BLASTX nr result

ID: Coptis25_contig00016841 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00016841
         (1198 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI39615.3| unnamed protein product [Vitis vinifera]              456   e-126
ref|XP_002277385.1| PREDICTED: thiosulfate sulfurtransferase/rho...   456   e-126
emb|CAN64715.1| hypothetical protein VITISV_026716 [Vitis vinifera]   454   e-125
ref|XP_002330075.1| predicted protein [Populus trichocarpa] gi|2...   448   e-123
ref|XP_002512529.1| Protein C9orf97, putative [Ricinus communis]...   428   e-117

>emb|CBI39615.3| unnamed protein product [Vitis vinifera]
          Length = 613

 Score =  456 bits (1173), Expect = e-126
 Identities = 225/319 (70%), Positives = 264/319 (82%), Gaps = 1/319 (0%)
 Frame = +2

Query: 245  DVNGVLLYYKYANVPDLNALHNFYNSNCQSLRLLGRVRLAPHGVNVTVGGKLSCLEEHIA 424
            D  GV+LYYKY  +PD++ L +FY+SNC SL LLGRVRLAP GVNVT+GGKLS LE+HIA
Sbjct: 8    DQYGVVLYYKYTPIPDVDQLFSFYDSNCNSLGLLGRVRLAPDGVNVTIGGKLSLLEKHIA 67

Query: 425  AVKLINLFDGTDFKLASCQDFQSNDNIVKECGFNSLSIRLVKXXXXXXXXXXXXXXXXEL 604
            AVK  +LF+GTDFKLASC     ND + KECGF SLSIR+VK                EL
Sbjct: 68   AVKSNSLFEGTDFKLASCHH-PLNDQVAKECGFTSLSIRVVK----------------EL 110

Query: 605  VTFSSCPLVKSPLLSNAGKHLSAAEFNTILQSAGSV-ENDVPTNRSRVLLLDARNVYETR 781
            VTFS  PL+KSP +SNAG HLSA EF+++LQSAG + E + P+N  +++LLDARN+YETR
Sbjct: 111  VTFSPHPLLKSPEISNAGTHLSAVEFHSVLQSAGPLLEKENPSNHKKLVLLDARNLYETR 170

Query: 782  IGKFQTPNVETLDPKIRQYSDLSTWIDCHSERLQGTKVLMYCTGGIRCEMASAYIRSKGA 961
            IGKF+TPNVETLDP IRQYSDL +WID +SER +G +VLMYCTGGIRCEMASAYIRSKGA
Sbjct: 171  IGKFKTPNVETLDPGIRQYSDLPSWIDDNSERFRGNRVLMYCTGGIRCEMASAYIRSKGA 230

Query: 962  GFENVYQLFGGIQRYMEQFPDGGFFKGKNFVFDHRVSVGSSNPDVVGSCLLCGSPFDDYS 1141
            GFENV+QLFGGIQRY+EQFPDGGFFKGKNFVFDHR+SVGSS+ +++G+CLLCGS FDDYS
Sbjct: 231  GFENVFQLFGGIQRYLEQFPDGGFFKGKNFVFDHRISVGSSDANIMGACLLCGSSFDDYS 290

Query: 1142 SRCRCTYCRMLVLVCDTCQ 1198
            SRCRC +CRMLVLVCD+CQ
Sbjct: 291  SRCRCNHCRMLVLVCDSCQ 309


>ref|XP_002277385.1| PREDICTED: thiosulfate sulfurtransferase/rhodanese-like
            domain-containing protein 2-like [Vitis vinifera]
          Length = 611

 Score =  456 bits (1173), Expect = e-126
 Identities = 225/319 (70%), Positives = 264/319 (82%), Gaps = 1/319 (0%)
 Frame = +2

Query: 245  DVNGVLLYYKYANVPDLNALHNFYNSNCQSLRLLGRVRLAPHGVNVTVGGKLSCLEEHIA 424
            D  GV+LYYKY  +PD++ L +FY+SNC SL LLGRVRLAP GVNVT+GGKLS LE+HIA
Sbjct: 8    DQYGVVLYYKYTPIPDVDQLFSFYDSNCNSLGLLGRVRLAPDGVNVTIGGKLSLLEKHIA 67

Query: 425  AVKLINLFDGTDFKLASCQDFQSNDNIVKECGFNSLSIRLVKXXXXXXXXXXXXXXXXEL 604
            AVK  +LF+GTDFKLASC     ND + KECGF SLSIR+VK                EL
Sbjct: 68   AVKSNSLFEGTDFKLASCHH-PLNDQVAKECGFTSLSIRVVK----------------EL 110

Query: 605  VTFSSCPLVKSPLLSNAGKHLSAAEFNTILQSAGSV-ENDVPTNRSRVLLLDARNVYETR 781
            VTFS  PL+KSP +SNAG HLSA EF+++LQSAG + E + P+N  +++LLDARN+YETR
Sbjct: 111  VTFSPHPLLKSPEISNAGTHLSAVEFHSVLQSAGPLLEKENPSNHKKLVLLDARNLYETR 170

Query: 782  IGKFQTPNVETLDPKIRQYSDLSTWIDCHSERLQGTKVLMYCTGGIRCEMASAYIRSKGA 961
            IGKF+TPNVETLDP IRQYSDL +WID +SER +G +VLMYCTGGIRCEMASAYIRSKGA
Sbjct: 171  IGKFKTPNVETLDPGIRQYSDLPSWIDDNSERFRGNRVLMYCTGGIRCEMASAYIRSKGA 230

Query: 962  GFENVYQLFGGIQRYMEQFPDGGFFKGKNFVFDHRVSVGSSNPDVVGSCLLCGSPFDDYS 1141
            GFENV+QLFGGIQRY+EQFPDGGFFKGKNFVFDHR+SVGSS+ +++G+CLLCGS FDDYS
Sbjct: 231  GFENVFQLFGGIQRYLEQFPDGGFFKGKNFVFDHRISVGSSDANIMGACLLCGSSFDDYS 290

Query: 1142 SRCRCTYCRMLVLVCDTCQ 1198
            SRCRC +CRMLVLVCD+CQ
Sbjct: 291  SRCRCNHCRMLVLVCDSCQ 309


>emb|CAN64715.1| hypothetical protein VITISV_026716 [Vitis vinifera]
          Length = 634

 Score =  454 bits (1169), Expect = e-125
 Identities = 225/319 (70%), Positives = 263/319 (82%), Gaps = 1/319 (0%)
 Frame = +2

Query: 245  DVNGVLLYYKYANVPDLNALHNFYNSNCQSLRLLGRVRLAPHGVNVTVGGKLSCLEEHIA 424
            D  GV+LYYKY  +PD++ L +FY+SNC SL LLGRVRLAP GVNVT+GGKLS LE+HIA
Sbjct: 8    DQYGVVLYYKYTPIPDVDQLFSFYDSNCNSLGLLGRVRLAPDGVNVTIGGKLSLLEKHIA 67

Query: 425  AVKLINLFDGTDFKLASCQDFQSNDNIVKECGFNSLSIRLVKXXXXXXXXXXXXXXXXEL 604
            AVK  +LF+GTDFKLASC     ND + KECGF SLSIR+VK                EL
Sbjct: 68   AVKSNSLFEGTDFKLASCHH-PLNDQVAKECGFTSLSIRVVK----------------EL 110

Query: 605  VTFSSCPLVKSPLLSNAGKHLSAAEFNTILQSAGSV-ENDVPTNRSRVLLLDARNVYETR 781
            VTFS  PL+KSP +SNAG HLSA EF+++LQSAG + E + P+N  +++LLDARN+YETR
Sbjct: 111  VTFSPHPLLKSPEISNAGTHLSAVEFHSVLQSAGPLLEKENPSNHKKLVLLDARNLYETR 170

Query: 782  IGKFQTPNVETLDPKIRQYSDLSTWIDCHSERLQGTKVLMYCTGGIRCEMASAYIRSKGA 961
            IGKF+TPNVETLDP IRQYSDL +WID +SER +G +VLMYCTGGIRCEMASAYIRSKGA
Sbjct: 171  IGKFKTPNVETLDPGIRQYSDLPSWIDDNSERFRGNRVLMYCTGGIRCEMASAYIRSKGA 230

Query: 962  GFENVYQLFGGIQRYMEQFPDGGFFKGKNFVFDHRVSVGSSNPDVVGSCLLCGSPFDDYS 1141
            GFENV+QLFGGIQRY+EQFPDGGFFKGKNFVFDHR+SVGSS+ +++G+CLLCGS FDDYS
Sbjct: 231  GFENVFQLFGGIQRYLEQFPDGGFFKGKNFVFDHRISVGSSDANIMGACLLCGSSFDDYS 290

Query: 1142 SRCRCTYCRMLVLVCDTCQ 1198
            SRCRC  CRMLVLVCD+CQ
Sbjct: 291  SRCRCNRCRMLVLVCDSCQ 309


>ref|XP_002330075.1| predicted protein [Populus trichocarpa] gi|222871500|gb|EEF08631.1|
            predicted protein [Populus trichocarpa]
          Length = 590

 Score =  448 bits (1152), Expect = e-123
 Identities = 223/321 (69%), Positives = 261/321 (81%)
 Frame = +2

Query: 236  EEKDVNGVLLYYKYANVPDLNALHNFYNSNCQSLRLLGRVRLAPHGVNVTVGGKLSCLEE 415
            +E++  GVLLYYKY  +PDLN+L +FYNSNC SL LLGRVRL+ HGVNVTVGGKLS LE+
Sbjct: 17   QEQEQYGVLLYYKYTEIPDLNSLLSFYNSNCTSLSLLGRVRLSLHGVNVTVGGKLSSLEK 76

Query: 416  HIAAVKLINLFDGTDFKLASCQDFQSNDNIVKECGFNSLSIRLVKXXXXXXXXXXXXXXX 595
            HI AVK I+LF+GTDFKLASC  F  ND +  ECGF SLSIR+VK               
Sbjct: 77   HIEAVKAISLFEGTDFKLASCH-FPLNDKVAHECGFTSLSIRIVK--------------- 120

Query: 596  XELVTFSSCPLVKSPLLSNAGKHLSAAEFNTILQSAGSVENDVPTNRSRVLLLDARNVYE 775
             ELVTFS  PLVK+P +SNAG+HLSA EF++ LQSAG + +D       ++LLDARN+YE
Sbjct: 121  -ELVTFSPYPLVKAPDVSNAGRHLSAVEFHSALQSAGDLADD-----KGLVLLDARNLYE 174

Query: 776  TRIGKFQTPNVETLDPKIRQYSDLSTWIDCHSERLQGTKVLMYCTGGIRCEMASAYIRSK 955
            TRIGKF  PNV+TLDP IRQYSDL +WID +SE+L+G  VLMYCTGGIRCEMASAYIRSK
Sbjct: 175  TRIGKFDMPNVDTLDPGIRQYSDLPSWIDDNSEQLRGKNVLMYCTGGIRCEMASAYIRSK 234

Query: 956  GAGFENVYQLFGGIQRYMEQFPDGGFFKGKNFVFDHRVSVGSSNPDVVGSCLLCGSPFDD 1135
            GAGFENV+QLFGGIQRY+EQFPDGGFFKGKNFVFDHR+SV SS+ +++G+CLLCG  FDD
Sbjct: 235  GAGFENVFQLFGGIQRYLEQFPDGGFFKGKNFVFDHRISVXSSDTNILGTCLLCGLSFDD 294

Query: 1136 YSSRCRCTYCRMLVLVCDTCQ 1198
            YSSRCRC+YCRMLVLVCD+C+
Sbjct: 295  YSSRCRCSYCRMLVLVCDSCR 315


>ref|XP_002512529.1| Protein C9orf97, putative [Ricinus communis]
            gi|223548490|gb|EEF49981.1| Protein C9orf97, putative
            [Ricinus communis]
          Length = 541

 Score =  428 bits (1100), Expect = e-117
 Identities = 213/315 (67%), Positives = 253/315 (80%)
 Frame = +2

Query: 254  GVLLYYKYANVPDLNALHNFYNSNCQSLRLLGRVRLAPHGVNVTVGGKLSCLEEHIAAVK 433
            GVLLYYKY  +PDLN+L +FYNSNC SL LLGRVRL+  GVNVTVGG LS L++HIAAV+
Sbjct: 17   GVLLYYKYTLIPDLNSLLSFYNSNCTSLSLLGRVRLSSRGVNVTVGGLLSSLKKHIAAVE 76

Query: 434  LINLFDGTDFKLASCQDFQSNDNIVKECGFNSLSIRLVKXXXXXXXXXXXXXXXXELVTF 613
            L+ LF+GTDFKLA+   +  ND + +ECGF SLSIR+VK                ELVTF
Sbjct: 77   LLKLFEGTDFKLAASH-YPLNDKVARECGFTSLSIRIVK----------------ELVTF 119

Query: 614  SSCPLVKSPLLSNAGKHLSAAEFNTILQSAGSVENDVPTNRSRVLLLDARNVYETRIGKF 793
            SS PL+K P +SNAGKHLSA EF++ L+SAG  E     +   ++LLDARN+YETRIGKF
Sbjct: 120  SSYPLLKQPDVSNAGKHLSAFEFHSALKSAGQREGS--KSNEGLVLLDARNLYETRIGKF 177

Query: 794  QTPNVETLDPKIRQYSDLSTWIDCHSERLQGTKVLMYCTGGIRCEMASAYIRSKGAGFEN 973
              P+VETLDP+IRQYSDL +WID +SE+L+G +VLMYCTGGIRCEMASAYI+SKGAGFEN
Sbjct: 178  HVPSVETLDPEIRQYSDLPSWIDDNSEQLRGKQVLMYCTGGIRCEMASAYIKSKGAGFEN 237

Query: 974  VYQLFGGIQRYMEQFPDGGFFKGKNFVFDHRVSVGSSNPDVVGSCLLCGSPFDDYSSRCR 1153
            ++QLFGGIQRY+EQFPDGG FKGKNFVFDHR+SV SS+ +++G CL CG  FDDYSSRCR
Sbjct: 238  IFQLFGGIQRYLEQFPDGGHFKGKNFVFDHRISVASSDTNILGMCLTCGMSFDDYSSRCR 297

Query: 1154 CTYCRMLVLVCDTCQ 1198
            C+YCRMLVLVCD CQ
Sbjct: 298  CSYCRMLVLVCDGCQ 312


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