 +VRI GG+ VKAD DES PY +LAAQ VA RCKELG Sbjct: 52 LVRITGGMKVKADRDESSPYAAMLAAQDVAQRCKELG 88 >emb|CBI30860.3| unnamed protein product [Vitis vinifera] Length = 689 Score = 53.9 bits (128), Expect(2) = 1e-15 Identities = 24/28 (85%), Positives = 25/28 (89%) Frame = -3 Query: 205 RDGEYVFGVVHIFASLNDTFIHVIDLSG 122 RDGE+VFGV HIFAS NDTFIHV DLSG Sbjct: 560 RDGEHVFGVAHIFASFNDTFIHVTDLSG 587 Score = 53.9 bits (128), Expect(2) = 1e-15 Identities = 26/37 (70%), Positives = 29/37 (78%) Frame = -2 Query: 113 MVRIVGGINVKADGDESLPYVVVLAAQFVAARCKELG 3 +VRI GG+ VKAD DES PY +LAAQ VA RCKELG Sbjct: 591 LVRITGGMKVKADRDESSPYAAMLAAQDVAQRCKELG 627 >emb|CAN63246.1| hypothetical protein VITISV_018830 [Vitis vinifera] Length = 224 Score = 53.9 bits (128), Expect(2) = 1e-15 Identities = 24/28 (85%), Positives = 25/28 (89%) Frame = -3 Query: 205 RDGEYVFGVVHIFASLNDTFIHVIDLSG 122 RDGE+VFGV HIFAS NDTFIHV DLSG Sbjct: 87 RDGEHVFGVAHIFASFNDTFIHVTDLSG 114 Score = 53.9 bits (128), Expect(2) = 1e-15 Identities = 26/37 (70%), Positives = 29/37 (78%) Frame = -2 Query: 113 MVRIVGGINVKADGDESLPYVVVLAAQFVAARCKELG 3 +VRI GG+ VKAD DES PY +LAAQ VA RCKELG Sbjct: 118 LVRITGGMKVKADRDESSPYAAMLAAQDVAQRCKELG 154 >gb|AFW75985.1| hypothetical protein ZEAMMB73_882157 [Zea mays] Length = 194 Score = 53.9 bits (128), Expect(2) = 1e-15 Identities = 23/28 (82%), Positives = 25/28 (89%) Frame = -3 Query: 205 RDGEYVFGVVHIFASLNDTFIHVIDLSG 122 R+GEYVFGV HIFAS NDTFIH+ DLSG Sbjct: 21 REGEYVFGVAHIFASFNDTFIHITDLSG 48 Score = 53.9 bits (128), Expect(2) = 1e-15 Identities = 26/37 (70%), Positives = 29/37 (78%) Frame = -2 Query: 113 MVRIVGGINVKADGDESLPYVVVLAAQFVAARCKELG 3 +VRI GG+ VKAD DES PY +LAAQ VA RCKELG Sbjct: 52 LVRITGGMKVKADRDESSPYAAMLAAQDVAQRCKELG 88 >gb|AFW75983.1| hypothetical protein ZEAMMB73_882157 [Zea mays] gi|413943338|gb|AFW75987.1| hypothetical protein ZEAMMB73_888522 [Zea mays] Length = 153 Score = 53.9 bits (128), Expect(2) = 1e-15 Identities = 23/28 (82%), Positives = 25/28 (89%) Frame = -3 Query: 205 RDGEYVFGVVHIFASLNDTFIHVIDLSG 122 R+GEYVFGV HIFAS NDTFIH+ DLSG Sbjct: 24 REGEYVFGVAHIFASFNDTFIHITDLSG 51 Score = 53.9 bits (128), Expect(2) = 1e-15 Identities = 26/37 (70%), Positives = 29/37 (78%) Frame = -2 Query: 113 MVRIVGGINVKADGDESLPYVVVLAAQFVAARCKELG 3 +VRI GG+ VKAD DES PY +LAAQ VA RCKELG Sbjct: 55 LVRITGGMKVKADRDESSPYAAMLAAQDVAQRCKELG 91