BLASTX nr result

ID: Coptis25_contig00016851 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00016851
         (1666 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002276929.1| PREDICTED: uncharacterized protein LOC100250...   380   e-103
ref|XP_002509884.1| prenyl-dependent CAAX protease, putative [Ri...   362   2e-97
ref|XP_002298001.1| predicted protein [Populus trichocarpa] gi|2...   357   7e-96
ref|XP_002304526.1| predicted protein [Populus trichocarpa] gi|2...   355   2e-95
ref|XP_003533015.1| PREDICTED: uncharacterized protein LOC100814...   354   3e-95

>ref|XP_002276929.1| PREDICTED: uncharacterized protein LOC100250094 [Vitis vinifera]
            gi|297742264|emb|CBI34413.3| unnamed protein product
            [Vitis vinifera]
          Length = 347

 Score =  380 bits (977), Expect = e-103
 Identities = 186/297 (62%), Positives = 210/297 (70%)
 Frame = +3

Query: 711  KRKVCCFRHEEFASRGPXXXXXXXXXXXXXXXXXXXXXXXXXKDFVTTFQEAVGVVFRIP 890
            K K+ CFRHE+ +S  P                         KD+ ++F+EA  V+ R+ 
Sbjct: 51   KWKISCFRHEDSSSETPKSESIDDILSGELVKPEFNKPSTVQKDWASSFREAADVILRVI 110

Query: 891  GQPWTVPWTAQTIFQVILLWIASFWFVGSWIVPFLTHAAGFSKDSLTYRGQALYSLLTDV 1070
            G+PW VPWT++TI QV+LLWI SFWFVGSW++PF  H  GFSK+SLTYRGQALYSLLTDV
Sbjct: 111  GKPWVVPWTSETILQVMLLWIVSFWFVGSWMIPFTAHVVGFSKESLTYRGQALYSLLTDV 170

Query: 1071 AEGLAGIAILHRCLYRFRPLPSDWFQFSLRGKWQLDVGLGCLMFPLVNRLSQVNLNLVPH 1250
            AEGLAGIAILHRCL RF PLPSDWF+FSLRG W  DV +GCLMFPLVNRLSQ NL+L+P 
Sbjct: 171  AEGLAGIAILHRCLSRFSPLPSDWFRFSLRGNWLADVAIGCLMFPLVNRLSQFNLDLLPL 230

Query: 1251 LXXXXXXXXXXXXXXXARDPXXXXXXXXXXXXXXPMWEEIVFRGFLLPSLTKYMPVWCSI 1430
            L               ARDP              P+WEEIVFRGFLLPSLTKYMPVWCSI
Sbjct: 231  LPSTPVTLSSVEQSIMARDPVAMGLYALVVSVCAPVWEEIVFRGFLLPSLTKYMPVWCSI 290

Query: 1431 LVSSVVFALAHFNAQRMLPLIFLGMVMGAVFTRSRNLFAPMLLHSLWNAFVFLNLMK 1601
            LVSSV FALAHFN QRMLPLIFLG+VMG +F RSRNL   MLLHSLWN FVFL+LMK
Sbjct: 291  LVSSVAFALAHFNVQRMLPLIFLGVVMGVIFARSRNLLPSMLLHSLWNGFVFLDLMK 347


>ref|XP_002509884.1| prenyl-dependent CAAX protease, putative [Ricinus communis]
            gi|223549783|gb|EEF51271.1| prenyl-dependent CAAX
            protease, putative [Ricinus communis]
          Length = 355

 Score =  362 bits (928), Expect = 2e-97
 Identities = 177/301 (58%), Positives = 209/301 (69%), Gaps = 4/301 (1%)
 Frame = +3

Query: 711  KRKVCCFRHEEFASRGPXXXXXXXXXXXXXXXXXXXXXXXXX--KDFVTTFQEAVGVVFR 884
            K K+ CF+HE+F+   P                           +D++TT QEA GVVF+
Sbjct: 55   KWKISCFKHEDFSPVNPKSDDVEHCLPEKLAKQPELDNNSTDVKRDWITTLQEAAGVVFQ 114

Query: 885  IPGQPWTVPWTAQTIFQVILLWIASFWFVGSWIVPFLTHAAGFSKDSLTYRGQALYSLLT 1064
              G  WTVPWTA+TI QV+LLW+ SFWF+GSW++PF  H AGF+K+SLT+RGQAL+SL+T
Sbjct: 115  AIGSQWTVPWTAETIIQVMLLWVVSFWFIGSWVIPFAAHIAGFNKESLTFRGQALFSLVT 174

Query: 1065 DVAEGLAGIAILHRCLYRFRPLPSDWFQFSLRGKWQ--LDVGLGCLMFPLVNRLSQVNLN 1238
            DV EGLAGIAILHRCL RF PLPSDWF+FSL+G W   LDV LGC MFPL+NRLSQVNL+
Sbjct: 175  DVTEGLAGIAILHRCLSRFCPLPSDWFRFSLKGNWAWLLDVALGCFMFPLINRLSQVNLS 234

Query: 1239 LVPHLXXXXXXXXXXXXXXXARDPXXXXXXXXXXXXXXPMWEEIVFRGFLLPSLTKYMPV 1418
            L+P L               ARDP              P+WEEI+FRGFLLPSLT+YMPV
Sbjct: 235  LLPILPSAPVTLSSVEQSIAARDPVAMALYAIVVSVCAPVWEEILFRGFLLPSLTRYMPV 294

Query: 1419 WCSILVSSVVFALAHFNAQRMLPLIFLGMVMGAVFTRSRNLFAPMLLHSLWNAFVFLNLM 1598
            WC+ILVSS+ FALAHFN QRMLPLI LG VMG +F RSRNL   MLLHSLWN FVFL+LM
Sbjct: 295  WCAILVSSIAFALAHFNVQRMLPLILLGAVMGVIFARSRNLMPSMLLHSLWNGFVFLDLM 354

Query: 1599 K 1601
            +
Sbjct: 355  R 355


>ref|XP_002298001.1| predicted protein [Populus trichocarpa] gi|222845259|gb|EEE82806.1|
            predicted protein [Populus trichocarpa]
          Length = 300

 Score =  357 bits (915), Expect = 7e-96
 Identities = 175/297 (58%), Positives = 205/297 (69%)
 Frame = +3

Query: 711  KRKVCCFRHEEFASRGPXXXXXXXXXXXXXXXXXXXXXXXXXKDFVTTFQEAVGVVFRIP 890
            K ++  FR+EE +   P                          D++++ +EA  VV R  
Sbjct: 4    KWRISFFRNEEISQVNPGSDSVERYVPEELVKPELDNSTNVEGDWISSLREAAHVVLRAF 63

Query: 891  GQPWTVPWTAQTIFQVILLWIASFWFVGSWIVPFLTHAAGFSKDSLTYRGQALYSLLTDV 1070
            G  WTVPWTA+TI QV+LLW+ SFWF+GSW++PF  H AGF+K+SLT+RGQAL+SL+TDV
Sbjct: 64   GSRWTVPWTAETIVQVMLLWVVSFWFIGSWVIPFAAHIAGFNKESLTFRGQALFSLVTDV 123

Query: 1071 AEGLAGIAILHRCLYRFRPLPSDWFQFSLRGKWQLDVGLGCLMFPLVNRLSQVNLNLVPH 1250
             EGLAGIAILHRCL RFRPL SDWF+F L+G W  DV LGCLMFPLVNRLSQ NL+L+P 
Sbjct: 124  TEGLAGIAILHRCLSRFRPLSSDWFRFRLKGNWVFDVALGCLMFPLVNRLSQFNLSLLPI 183

Query: 1251 LXXXXXXXXXXXXXXXARDPXXXXXXXXXXXXXXPMWEEIVFRGFLLPSLTKYMPVWCSI 1430
            L               ARDP              P+WEEIVFRGFLLPSLT+YMPVWC+I
Sbjct: 184  LPSTPVTLSSVEQSIAARDPVAMALYAIVVSVCAPVWEEIVFRGFLLPSLTRYMPVWCAI 243

Query: 1431 LVSSVVFALAHFNAQRMLPLIFLGMVMGAVFTRSRNLFAPMLLHSLWNAFVFLNLMK 1601
            LVSSV FALAHFN QRMLPLIFLG+VMG +FTRSRNL   MLLHSLWN FVFL+LMK
Sbjct: 244  LVSSVAFALAHFNVQRMLPLIFLGVVMGVIFTRSRNLLPSMLLHSLWNGFVFLDLMK 300


>ref|XP_002304526.1| predicted protein [Populus trichocarpa] gi|222841958|gb|EEE79505.1|
            predicted protein [Populus trichocarpa]
          Length = 343

 Score =  355 bits (911), Expect = 2e-95
 Identities = 173/297 (58%), Positives = 203/297 (68%)
 Frame = +3

Query: 711  KRKVCCFRHEEFASRGPXXXXXXXXXXXXXXXXXXXXXXXXXKDFVTTFQEAVGVVFRIP 890
            K +V CFR+EE +   P                         +D++++ +EA  VV R  
Sbjct: 47   KWRVSCFRNEEISQVNPGSDSVERYVPEELVKPELDNSTNVKRDWISSLREAANVVLRAF 106

Query: 891  GQPWTVPWTAQTIFQVILLWIASFWFVGSWIVPFLTHAAGFSKDSLTYRGQALYSLLTDV 1070
            G  WTVPWTA+TI QV+LLW+ SFWF+GSW++PF  H AGF+K+SLT+RGQAL+SL+TDV
Sbjct: 107  GSSWTVPWTAETIVQVMLLWVVSFWFIGSWLIPFAAHIAGFNKESLTFRGQALFSLVTDV 166

Query: 1071 AEGLAGIAILHRCLYRFRPLPSDWFQFSLRGKWQLDVGLGCLMFPLVNRLSQVNLNLVPH 1250
             EGLAGIAILH CL RF PL SDWF+F L+G W  DV LGCLMFPLVNRLSQ NL+L+P 
Sbjct: 167  TEGLAGIAILHCCLSRFHPLSSDWFRFRLKGNWLFDVALGCLMFPLVNRLSQFNLSLLPI 226

Query: 1251 LXXXXXXXXXXXXXXXARDPXXXXXXXXXXXXXXPMWEEIVFRGFLLPSLTKYMPVWCSI 1430
            L               ARDP              P+WEEIVFRGFLLPSLT+YMPVWC+I
Sbjct: 227  LPSTPVTLSSVEQSIAARDPVAMVLYAIVVSVCAPVWEEIVFRGFLLPSLTRYMPVWCAI 286

Query: 1431 LVSSVVFALAHFNAQRMLPLIFLGMVMGAVFTRSRNLFAPMLLHSLWNAFVFLNLMK 1601
            LVSSV FAL HFN QRMLPLIFLG+VMG +F RSRNL   MLLHSLWN FVFL+LMK
Sbjct: 287  LVSSVAFALVHFNVQRMLPLIFLGVVMGVIFARSRNLLPSMLLHSLWNGFVFLDLMK 343


>ref|XP_003533015.1| PREDICTED: uncharacterized protein LOC100814248 [Glycine max]
          Length = 341

 Score =  354 bits (909), Expect = 3e-95
 Identities = 171/294 (58%), Positives = 201/294 (68%)
 Frame = +3

Query: 720  VCCFRHEEFASRGPXXXXXXXXXXXXXXXXXXXXXXXXXKDFVTTFQEAVGVVFRIPGQP 899
            + CFRH+  +   P                         +D+ +T Q+A   VF++ G  
Sbjct: 48   ILCFRHDHHSPETPQPEVIEHYLHEELVQSEFNDSSVTKRDWKSTIQKAANEVFKVIGYR 107

Query: 900  WTVPWTAQTIFQVILLWIASFWFVGSWIVPFLTHAAGFSKDSLTYRGQALYSLLTDVAEG 1079
            W VPW A TI QV+LLW  +FWF+GSW++PF  H  GFSK+SLT+RGQAL+SL+TDV EG
Sbjct: 108  WVVPWNAMTILQVMLLWTTAFWFIGSWMIPFAAHITGFSKESLTFRGQALFSLVTDVTEG 167

Query: 1080 LAGIAILHRCLYRFRPLPSDWFQFSLRGKWQLDVGLGCLMFPLVNRLSQVNLNLVPHLXX 1259
            LAG+AIL RCL RFRPLP DWF+FSL+G WQLDV +GCLMFPLVNRLSQ NL+L+P L  
Sbjct: 168  LAGVAILLRCLSRFRPLPPDWFEFSLKGNWQLDVIMGCLMFPLVNRLSQFNLDLLPLLPS 227

Query: 1260 XXXXXXXXXXXXXARDPXXXXXXXXXXXXXXPMWEEIVFRGFLLPSLTKYMPVWCSILVS 1439
                         ARDP              P+WEEIVFRGFLLPSLTKYMPVWC+ILVS
Sbjct: 228  TPVTLSSVEQSIRARDPVAMLLYATVVSVCAPVWEEIVFRGFLLPSLTKYMPVWCAILVS 287

Query: 1440 SVVFALAHFNAQRMLPLIFLGMVMGAVFTRSRNLFAPMLLHSLWNAFVFLNLMK 1601
            S+ FALAHFN QRMLPLIFLGMVMG ++TRSRNL   MLLHSLWN FVFL+LMK
Sbjct: 288  SIAFALAHFNIQRMLPLIFLGMVMGVIYTRSRNLLPSMLLHSLWNGFVFLDLMK 341


Top