BLASTX nr result

ID: Coptis25_contig00016821 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00016821
         (526 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAA32518.1| endo-xyloglucan transferase (EXGT) [Nicotiana ta...   263   1e-68
sp|P93349.1|XTH_TOBAC RecName: Full=Probable xyloglucan endotran...   263   1e-68
ref|NP_001233858.1| probable xyloglucan endotransglucosylase/hyd...   257   6e-67
ref|XP_002304625.1| predicted protein [Populus trichocarpa] gi|2...   253   2e-65
ref|NP_001234369.1| xyloglucan endotransglycosylase precursor [S...   252   3e-65

>dbj|BAA32518.1| endo-xyloglucan transferase (EXGT) [Nicotiana tabacum]
          Length = 295

 Score =  263 bits (672), Expect = 1e-68
 Identities = 115/141 (81%), Positives = 125/141 (88%)
 Frame = -3

Query: 524 WNMYHIAFFVDNVPIRIFKNSKDLGVRFPFNQPMKIYSSLWNADDWATRGGLEKTDWSKA 345
           WN + I  FVD+VPIR FKNSKDLGV+FPFNQPMKIYSSLW+ADDWATRGGLEKTDWS A
Sbjct: 155 WNTFQIVIFVDDVPIRAFKNSKDLGVKFPFNQPMKIYSSLWDADDWATRGGLEKTDWSNA 214

Query: 344 PFIASYTSFHVDGCDATTPQSAQVCSTTGMKWWDQKAFQDLDGLQYRRLGWVRKKYTIYN 165
           PF ASYTSFHVDGC+A TPQ  QVC+T GM+WWDQKAFQDLD LQYRRL WVR+KYTIYN
Sbjct: 215 PFTASYTSFHVDGCEAATPQEVQVCNTKGMRWWDQKAFQDLDALQYRRLRWVRQKYTIYN 274

Query: 164 YCTDRSRYTTVPPECVRDRDI 102
           YCTDR RY T+PPEC +DRDI
Sbjct: 275 YCTDRKRYPTLPPECTKDRDI 295


>sp|P93349.1|XTH_TOBAC RecName: Full=Probable xyloglucan endotransglucosylase/hydrolase
           protein; Flags: Precursor gi|1498168|dbj|BAA13163.1|
           endoxyloglucan transferase related protein [Nicotiana
           tabacum]
          Length = 295

 Score =  263 bits (672), Expect = 1e-68
 Identities = 115/141 (81%), Positives = 125/141 (88%)
 Frame = -3

Query: 524 WNMYHIAFFVDNVPIRIFKNSKDLGVRFPFNQPMKIYSSLWNADDWATRGGLEKTDWSKA 345
           WN + I  FVD+VPIR FKNSKDLGV+FPFNQPMKIYSSLW+ADDWATRGGLEKTDWS A
Sbjct: 155 WNTFQIVIFVDDVPIRAFKNSKDLGVKFPFNQPMKIYSSLWDADDWATRGGLEKTDWSNA 214

Query: 344 PFIASYTSFHVDGCDATTPQSAQVCSTTGMKWWDQKAFQDLDGLQYRRLGWVRKKYTIYN 165
           PF ASYTSFHVDGC+A TPQ  QVC+T GM+WWDQKAFQDLD LQYRRL WVR+KYTIYN
Sbjct: 215 PFTASYTSFHVDGCEAATPQEVQVCNTKGMRWWDQKAFQDLDALQYRRLRWVRQKYTIYN 274

Query: 164 YCTDRSRYTTVPPECVRDRDI 102
           YCTDR RY T+PPEC +DRDI
Sbjct: 275 YCTDRKRYPTLPPECTKDRDI 295


>ref|NP_001233858.1| probable xyloglucan endotransglucosylase/hydrolase 1 precursor
           [Solanum lycopersicum]
           gi|38605155|sp|Q40144.1|XTH1_SOLLC RecName:
           Full=Probable xyloglucan endotransglucosylase/hydrolase
           1; Short=LeXTH1; Flags: Precursor
           gi|469509|dbj|BAA03923.1| endo-xyloglucan transferase
           [Solanum lycopersicum]
          Length = 296

 Score =  257 bits (657), Expect = 6e-67
 Identities = 112/141 (79%), Positives = 124/141 (87%)
 Frame = -3

Query: 524 WNMYHIAFFVDNVPIRIFKNSKDLGVRFPFNQPMKIYSSLWNADDWATRGGLEKTDWSKA 345
           WN Y I  FVD+VPIR FKNSKDLGV+FPFNQPMKIYSSLW+ADDWATRGGLEKT+W+ A
Sbjct: 156 WNTYLIVIFVDDVPIRAFKNSKDLGVKFPFNQPMKIYSSLWDADDWATRGGLEKTNWANA 215

Query: 344 PFIASYTSFHVDGCDATTPQSAQVCSTTGMKWWDQKAFQDLDGLQYRRLGWVRKKYTIYN 165
           PF ASYTSFHVDGC+A TPQ  QVC+T GMKWWDQKAFQDLD LQYRRL WVR+KYT+YN
Sbjct: 216 PFTASYTSFHVDGCEAATPQEVQVCNTKGMKWWDQKAFQDLDALQYRRLRWVRQKYTVYN 275

Query: 164 YCTDRSRYTTVPPECVRDRDI 102
           YCTD++RY   PPEC +DRDI
Sbjct: 276 YCTDKARYPVPPPECTKDRDI 296


>ref|XP_002304625.1| predicted protein [Populus trichocarpa] gi|222842057|gb|EEE79604.1|
           predicted protein [Populus trichocarpa]
          Length = 294

 Score =  253 bits (645), Expect = 2e-65
 Identities = 113/141 (80%), Positives = 124/141 (87%)
 Frame = -3

Query: 524 WNMYHIAFFVDNVPIRIFKNSKDLGVRFPFNQPMKIYSSLWNADDWATRGGLEKTDWSKA 345
           WNMY I F VD+VPIR+FKN KDLGV+FPFNQPMKIYSSLWNADDWATRGGLEKTDWSKA
Sbjct: 156 WNMYIIVFLVDDVPIRVFKNCKDLGVKFPFNQPMKIYSSLWNADDWATRGGLEKTDWSKA 215

Query: 344 PFIASYTSFHVDGCDATTPQSAQVCSTTGMKWWDQKAFQDLDGLQYRRLGWVRKKYTIYN 165
           PFIASY SFHVDGC+A+    A+ C+T G +WWDQK FQDLD LQYRRL WVR+KYTIYN
Sbjct: 216 PFIASYRSFHVDGCEASV--EAKFCATQGARWWDQKEFQDLDALQYRRLSWVRQKYTIYN 273

Query: 164 YCTDRSRYTTVPPECVRDRDI 102
           YCTDRSRY ++PPEC RDRDI
Sbjct: 274 YCTDRSRYPSMPPECKRDRDI 294


>ref|NP_001234369.1| xyloglucan endotransglycosylase precursor [Solanum lycopersicum]
           gi|12003049|gb|AAG43444.1|AF186777_1 xyloglucan
           endotransglycosylase [Solanum lycopersicum]
          Length = 293

 Score =  252 bits (643), Expect = 3e-65
 Identities = 110/141 (78%), Positives = 124/141 (87%)
 Frame = -3

Query: 524 WNMYHIAFFVDNVPIRIFKNSKDLGVRFPFNQPMKIYSSLWNADDWATRGGLEKTDWSKA 345
           WN Y IA FVD+VPIR+FKNSKD+GV+FPFNQPMKIYSSLWNADDWATRGGLEKT+WS A
Sbjct: 153 WNTYQIAIFVDDVPIRVFKNSKDIGVKFPFNQPMKIYSSLWNADDWATRGGLEKTNWSGA 212

Query: 344 PFIASYTSFHVDGCDATTPQSAQVCSTTGMKWWDQKAFQDLDGLQYRRLGWVRKKYTIYN 165
           PFIASYTSFH+DGC+A TPQ  QVC+T GMKWWDQKAFQDLDG +YR+L  VR+ + IYN
Sbjct: 213 PFIASYTSFHIDGCEAVTPQEVQVCNTNGMKWWDQKAFQDLDGPEYRKLHRVRQNFXIYN 272

Query: 164 YCTDRSRYTTVPPECVRDRDI 102
           YCTDR RY T+P EC RDRD+
Sbjct: 273 YCTDRKRYPTLPLECTRDRDL 293


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