BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00016870
         (690 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002328167.1| predicted protein [Populus trichocarpa] gi|2...   118   1e-24
ref|XP_002269920.2| PREDICTED: DNA polymerase epsilon catalytic ...   117   3e-24
emb|CBI17056.3| unnamed protein product [Vitis vinifera]              117   3e-24
dbj|BAD23092.1| putative DNA polymerase epsilon catalytic subuni...   113   4e-23
ref|NP_001046939.2| Os02g0511900 [Oryza sativa Japonica Group] g...   113   4e-23

>ref|XP_002328167.1| predicted protein [Populus trichocarpa] gi|222837682|gb|EEE76047.1|
            predicted protein [Populus trichocarpa]
          Length = 2221

 Score =  118 bits (296), Expect = 1e-24
 Identities = 58/106 (54%), Positives = 74/106 (69%)
 Frame = -3

Query: 319  NEVLLKLEATS*LENSERLTASPFSVQVPSHTRHHGPTIGVIECPKLNSLKSGIGVLNDF 140
            N ++ K++    ++++E++     S       +HHGPT+ VIECP  + +KSG+  L+DF
Sbjct: 1534 NSIVFKVDYVGHVKDAEKILQGTIS---ELRDKHHGPTLAVIECPNAHLMKSGVPALDDF 1590

Query: 139  PCVSIPCNARDSHYQALGWQIGSAKI*MQRCAASSQWLKERISLSR 2
            PCVSIP NARDS YQ LGWQ  SAKI MQR AASSQWL ERISLSR
Sbjct: 1591 PCVSIPSNARDSQYQVLGWQQASAKIGMQRSAASSQWLNERISLSR 1636


>ref|XP_002269920.2| PREDICTED: DNA polymerase epsilon catalytic subunit A [Vitis
            vinifera]
          Length = 2214

 Score =  117 bits (292), Expect = 3e-24
 Identities = 53/74 (71%), Positives = 63/74 (85%)
 Frame = -3

Query: 223  RHHGPTIGVIECPKLNSLKSGIGVLNDFPCVSIPCNARDSHYQALGWQIGSAKI*MQRCA 44
            +HHGP + VIECP ++ LKSGI  L+D PCV+IP NARDSHYQALGWQI +AKI MQRCA
Sbjct: 1566 QHHGPEVAVIECPNVHLLKSGIRALDDLPCVNIPSNARDSHYQALGWQIVAAKIGMQRCA 1625

Query: 43   ASSQWLKERISLSR 2
            A++QWL ERISL+R
Sbjct: 1626 AATQWLNERISLAR 1639


>emb|CBI17056.3| unnamed protein product [Vitis vinifera]
          Length = 2723

 Score =  117 bits (292), Expect = 3e-24
 Identities = 53/74 (71%), Positives = 63/74 (85%)
 Frame = -3

Query: 223  RHHGPTIGVIECPKLNSLKSGIGVLNDFPCVSIPCNARDSHYQALGWQIGSAKI*MQRCA 44
            +HHGP + VIECP ++ LKSGI  L+D PCV+IP NARDSHYQALGWQI +AKI MQRCA
Sbjct: 2075 QHHGPEVAVIECPNVHLLKSGIRALDDLPCVNIPSNARDSHYQALGWQIVAAKIGMQRCA 2134

Query: 43   ASSQWLKERISLSR 2
            A++QWL ERISL+R
Sbjct: 2135 AATQWLNERISLAR 2148


>dbj|BAD23092.1| putative DNA polymerase epsilon catalytic subunit protein isoform b
            [Oryza sativa Japonica Group]
          Length = 2257

 Score =  113 bits (282), Expect = 4e-23
 Identities = 50/74 (67%), Positives = 61/74 (82%)
 Frame = -3

Query: 223  RHHGPTIGVIECPKLNSLKSGIGVLNDFPCVSIPCNARDSHYQALGWQIGSAKI*MQRCA 44
            +H GP IGVIECPKL +LKS +  L+DFPCV+IPCNARD++YQALGWQ  + +  MQRCA
Sbjct: 1608 QHPGPVIGVIECPKLQALKSAVRALDDFPCVTIPCNARDNNYQALGWQATAGRTSMQRCA 1667

Query: 43   ASSQWLKERISLSR 2
            AS+QW  ERISL+R
Sbjct: 1668 ASTQWFNERISLAR 1681


>ref|NP_001046939.2| Os02g0511900 [Oryza sativa Japonica Group]
            gi|255670933|dbj|BAF08853.2| Os02g0511900 [Oryza sativa
            Japonica Group]
          Length = 2175

 Score =  113 bits (282), Expect = 4e-23
 Identities = 50/74 (67%), Positives = 61/74 (82%)
 Frame = -3

Query: 223  RHHGPTIGVIECPKLNSLKSGIGVLNDFPCVSIPCNARDSHYQALGWQIGSAKI*MQRCA 44
            +H GP IGVIECPKL +LKS +  L+DFPCV+IPCNARD++YQALGWQ  + +  MQRCA
Sbjct: 1484 QHPGPVIGVIECPKLQALKSAVRALDDFPCVTIPCNARDNNYQALGWQATAGRTSMQRCA 1543

Query: 43   ASSQWLKERISLSR 2
            AS+QW  ERISL+R
Sbjct: 1544 ASTQWFNERISLAR 1557