BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00016830
         (697 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002520966.1| RNA binding protein, putative [Ricinus commu...    44   3e-06

>ref|XP_002520966.1| RNA binding protein, putative [Ricinus communis]
           gi|223539803|gb|EEF41383.1| RNA binding protein,
           putative [Ricinus communis]
          Length = 383

 Score = 44.3 bits (103), Expect(2) = 3e-06
 Identities = 22/43 (51%), Positives = 25/43 (58%)
 Frame = +3

Query: 267 GSIHLKGFQRSNLRVRQAWQNNKWVVIEKV*INLPFHQEVTNN 395
           GSI LK F  S LR+ Q W  NKW V+EKV  N    +E T N
Sbjct: 106 GSIQLKEFHESKLRIHQTWNKNKWSVMEKVAQNKEPTKESTEN 148



 Score = 32.7 bits (73), Expect(2) = 3e-06
 Identities = 23/66 (34%), Positives = 32/66 (48%), Gaps = 11/66 (16%)
 Frame = +2

Query: 53  SWFPGIIISEDIDIHTLLDIYLSIMKMLGLIRHQ*RE*ER-----------MVGDSAEAF 199
           SWFPG +IS D D + +    L+  +   +I    +E  R           MVGD AE F
Sbjct: 21  SWFPGYLISVDGDCYIVRYYLLADPEGEPVIEKVHKEDVRPQPPSKRKKRWMVGDVAEVF 80

Query: 200 NLQCWR 217
           ++Q WR
Sbjct: 81  DIQRWR 86