BLASTX nr result

ID: Coptis25_contig00016926 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00016926
         (485 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN65091.1| hypothetical protein VITISV_035036 [Vitis vinifera]   129   3e-28
ref|XP_003632121.1| PREDICTED: uncharacterized protein LOC100853...   110   2e-22
emb|CBI15810.3| unnamed protein product [Vitis vinifera]               93   7e-20
ref|XP_002523948.1| conserved hypothetical protein [Ricinus comm...    94   1e-17
gb|EEE53933.1| hypothetical protein OsJ_00517 [Oryza sativa Japo...    82   3e-14

>emb|CAN65091.1| hypothetical protein VITISV_035036 [Vitis vinifera]
          Length = 795

 Score =  129 bits (323), Expect = 3e-28
 Identities = 78/146 (53%), Positives = 95/146 (65%), Gaps = 4/146 (2%)
 Frame = +1

Query: 31  PVKIPSSR-KHPYNRTSDKLDNQNMDTENELCVLDLLGDDGPNENSEGSPVHEAHVAFSV 207
           P K  + R  + +N   DK DN    TE++L V DLLGDDGP  N EGSPV EAHVAFSV
Sbjct: 135 PPKSDADRHNNAFNGKGDKPDNWKTATEHQLSVFDLLGDDGPYGNLEGSPVCEAHVAFSV 194

Query: 208 EGLGKMEMGTPVHSPRQPGRV--FDGFLPPKPVRRYQSSKNLHYV-NDFEFEVNAMIHDI 378
           EGLGK+   TPVHSP QP RV  +D  L  K  R+ +SSKNL++V +D E EV + + DI
Sbjct: 195 EGLGKVGTETPVHSPHQPHRVSSYDCSL-LKDARQLRSSKNLNFVLDDLEVEVGSKMQDI 253

Query: 379 DMPPCGNHLELPINLKGIKDHSSHSK 456
           +M P GN LELP    GI+D  S+ K
Sbjct: 254 NMSPSGNSLELPFYPMGIEDPFSNPK 279


>ref|XP_003632121.1| PREDICTED: uncharacterized protein LOC100853672 [Vitis vinifera]
          Length = 828

 Score =  110 bits (274), Expect = 2e-22
 Identities = 68/145 (46%), Positives = 84/145 (57%), Gaps = 3/145 (2%)
 Frame = +1

Query: 31  PVKIPSSR-KHPYNRTSDKLDNQNMDTENELCVLDLLGDDGPNENSEGSPVHEAHVAFSV 207
           P K  + R  + +N   DK DN    TE++L V DLLGDDGP  N EGSPV EAHVAFSV
Sbjct: 131 PPKSDADRHNNAFNGKGDKPDNWKTATEHQLSVFDLLGDDGPYGNLEGSPVCEAHVAFSV 190

Query: 208 EGLGKMEMGTPVHSPRQPGRVFDGFLPPKPVRRYQSSKNLHYVNDFEFE--VNAMIHDID 381
           EGLGK+   TPVHSP QP R+   F  P+ +    ++  L     F F     + + DI+
Sbjct: 191 EGLGKVGTETPVHSPHQPHRMQGNFALPRILILCWTTLKLKCYAFFLFGSLQGSKMQDIN 250

Query: 382 MPPCGNHLELPINLKGIKDHSSHSK 456
           M P GN LELP    GI+D  S+ K
Sbjct: 251 MSPSGNSLELPFYPMGIEDPFSNPK 275


>emb|CBI15810.3| unnamed protein product [Vitis vinifera]
          Length = 252

 Score = 92.8 bits (229), Expect(2) = 7e-20
 Identities = 50/89 (56%), Positives = 58/89 (65%), Gaps = 1/89 (1%)
 Frame = +1

Query: 31  PVKIPSSR-KHPYNRTSDKLDNQNMDTENELCVLDLLGDDGPNENSEGSPVHEAHVAFSV 207
           P K  + R  + +N   DK DN    TE++L V DLLGDDGP  N EGSPV EAHVAFSV
Sbjct: 127 PPKSDADRHNNAFNGKGDKPDNWKTATEHQLSVFDLLGDDGPYGNLEGSPVCEAHVAFSV 186

Query: 208 EGLGKMEMGTPVHSPRQPGRVFDGFLPPK 294
           EGLGK+   TPVHSP QP R+   F  P+
Sbjct: 187 EGLGKVGTETPVHSPHQPHRMQGNFALPR 215



 Score = 29.3 bits (64), Expect(2) = 7e-20
 Identities = 11/14 (78%), Positives = 13/14 (92%)
 Frame = +2

Query: 380 ICHHVAIIWNYLST 421
           ICH VAI+W+YLST
Sbjct: 236 ICHLVAILWSYLST 249


>ref|XP_002523948.1| conserved hypothetical protein [Ricinus communis]
           gi|223536795|gb|EEF38435.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 364

 Score = 93.6 bits (231), Expect = 1e-17
 Identities = 59/163 (36%), Positives = 85/163 (52%), Gaps = 15/163 (9%)
 Frame = +1

Query: 28  SPVKIPSSRKHPYNRTSDKLDNQ-NMDTENELCVLDLLGDDGPNENSEGSPVHEAHVAFS 204
           SP K        ++ +   +DN+ ++    ++   DLLGDD  N   E  P +EAHVAFS
Sbjct: 34  SPKKTLLDSLDTHSNSLHGVDNKPDLWNTTKVSFFDLLGDDESNGYVEAGPTYEAHVAFS 93

Query: 205 VEGLGKMEMGTPVHSPRQPGRV--FDGFLPPKPVRRYQSSKNL-HYVNDFEFEVNAMIHD 375
           V+GLGK+E  TP  SP+QP R   +  F P K  R+  SS+N  H +ND E EV+A++ D
Sbjct: 94  VDGLGKVEAETPPQSPQQPDRYVSYGCFSPLKAARQLNSSRNCDHVLNDLELEVDAIMQD 153

Query: 376 IDMPPCGNHLE-----------LPINLKGIKDHSSHSKHERLI 471
           ++MP  G+ L+           L  N   ++DH     H   I
Sbjct: 154 LEMPLSGSSLDFSTGTNDSYDKLEANFPAVRDHMQLDGHNSKI 196


>gb|EEE53933.1| hypothetical protein OsJ_00517 [Oryza sativa Japonica Group]
          Length = 917

 Score = 82.4 bits (202), Expect = 3e-14
 Identities = 49/123 (39%), Positives = 73/123 (59%), Gaps = 2/123 (1%)
 Frame = +1

Query: 22  SNSPVKIPSSRKHPYNRTSD-KLDNQNMDTENELCVLDLLGDDGPNENSEGSPVHEAHVA 198
           S +P K P   K P  +++  K  N N++  NE+ + DL+ D+GPN  S   P  EAHV+
Sbjct: 115 SANPYKEPLGCKIPPPKSNSVKKQNPNVELNNEISLFDLVSDEGPNNKSTARPAREAHVS 174

Query: 199 FSVEGLGKMEMGTPVHSPRQPGRVFDGFLPPKPVRRYQSSKNLHYVN-DFEFEVNAMIHD 375
           FSV+GLG ++M TP  SPR   R     LPPK V RY  +K   Y+  D   +++++I+D
Sbjct: 175 FSVKGLGHVKMETPPQSPRSTKRTLP--LPPK-VMRYTQNKARRYIPFDATKQLDSIIND 231

Query: 376 IDM 384
           I++
Sbjct: 232 INV 234


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