BLASTX nr result

ID: Coptis25_contig00016890 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00016890
         (467 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002267624.1| PREDICTED: ATPase family gene 2 protein-like...   149   2e-34
ref|XP_004151742.1| PREDICTED: probable mitochondrial chaperone ...   144   6e-33
ref|XP_002512196.1| ATP binding protein, putative [Ricinus commu...   139   2e-31
ref|XP_003546854.1| PREDICTED: uncharacterized protein LOC100820...   127   9e-28
emb|CBI32158.3| unnamed protein product [Vitis vinifera]              121   7e-26

>ref|XP_002267624.1| PREDICTED: ATPase family gene 2 protein-like [Vitis vinifera]
          Length = 516

 Score =  149 bits (377), Expect = 2e-34
 Identities = 81/147 (55%), Positives = 105/147 (71%), Gaps = 21/147 (14%)
 Frame = -1

Query: 467 LGACGIHAFKSLVMNYLGLDSHKLFDVVESYIRSGGALTPAEIGEILLRNRNDADVAIQG 288
           LG CGIHAFK+L  NYLGL+SH LFDVVES IRSGG LTPA++GEILLRNR DA+VAI+ 
Sbjct: 368 LGTCGIHAFKALAANYLGLESHPLFDVVESCIRSGGTLTPAQVGEILLRNRRDAEVAIKA 427

Query: 287 VVTALK-----GGRDAVESDDMVNVPDVIDSMLLNSPENSDSSS-GKFVGKR-------- 150
           V++A++       R+ +E ++M   P+ ++  L+ SPEN ++SS GK+V K+        
Sbjct: 428 VISAMQARILGAEREPIEYEEMAKSPESVERGLMESPENWETSSPGKYVRKKRKEGGSVT 487

Query: 149 -------KKIKFLVRLKSLTKSDSGRR 90
                  KK+KFLVRL+SLTKSDSGRR
Sbjct: 488 GSGSSWEKKVKFLVRLRSLTKSDSGRR 514


>ref|XP_004151742.1| PREDICTED: probable mitochondrial chaperone BCS1-A-like [Cucumis
           sativus] gi|449531295|ref|XP_004172622.1| PREDICTED:
           probable mitochondrial chaperone BCS1-A-like [Cucumis
           sativus]
          Length = 503

 Score =  144 bits (364), Expect = 6e-33
 Identities = 84/144 (58%), Positives = 104/144 (72%), Gaps = 16/144 (11%)
 Frame = -1

Query: 467 LGACGIHAFKSLVMNYLGLDSHKLFDVVESYIRSGGALTPAEIGEILLRNRNDADVAIQG 288
           LG CG  AF++LV NYL ++SH LFDVV+S IRSGG LTPA+IGEILLRNR DADVA++ 
Sbjct: 362 LGTCGPAAFRTLVKNYLEIESHALFDVVDSCIRSGGGLTPAQIGEILLRNRRDADVAMRE 421

Query: 287 VVTALK-------GGRDAVESDDMV-NVPDVIDSMLLNSPENSDSSSGKFVGKR------ 150
           VV AL+       GGR A E +++V   P+ +  +++ SPEN DSS GK+VGKR      
Sbjct: 422 VVAALQARVLGSGGGRGAAEYEEIVMRSPESV--LVVGSPENWDSSPGKYVGKRRKEGPA 479

Query: 149 --KKIKFLVRLKSLTKSDSGRRVV 84
             KK+ FLVRL+SLTKSDSGRR V
Sbjct: 480 SEKKVNFLVRLRSLTKSDSGRRGV 503


>ref|XP_002512196.1| ATP binding protein, putative [Ricinus communis]
           gi|223548740|gb|EEF50230.1| ATP binding protein,
           putative [Ricinus communis]
          Length = 517

 Score =  139 bits (351), Expect = 2e-31
 Identities = 79/145 (54%), Positives = 98/145 (67%), Gaps = 17/145 (11%)
 Frame = -1

Query: 467 LGACGIHAFKSLVMNYLGLDSHKLFDVVESYIRSGGALTPAEIGEILLRNRNDADVAIQG 288
           LG CG+HAFK+L MNYLG+DSH LFDV ES IRSGGALTPA+IGEILLRNR + DVA++ 
Sbjct: 373 LGTCGMHAFKALAMNYLGIDSHSLFDVAESCIRSGGALTPAQIGEILLRNRGNTDVALKE 432

Query: 287 VVTALKGGRDAVESDDMVNVPDVIDS--------MLLNSPENSDSSSGKFVGKR------ 150
           VV+A++    +       ++ D  D+        + + SPEN DSS G+  GK+      
Sbjct: 433 VVSAMQARILSSSGTHKEHLTDYEDTATRSPQSVLTVGSPENWDSSPGRIGGKKRKEGGN 492

Query: 149 ---KKIKFLVRLKSLTKSDSGRRVV 84
              KK KFLVRL+SLTKSDSGRR V
Sbjct: 493 NCDKKAKFLVRLRSLTKSDSGRRGV 517


>ref|XP_003546854.1| PREDICTED: uncharacterized protein LOC100820437 [Glycine max]
          Length = 521

 Score =  127 bits (319), Expect = 9e-28
 Identities = 70/140 (50%), Positives = 90/140 (64%), Gaps = 15/140 (10%)
 Frame = -1

Query: 467 LGACGIHAFKSLVMNYLGLDSHKLFDVVESYIRSGGALTPAEIGEILLRNRNDADVAIQG 288
           L  CG HAF+ L  NYLGL+SH LF  VE  IR GGALTPA++GEILLRNR DADVA++ 
Sbjct: 382 LATCGAHAFRELARNYLGLESHVLFQAVEGCIRGGGALTPAQVGEILLRNRGDADVAMRE 441

Query: 287 VVTALKG--------GRDAVESDDMVNVPDVIDSMLLNSPENSDSSSGKFVGKR------ 150
           V+ A++G          D  E+++ V V      +L+ SPEN D+ SGK   ++      
Sbjct: 442 VLAAMQGRMLAVAAAANDQAENEEAVGVRSPESVLLMGSPENWDAFSGKKRKEQHGCNNL 501

Query: 149 -KKIKFLVRLKSLTKSDSGR 93
            KK+KF VRL+SLT+SD GR
Sbjct: 502 DKKVKFFVRLRSLTRSDPGR 521


>emb|CBI32158.3| unnamed protein product [Vitis vinifera]
          Length = 401

 Score =  121 bits (303), Expect = 7e-26
 Identities = 61/108 (56%), Positives = 82/108 (75%), Gaps = 6/108 (5%)
 Frame = -1

Query: 467 LGACGIHAFKSLVMNYLGLDSHKLFDVVESYIRSGGALTPAEIGEILLRNRNDADVAIQG 288
           LG CGIHAFK+L  NYLGL+SH LFDVVES IRSGG LTPA++GEILLRNR DA+VAI+ 
Sbjct: 290 LGTCGIHAFKALAANYLGLESHPLFDVVESCIRSGGTLTPAQVGEILLRNRRDAEVAIKA 349

Query: 287 VVTALK-----GGRDAVESDDMVNVPDVIDSMLLNSPENSDSSS-GKF 162
           V++A++       R+ +E ++M   P+ ++  L+ SPEN ++SS GK+
Sbjct: 350 VISAMQARILGAEREPIEYEEMAKSPESVERGLMESPENWETSSPGKY 397


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