BLASTX nr result

ID: Coptis25_contig00016906 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00016906
         (708 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002271699.2| PREDICTED: LOW QUALITY PROTEIN: protein argo...   395   e-108
emb|CBI17106.3| unnamed protein product [Vitis vinifera]              395   e-108
ref|XP_002298162.1| argonaute protein group [Populus trichocarpa...   382   e-104
dbj|BAK05938.1| predicted protein [Hordeum vulgare subsp. vulgare]    378   e-103
ref|XP_003559290.1| PREDICTED: protein argonaute MEL1-like [Brac...   376   e-102

>ref|XP_002271699.2| PREDICTED: LOW QUALITY PROTEIN: protein argonaute 5-like [Vitis
            vinifera]
          Length = 1038

 Score =  395 bits (1016), Expect = e-108
 Identities = 186/237 (78%), Positives = 214/237 (90%), Gaps = 2/237 (0%)
 Frame = +2

Query: 2    GLVSAQHHRQELIQDLYSLVEDPQKGVSHAGMIRELLISFRKSTGFKPHRIIFYRDGVSE 181
            GLVSAQHHR+E+IQDLY    DP KGV+H GMIRELLI+FR+STG+KP RIIFYRDGVSE
Sbjct: 793  GLVSAQHHREEIIQDLYKTTADPHKGVTHGGMIRELLIAFRRSTGYKPSRIIFYRDGVSE 852

Query: 182  GQFSQVLLNELDAIRKACASLEEGYLPPVTFVVVQKRHHTRLFPADHGNKNMTDRSGNIL 361
            GQFSQVLL+E+D+IRKACASLEEGYLPPVTFVVVQKRHHTR FP+DH ++++TDRSGNIL
Sbjct: 853  GQFSQVLLHEMDSIRKACASLEEGYLPPVTFVVVQKRHHTRFFPSDHRSRDLTDRSGNIL 912

Query: 362  PGTVVDSIICHPSEFDFYLCSHAGIQGTSRPTHYHVLWDENNFNSDTMQMLTNNLCYTYA 541
            PGTVVD+ ICHP+EFDFYL SHAGIQGTSRPTHYHVL+DEN F +D +Q+LTNNLCYTYA
Sbjct: 913  PGTVVDTKICHPTEFDFYLNSHAGIQGTSRPTHYHVLYDENKFTADILQILTNNLCYTYA 972

Query: 542  RCTRSVSVVPPAYYAHLAAFRARYYIEGDVSDSGTGAS--ATRGQRAEIRSLPKIKD 706
            RCTRSVS+VPPAYYAHLAAFRARYYIEGD SDSG+G+   +TR +  E+R LP +K+
Sbjct: 973  RCTRSVSIVPPAYYAHLAAFRARYYIEGDTSDSGSGSGDRSTRERNLEVRLLPAVKE 1029


>emb|CBI17106.3| unnamed protein product [Vitis vinifera]
          Length = 1032

 Score =  395 bits (1016), Expect = e-108
 Identities = 186/237 (78%), Positives = 214/237 (90%), Gaps = 2/237 (0%)
 Frame = +2

Query: 2    GLVSAQHHRQELIQDLYSLVEDPQKGVSHAGMIRELLISFRKSTGFKPHRIIFYRDGVSE 181
            GLVSAQHHR+E+IQDLY    DP KGV+H GMIRELLI+FR+STG+KP RIIFYRDGVSE
Sbjct: 787  GLVSAQHHREEIIQDLYKTTADPHKGVTHGGMIRELLIAFRRSTGYKPSRIIFYRDGVSE 846

Query: 182  GQFSQVLLNELDAIRKACASLEEGYLPPVTFVVVQKRHHTRLFPADHGNKNMTDRSGNIL 361
            GQFSQVLL+E+D+IRKACASLEEGYLPPVTFVVVQKRHHTR FP+DH ++++TDRSGNIL
Sbjct: 847  GQFSQVLLHEMDSIRKACASLEEGYLPPVTFVVVQKRHHTRFFPSDHRSRDLTDRSGNIL 906

Query: 362  PGTVVDSIICHPSEFDFYLCSHAGIQGTSRPTHYHVLWDENNFNSDTMQMLTNNLCYTYA 541
            PGTVVD+ ICHP+EFDFYL SHAGIQGTSRPTHYHVL+DEN F +D +Q+LTNNLCYTYA
Sbjct: 907  PGTVVDTKICHPTEFDFYLNSHAGIQGTSRPTHYHVLYDENKFTADILQILTNNLCYTYA 966

Query: 542  RCTRSVSVVPPAYYAHLAAFRARYYIEGDVSDSGTGAS--ATRGQRAEIRSLPKIKD 706
            RCTRSVS+VPPAYYAHLAAFRARYYIEGD SDSG+G+   +TR +  E+R LP +K+
Sbjct: 967  RCTRSVSIVPPAYYAHLAAFRARYYIEGDTSDSGSGSGDRSTRERNLEVRLLPAVKE 1023


>ref|XP_002298162.1| argonaute protein group [Populus trichocarpa]
            gi|222845420|gb|EEE82967.1| argonaute protein group
            [Populus trichocarpa]
          Length = 904

 Score =  382 bits (982), Expect = e-104
 Identities = 184/236 (77%), Positives = 209/236 (88%), Gaps = 1/236 (0%)
 Frame = +2

Query: 2    GLVSAQHHRQELIQDLYSLVEDPQKGVSHAGMIRELLISFRKSTGFKPHRIIFYRDGVSE 181
            GLVSAQ HR+E+IQDLY   +DPQKG+ H+GMIREL I+FR+STG KPHRIIFYRDGVSE
Sbjct: 663  GLVSAQAHREEIIQDLYKKYQDPQKGLVHSGMIRELFIAFRRSTGQKPHRIIFYRDGVSE 722

Query: 182  GQFSQVLLNELDAIRKACASLEEGYLPPVTFVVVQKRHHTRLFPADHGNKNMTDRSGNIL 361
            GQFSQVLL+E+ AIR+AC +LEEGY PPVTFVVVQKRHHTR FPADH  +++TDRSGNIL
Sbjct: 723  GQFSQVLLHEMQAIREACGTLEEGYCPPVTFVVVQKRHHTRFFPADHSKRDLTDRSGNIL 782

Query: 362  PGTVVDSIICHPSEFDFYLCSHAGIQGTSRPTHYHVLWDENNFNSDTMQMLTNNLCYTYA 541
            PGTVVD+ ICHP+EFDFYL SHAGIQGTSRPTHYHVL+DENNF +D +Q LTNNLCYTYA
Sbjct: 783  PGTVVDTKICHPTEFDFYLNSHAGIQGTSRPTHYHVLFDENNFTADGLQTLTNNLCYTYA 842

Query: 542  RCTRSVSVVPPAYYAHLAAFRARYYIEGDVSDSG-TGASATRGQRAEIRSLPKIKD 706
            RCTRSVS+VPPAYYAHLAAFRARYYIEG+ SDSG TGA+   G+  E RSLP +K+
Sbjct: 843  RCTRSVSIVPPAYYAHLAAFRARYYIEGETSDSGSTGAT---GRSVEARSLPVVKE 895


>dbj|BAK05938.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 1039

 Score =  378 bits (971), Expect = e-103
 Identities = 180/241 (74%), Positives = 208/241 (86%), Gaps = 6/241 (2%)
 Frame = +2

Query: 2    GLVSAQHHRQELIQDLYSLVEDPQKGVSHAGMIRELLISFRKSTGFKPHRIIFYRDGVSE 181
            GLVSAQ HRQE+I+DL+S+ +DPQ+G  + GMIRELLI+FR+ TG +P RI+FYRDGVSE
Sbjct: 790  GLVSAQPHRQEIIEDLFSVTKDPQRGDVNGGMIRELLIAFRRKTGRRPERILFYRDGVSE 849

Query: 182  GQFSQVLLNELDAIRKACASLEEGYLPPVTFVVVQKRHHTRLFPADHGNKNMTDRSGNIL 361
            GQFS VLL+E+DAIRKACASLEEGY+PPVTFVVVQKRHHTRLFP  HG + MTD+SGNIL
Sbjct: 850  GQFSHVLLHEMDAIRKACASLEEGYMPPVTFVVVQKRHHTRLFPEVHGRREMTDKSGNIL 909

Query: 362  PGTVVDSIICHPSEFDFYLCSHAGIQGTSRPTHYHVLWDENNFNSDTMQMLTNNLCYTYA 541
            PGTVVD +ICHP+EFDFYLCSHAGIQGTSRPTHYHVL+DEN+F +D +Q LTNNLCYTYA
Sbjct: 910  PGTVVDLMICHPTEFDFYLCSHAGIQGTSRPTHYHVLYDENHFTADALQSLTNNLCYTYA 969

Query: 542  RCTRSVSVVPPAYYAHLAAFRARYYIEGDVSDSGT------GASATRGQRAEIRSLPKIK 703
            RCTR+VSVVPPAYYAHLAAFRARYY+EGD SD G+       A+  R    E+R LPKIK
Sbjct: 970  RCTRAVSVVPPAYYAHLAAFRARYYVEGDSSDGGSTPGSSGQAAIARDGPVEVRQLPKIK 1029

Query: 704  D 706
            +
Sbjct: 1030 E 1030


>ref|XP_003559290.1| PREDICTED: protein argonaute MEL1-like [Brachypodium distachyon]
          Length = 1055

 Score =  376 bits (965), Expect = e-102
 Identities = 180/242 (74%), Positives = 210/242 (86%), Gaps = 7/242 (2%)
 Frame = +2

Query: 2    GLVSAQHHRQELIQDLYSLVEDPQKGVS-HAGMIRELLISFRKSTGFKPHRIIFYRDGVS 178
            GLVSAQ HRQE+I+DL+S+++DPQ+G++ + GMIRELLI+FR+ TG +P RIIFYRDGVS
Sbjct: 805  GLVSAQPHRQEIIEDLFSVIKDPQRGITVNGGMIRELLIAFRRRTGRRPERIIFYRDGVS 864

Query: 179  EGQFSQVLLNELDAIRKACASLEEGYLPPVTFVVVQKRHHTRLFPADHGNKNMTDRSGNI 358
            EGQFS VLL+E+DAIRKACASLEEGYLPPVTFVVVQKRHHTRLFP  HG + MTD+SGNI
Sbjct: 865  EGQFSHVLLHEMDAIRKACASLEEGYLPPVTFVVVQKRHHTRLFPEVHGRREMTDKSGNI 924

Query: 359  LPGTVVDSIICHPSEFDFYLCSHAGIQGTSRPTHYHVLWDENNFNSDTMQMLTNNLCYTY 538
            LPGTVVD +ICHP+EFDFYLCSHAGIQGTSRPTHYHVL+DEN+F +D +Q LTNNLCYTY
Sbjct: 925  LPGTVVDLMICHPTEFDFYLCSHAGIQGTSRPTHYHVLYDENHFTADALQSLTNNLCYTY 984

Query: 539  ARCTRSVSVVPPAYYAHLAAFRARYYIEGDVSDSGT------GASATRGQRAEIRSLPKI 700
            ARCTR+VSVVPPAYYAHLAAFRARYY+EG+ SD G+       A+  R    E+R LP I
Sbjct: 985  ARCTRAVSVVPPAYYAHLAAFRARYYVEGESSDGGSTPGSSGQAAVAREGPVEVRQLPNI 1044

Query: 701  KD 706
            K+
Sbjct: 1045 KE 1046


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