BLASTX nr result

ID: Coptis25_contig00016820 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00016820
         (732 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002305487.1| predicted protein [Populus trichocarpa] gi|2...   200   3e-49
ref|XP_002312978.1| predicted protein [Populus trichocarpa] gi|2...   197   2e-48
emb|CAA04449.1| proline-rich protein [Solanum tuberosum]              194   2e-47
ref|XP_003631574.1| PREDICTED: uncharacterized protein LOC100245...   192   5e-47
emb|CBI37919.3| unnamed protein product [Vitis vinifera]              192   5e-47

>ref|XP_002305487.1| predicted protein [Populus trichocarpa] gi|222848451|gb|EEE85998.1|
           predicted protein [Populus trichocarpa]
          Length = 266

 Score =  200 bits (508), Expect = 3e-49
 Identities = 97/164 (59%), Positives = 115/164 (70%)
 Frame = +1

Query: 136 FCYCHDKTVQVIGVGECSDCAQTNIKSQHALSGLHIAIDCKEENGNLKTRGVGKLDKEGK 315
           FCY  DKTV+V+G GEC+DCA++NIK+ HA SGL + IDCK ENG  KTRG G+LD+EGK
Sbjct: 14  FCYAGDKTVEVVGTGECADCAESNIKTVHAFSGLRVTIDCKPENGEFKTRGFGELDEEGK 73

Query: 316 FTVTLPSEILKDDGXXXXXXXXXXXXXXXXXXXXXXXXXXLKEECFAQLHSASSAPCPAH 495
           F V+LPSE++KD                            LKEEC+AQLHSAS+APCP+H
Sbjct: 74  FKVSLPSEVVKDG--------------------------KLKEECYAQLHSASAAPCPSH 107

Query: 496 NGLEASKIIFKSKDYGKHTFQPTGKLVFSPVTCTSAFLWPFFKY 627
           +GLE+SKI+ KSK   KHTF   GKL FSPVTCTSAFLWP FKY
Sbjct: 108 DGLESSKIVLKSKTDEKHTFGLAGKLKFSPVTCTSAFLWPHFKY 151


>ref|XP_002312978.1| predicted protein [Populus trichocarpa] gi|222849386|gb|EEE86933.1|
           predicted protein [Populus trichocarpa]
          Length = 288

 Score =  197 bits (501), Expect = 2e-48
 Identities = 95/160 (59%), Positives = 113/160 (70%)
 Frame = +1

Query: 136 FCYCHDKTVQVIGVGECSDCAQTNIKSQHALSGLHIAIDCKEENGNLKTRGVGKLDKEGK 315
           FCY  D T +V+G+GEC+DCAQ+NIK+ HA SGL + IDCK ENG  KTRGVG+LD+EGK
Sbjct: 14  FCYADDSTAEVVGIGECADCAQSNIKTVHAFSGLKVTIDCKPENGEFKTRGVGELDEEGK 73

Query: 316 FTVTLPSEILKDDGXXXXXXXXXXXXXXXXXXXXXXXXXXLKEECFAQLHSASSAPCPAH 495
           F V+LP++++KD                            LKEEC+AQLHSAS+APCPAH
Sbjct: 74  FKVSLPNDVVKDG--------------------------KLKEECYAQLHSASAAPCPAH 107

Query: 496 NGLEASKIIFKSKDYGKHTFQPTGKLVFSPVTCTSAFLWP 615
           NGLE+SKI+FKSK   KHTF   GKL FSPVTCTSAFLWP
Sbjct: 108 NGLESSKIVFKSKTDEKHTFGLAGKLKFSPVTCTSAFLWP 147


>emb|CAA04449.1| proline-rich protein [Solanum tuberosum]
          Length = 491

 Score =  194 bits (492), Expect = 2e-47
 Identities = 95/181 (52%), Positives = 116/181 (64%)
 Frame = +1

Query: 136 FCYCHDKTVQVIGVGECSDCAQTNIKSQHALSGLHIAIDCKEENGNLKTRGVGKLDKEGK 315
           FC   DKT++V+G GEC+DC + NI + HALSGLH++IDCK ENG +KTRG G+LD++GK
Sbjct: 23  FCIADDKTIKVVGFGECADCKENNINTIHALSGLHVSIDCKLENGEIKTRGEGELDQDGK 82

Query: 316 FTVTLPSEILKDDGXXXXXXXXXXXXXXXXXXXXXXXXXXLKEECFAQLHSASSAPCPAH 495
           F V+LP E++KD                            LKEEC+AQLHSAS+APCPAH
Sbjct: 83  FEVSLPKEMMKDG--------------------------KLKEECYAQLHSASAAPCPAH 116

Query: 496 NGLEASKIIFKSKDYGKHTFQPTGKLVFSPVTCTSAFLWPFFKYXXXXXXXXXXKVHPWY 675
           NG+E+SKII    D GKHT +P G L FS   CTSAFLWP+FKY          K HPW 
Sbjct: 117 NGIESSKIITIKTD-GKHTLEPAGNLKFSTPLCTSAFLWPYFKYPPLPQLPPFPKDHPWM 175

Query: 676 K 678
           K
Sbjct: 176 K 176


>ref|XP_003631574.1| PREDICTED: uncharacterized protein LOC100245206 [Vitis vinifera]
          Length = 501

 Score =  192 bits (489), Expect = 5e-47
 Identities = 97/186 (52%), Positives = 116/186 (62%), Gaps = 5/186 (2%)
 Frame = +1

Query: 136 FCYCHDKTVQVIGVGECSDCAQTNIKSQHALSGLHIAIDCKEENGNLKTRGVGKLDKEGK 315
           FC+   + V+V+G+GEC+DC Q NIK+  A SGL + IDCK  NG  KTR VG+LD+EGK
Sbjct: 24  FCHGSVQKVEVVGIGECADCKQRNIKTSQAFSGLRVTIDCKLANGEFKTRAVGELDEEGK 83

Query: 316 FTVTLPSEILKDDGXXXXXXXXXXXXXXXXXXXXXXXXXXLKEECFAQLHSASSAPCPAH 495
           F V+LP EI+KD                            LKEECFAQLHSAS+ PCPAH
Sbjct: 84  FKVSLPEEIVKDG--------------------------ELKEECFAQLHSASATPCPAH 117

Query: 496 NGLEASKIIFKSKDYGKHTFQPTGKLVFSPVTCTSAFLWPFFKY-----XXXXXXXXXXK 660
           NGLE+SK+I K+K  GKHTF P GKL FSP TCTSAFLWP++K+               K
Sbjct: 118 NGLESSKLILKTKVDGKHTFGPAGKLKFSPATCTSAFLWPYYKHPQLPKVSWPKLPPYSK 177

Query: 661 VHPWYK 678
            HPWYK
Sbjct: 178 SHPWYK 183


>emb|CBI37919.3| unnamed protein product [Vitis vinifera]
          Length = 278

 Score =  192 bits (489), Expect = 5e-47
 Identities = 97/186 (52%), Positives = 116/186 (62%), Gaps = 5/186 (2%)
 Frame = +1

Query: 136 FCYCHDKTVQVIGVGECSDCAQTNIKSQHALSGLHIAIDCKEENGNLKTRGVGKLDKEGK 315
           FC+   + V+V+G+GEC+DC Q NIK+  A SGL + IDCK  NG  KTR VG+LD+EGK
Sbjct: 24  FCHGSVQKVEVVGIGECADCKQRNIKTSQAFSGLRVTIDCKLANGEFKTRAVGELDEEGK 83

Query: 316 FTVTLPSEILKDDGXXXXXXXXXXXXXXXXXXXXXXXXXXLKEECFAQLHSASSAPCPAH 495
           F V+LP EI+KD                            LKEECFAQLHSAS+ PCPAH
Sbjct: 84  FKVSLPEEIVKDG--------------------------ELKEECFAQLHSASATPCPAH 117

Query: 496 NGLEASKIIFKSKDYGKHTFQPTGKLVFSPVTCTSAFLWPFFKY-----XXXXXXXXXXK 660
           NGLE+SK+I K+K  GKHTF P GKL FSP TCTSAFLWP++K+               K
Sbjct: 118 NGLESSKLILKTKVDGKHTFGPAGKLKFSPATCTSAFLWPYYKHPQLPKVSWPKLPPYSK 177

Query: 661 VHPWYK 678
            HPWYK
Sbjct: 178 SHPWYK 183


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