BLASTX nr result

ID: Coptis25_contig00016837 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00016837
         (721 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002532131.1| conserved hypothetical protein [Ricinus comm...    46   3e-07

>ref|XP_002532131.1| conserved hypothetical protein [Ricinus communis]
            gi|223528190|gb|EEF30251.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 1033

 Score = 46.2 bits (108), Expect(2) = 3e-07
 Identities = 28/77 (36%), Positives = 39/77 (50%), Gaps = 5/77 (6%)
 Frame = -3

Query: 638  NMLDSGDISXXXXXXXXXXXLEQVANXXXXXXXXXXXDAETDAPSDLAE-----GDGDES 474
            N+LDS ++S           L+QVAN           D E D PSD+ E      DGD+S
Sbjct: 900  NLLDSANLSLEADGEYDYDDLDQVANEDDDDLIGDVSDVEMDLPSDMGEAFDGIADGDKS 959

Query: 473  DGLDHVDVGDADGFSEE 423
            D ++ +D+GDAD  S +
Sbjct: 960  DDVEAIDIGDADDGSND 976



 Score = 34.3 bits (77), Expect(2) = 3e-07
 Identities = 14/17 (82%), Positives = 16/17 (94%)
 Frame = -2

Query: 318  ASPFASLEEYNHLLNED 268
            ASPFA+LE+Y HLLNED
Sbjct: 995  ASPFANLEDYEHLLNED 1011


Top