BLASTX nr result

ID: Coptis25_contig00016912 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00016912
         (287 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003577781.1| PREDICTED: superkiller viralicidic activity ...    46   9e-09
dbj|BAJ95278.1| predicted protein [Hordeum vulgare subsp. vulgare]     46   3e-08
ref|XP_001762999.1| predicted protein [Physcomitrella patens sub...    45   1e-06
ref|XP_002963518.1| hypothetical protein SELMODRAFT_79650 [Selag...    40   8e-06

>ref|XP_003577781.1| PREDICTED: superkiller viralicidic activity 2-like 2-like
           [Brachypodium distachyon]
          Length = 1005

 Score = 46.2 bits (108), Expect(2) = 9e-09
 Identities = 23/39 (58%), Positives = 27/39 (69%), Gaps = 2/39 (5%)
 Frame = +2

Query: 8   VKGSCSCLIDTGDELLVTELMFNGEL--LSHDSTFSFVA 118
           +KG  +CLIDTGDELL+TELMFNG    L H    S V+
Sbjct: 834 LKGRAACLIDTGDELLITELMFNGTFNDLDHHQVASVVS 872



 Score = 38.1 bits (87), Expect(2) = 9e-09
 Identities = 14/25 (56%), Positives = 22/25 (88%)
 Frame = +1

Query: 211 SCFIPRDRSNDKIHLRTELAKPLLQ 285
           SCF+P ++SN++I LR EL+KP++Q
Sbjct: 872 SCFVPCEKSNEQIRLRNELSKPMMQ 896


>dbj|BAJ95278.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 1004

 Score = 46.2 bits (108), Expect(2) = 3e-08
 Identities = 23/39 (58%), Positives = 27/39 (69%), Gaps = 2/39 (5%)
 Frame = +2

Query: 8   VKGSCSCLIDTGDELLVTELMFNGEL--LSHDSTFSFVA 118
           +KG  +CLIDTGDELL+TELMFNG    L H    S V+
Sbjct: 833 LKGRAACLIDTGDELLITELMFNGTFNDLDHHQVASVVS 871



 Score = 36.2 bits (82), Expect(2) = 3e-08
 Identities = 13/25 (52%), Positives = 22/25 (88%)
 Frame = +1

Query: 211 SCFIPRDRSNDKIHLRTELAKPLLQ 285
           SCF+P ++S+++I LR EL+KP++Q
Sbjct: 871 SCFVPCEKSSEQIRLRNELSKPMIQ 895


>ref|XP_001762999.1| predicted protein [Physcomitrella patens subsp. patens]
           gi|162685811|gb|EDQ72204.1| predicted protein
           [Physcomitrella patens subsp. patens]
          Length = 1016

 Score = 45.1 bits (105), Expect(2) = 1e-06
 Identities = 25/41 (60%), Positives = 28/41 (68%)
 Frame = +2

Query: 11  KGSCSCLIDTGDELLVTELMFNGELLSHDSTFSFVAISSFF 133
           KG  +CLIDT DELLVTELMFNG L +       VAI+S F
Sbjct: 847 KGRAACLIDTADELLVTELMFNG-LFNDIDHHQVVAIASCF 886



 Score = 32.0 bits (71), Expect(2) = 1e-06
 Identities = 12/23 (52%), Positives = 18/23 (78%)
 Frame = +1

Query: 211 SCFIPRDRSNDKIHLRTELAKPL 279
           SCF+P ++SN+++ L  ELA PL
Sbjct: 884 SCFLPVEKSNEQVRLTNELAHPL 906


>ref|XP_002963518.1| hypothetical protein SELMODRAFT_79650 [Selaginella moellendorffii]
           gi|302799609|ref|XP_002981563.1| hypothetical protein
           SELMODRAFT_268485 [Selaginella moellendorffii]
           gi|300150729|gb|EFJ17378.1| hypothetical protein
           SELMODRAFT_268485 [Selaginella moellendorffii]
           gi|300168786|gb|EFJ35389.1| hypothetical protein
           SELMODRAFT_79650 [Selaginella moellendorffii]
          Length = 970

 Score = 40.0 bits (92), Expect(2) = 8e-06
 Identities = 22/42 (52%), Positives = 27/42 (64%)
 Frame = +2

Query: 8   VKGSCSCLIDTGDELLVTELMFNGELLSHDSTFSFVAISSFF 133
           +KG  +CLIDT DELLV EL+F G L +       VA+SS F
Sbjct: 800 LKGRAACLIDTADELLVAELIFEG-LFNDLDHHQIVALSSCF 840



 Score = 34.3 bits (77), Expect(2) = 8e-06
 Identities = 13/22 (59%), Positives = 19/22 (86%)
 Frame = +1

Query: 211 SCFIPRDRSNDKIHLRTELAKP 276
           SCF+P ++SN++IHL+ ELA P
Sbjct: 838 SCFLPIEKSNEQIHLKAELAWP 859


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