BLASTX nr result

ID: Coptis25_contig00016819 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00016819
         (223 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN75924.1| hypothetical protein VITISV_029516 [Vitis vinife...    79   4e-13
ref|XP_003523509.1| PREDICTED: uncharacterized protein LOC100799...    72   5e-11
ref|XP_003607070.1| Kinesin-related protein [Medicago truncatula...    71   8e-11
emb|CBI17403.3| unnamed protein product [Vitis vinifera]               68   7e-10
ref|XP_002313758.1| predicted protein [Populus trichocarpa] gi|2...    67   1e-09

>emb|CAN75924.1| hypothetical protein VITISV_029516 [Vitis vinifera]
           gi|297744725|emb|CBI37987.3| unnamed protein product
           [Vitis vinifera]
          Length = 969

 Score = 79.0 bits (193), Expect = 4e-13
 Identities = 42/74 (56%), Positives = 53/74 (71%), Gaps = 1/74 (1%)
 Frame = -3

Query: 221 SIQSFVAGLKKRTKIQYENKLVDNQA-QAGLKTDGSEKTVKGLGSDPVRVPHEMPSSWPL 45
           SIQ+FVAGLK+  K+QYE +LVD Q  + G + D  EK VK +G DP++    +P  WPL
Sbjct: 734 SIQTFVAGLKEMAKLQYEKQLVDGQVEETGTRADKLEKNVKDVGLDPMQ-EGTLP-DWPL 791

Query: 44  EFERQQMELIELWQ 3
           EFERQQ E+IELWQ
Sbjct: 792 EFERQQREIIELWQ 805


>ref|XP_003523509.1| PREDICTED: uncharacterized protein LOC100799379 [Glycine max]
          Length = 897

 Score = 72.0 bits (175), Expect = 5e-11
 Identities = 33/73 (45%), Positives = 49/73 (67%)
 Frame = -3

Query: 221 SIQSFVAGLKKRTKIQYENKLVDNQAQAGLKTDGSEKTVKGLGSDPVRVPHEMPSSWPLE 42
           S+Q+FVAG+K+  K++YE +LVD+  QA   T   EK +K +G   +    E P  WPL+
Sbjct: 665 SLQTFVAGMKEMVKLEYEKQLVDDDQQAETTTFRFEKNMKDVGVGSMLEAPESPVEWPLQ 724

Query: 41  FERQQMELIELWQ 3
           F++QQ E++ELWQ
Sbjct: 725 FKQQQTEIVELWQ 737


>ref|XP_003607070.1| Kinesin-related protein [Medicago truncatula]
           gi|355508125|gb|AES89267.1| Kinesin-related protein
           [Medicago truncatula]
          Length = 853

 Score = 71.2 bits (173), Expect = 8e-11
 Identities = 35/73 (47%), Positives = 49/73 (67%)
 Frame = -3

Query: 221 SIQSFVAGLKKRTKIQYENKLVDNQAQAGLKTDGSEKTVKGLGSDPVRVPHEMPSSWPLE 42
           SI +FVAG+K+  K++YE +LVD Q Q   +TD   + VK +G DP++     P  W L+
Sbjct: 643 SIHTFVAGMKEMVKLEYEKQLVDAQGQ---ETDRKLRNVKDVGVDPMQEAPGTPLDWSLQ 699

Query: 41  FERQQMELIELWQ 3
           F+RQQ E+IELWQ
Sbjct: 700 FKRQQKEIIELWQ 712


>emb|CBI17403.3| unnamed protein product [Vitis vinifera]
          Length = 973

 Score = 68.2 bits (165), Expect = 7e-10
 Identities = 33/72 (45%), Positives = 48/72 (66%)
 Frame = -3

Query: 221 SIQSFVAGLKKRTKIQYENKLVDNQAQAGLKTDGSEKTVKGLGSDPVRVPHEMPSSWPLE 42
           S+ ++VAGLK+  K QYE +L D+Q ++  + + S K VK +G DP++     PS WP E
Sbjct: 738 SLNTYVAGLKEMAKFQYEERLADDQ-ESEPEANKSVKNVKDVGLDPIQDDLASPSRWPFE 796

Query: 41  FERQQMELIELW 6
           F+R Q E+IELW
Sbjct: 797 FKRLQKEIIELW 808


>ref|XP_002313758.1| predicted protein [Populus trichocarpa] gi|222850166|gb|EEE87713.1|
           predicted protein [Populus trichocarpa]
          Length = 945

 Score = 67.4 bits (163), Expect = 1e-09
 Identities = 33/76 (43%), Positives = 48/76 (63%), Gaps = 3/76 (3%)
 Frame = -3

Query: 221 SIQSFVAGLKKRTKIQYENKLVDNQAQ---AGLKTDGSEKTVKGLGSDPVRVPHEMPSSW 51
           SI +FVAG+++  + +YE +LVD Q Q   A    D  EK+ + +G DP+    +   +W
Sbjct: 704 SIHTFVAGMREMAQEEYEKQLVDGQVQETEASTMADKYEKSSRDIGLDPMHESLKTSPNW 763

Query: 50  PLEFERQQMELIELWQ 3
           PLEFERQQ  ++ELWQ
Sbjct: 764 PLEFERQQRAMLELWQ 779


Top