BLASTX nr result

ID: Coptis25_contig00016905 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00016905
         (747 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002329053.1| predicted protein [Populus trichocarpa] gi|2...    78   2e-12
ref|XP_003546664.1| PREDICTED: uncharacterized protein LOC100804...    74   2e-11
ref|XP_003543602.1| PREDICTED: LOW QUALITY PROTEIN: inactive pro...    74   2e-11
ref|XP_002527420.1| ATP binding protein, putative [Ricinus commu...    74   4e-11
ref|XP_003597625.1| Somatic embryogenesis receptor kinase [Medic...    73   6e-11

>ref|XP_002329053.1| predicted protein [Populus trichocarpa] gi|222839724|gb|EEE78047.1|
           predicted protein [Populus trichocarpa]
          Length = 694

 Score = 78.2 bits (191), Expect = 2e-12
 Identities = 44/87 (50%), Positives = 48/87 (55%)
 Frame = -1

Query: 261 GTN*PQNIDITGSCSQMMLQLHDVYDPNKVRGLVTLNVYVCRCAYLATNSFPNGTVHQIN 82
           G    Q  DIT SCSQM+LQLHDVYDPNK                             IN
Sbjct: 81  GATSDQRCDITDSCSQMILQLHDVYDPNK-----------------------------IN 111

Query: 81  IKIEIVSGTPCGAVDVEAKLAQANWVV 1
           +KI+IVSG+PCGAV  EAK AQANWVV
Sbjct: 112 VKIKIVSGSPCGAVSAEAKKAQANWVV 138


>ref|XP_003546664.1| PREDICTED: uncharacterized protein LOC100804766 [Glycine max]
          Length = 699

 Score = 74.3 bits (181), Expect = 2e-11
 Identities = 41/79 (51%), Positives = 46/79 (58%)
 Frame = -1

Query: 237 DITGSCSQMMLQLHDVYDPNKVRGLVTLNVYVCRCAYLATNSFPNGTVHQINIKIEIVSG 58
           DIT SCSQM+LQLHDVYDPNK                             IN+KI+IVSG
Sbjct: 94  DITDSCSQMILQLHDVYDPNK-----------------------------INVKIKIVSG 124

Query: 57  TPCGAVDVEAKLAQANWVV 1
           +PCGAV  EAK +QANWVV
Sbjct: 125 SPCGAVAAEAKKSQANWVV 143


>ref|XP_003543602.1| PREDICTED: LOW QUALITY PROTEIN: inactive protein kinase
           SELMODRAFT_444075-like [Glycine max]
          Length = 698

 Score = 74.3 bits (181), Expect = 2e-11
 Identities = 41/79 (51%), Positives = 46/79 (58%)
 Frame = -1

Query: 237 DITGSCSQMMLQLHDVYDPNKVRGLVTLNVYVCRCAYLATNSFPNGTVHQINIKIEIVSG 58
           DIT SCSQM+LQLHDVYDPNK                             IN+KI+IVSG
Sbjct: 95  DITDSCSQMILQLHDVYDPNK-----------------------------INVKIKIVSG 125

Query: 57  TPCGAVDVEAKLAQANWVV 1
           +PCGAV  EAK +QANWVV
Sbjct: 126 SPCGAVAAEAKKSQANWVV 144


>ref|XP_002527420.1| ATP binding protein, putative [Ricinus communis]
           gi|223533230|gb|EEF34986.1| ATP binding protein,
           putative [Ricinus communis]
          Length = 754

 Score = 73.6 bits (179), Expect = 4e-11
 Identities = 42/87 (48%), Positives = 47/87 (54%)
 Frame = -1

Query: 261 GTN*PQNIDITGSCSQMMLQLHDVYDPNKVRGLVTLNVYVCRCAYLATNSFPNGTVHQIN 82
           G    Q  DIT SCSQM+LQLHDVYDPNK                             IN
Sbjct: 86  GATSEQRCDITDSCSQMILQLHDVYDPNK-----------------------------IN 116

Query: 81  IKIEIVSGTPCGAVDVEAKLAQANWVV 1
           +KI+IVSG+PCG+V  EAK A ANWVV
Sbjct: 117 VKIKIVSGSPCGSVAAEAKRALANWVV 143


>ref|XP_003597625.1| Somatic embryogenesis receptor kinase [Medicago truncatula]
           gi|358344697|ref|XP_003636424.1| Somatic embryogenesis
           receptor kinase [Medicago truncatula]
           gi|355486673|gb|AES67876.1| Somatic embryogenesis
           receptor kinase [Medicago truncatula]
           gi|355502359|gb|AES83562.1| Somatic embryogenesis
           receptor kinase [Medicago truncatula]
          Length = 695

 Score = 73.2 bits (178), Expect = 6e-11
 Identities = 42/88 (47%), Positives = 48/88 (54%)
 Frame = -1

Query: 264 LGTN*PQNIDITGSCSQMMLQLHDVYDPNKVRGLVTLNVYVCRCAYLATNSFPNGTVHQI 85
           LG +     DIT SCSQM+LQLHDVYDP K                             I
Sbjct: 85  LGASSEHKNDITDSCSQMILQLHDVYDPKK-----------------------------I 115

Query: 84  NIKIEIVSGTPCGAVDVEAKLAQANWVV 1
           N++I+IVSG+PCGAV  EAK AQANWVV
Sbjct: 116 NVRIKIVSGSPCGAVAAEAKKAQANWVV 143


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