BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00016811
         (743 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002311601.1| predicted protein [Populus trichocarpa] gi|1...   314   1e-83
ref|XP_002277278.1| PREDICTED: uncharacterized protein LOC100253...   311   9e-83
sp|Q9LL85.1|WHY1_SOLTU RecName: Full=Single-stranded DNA-bindig ...   311   1e-82
ref|XP_002520128.1| conserved hypothetical protein [Ricinus comm...   309   3e-82
gb|ADL36850.1| WHY domain class transcription factor [Malus x do...   308   6e-82

>ref|XP_002311601.1| predicted protein [Populus trichocarpa] gi|118485247|gb|ABK94483.1|
           unknown [Populus trichocarpa]
           gi|222851421|gb|EEE88968.1| predicted protein [Populus
           trichocarpa]
          Length = 265

 Score =  314 bits (804), Expect = 1e-83
 Identities = 151/185 (81%), Positives = 169/185 (91%), Gaps = 2/185 (1%)
 Frame = -1

Query: 743 PRVFVGHSIYKGKAALTIEPKAPDFSPLDSGAYKLSKEGFVLLQFAPASGVRQYDWSRKQ 564
           P+VFVGHSIYKGKAALT+EP++P+FSPLDSGAYKL KEGFVLLQFAPA+ VRQYDW+RKQ
Sbjct: 81  PKVFVGHSIYKGKAALTVEPRSPEFSPLDSGAYKLVKEGFVLLQFAPAASVRQYDWTRKQ 140

Query: 563 VFSLSVTEIGTLMGLGAKDSCEFFHDPNKGKSDEGKVRKVLKAEPLPDGSIHFFNLSVQN 384
           VFSLSVTEIG L+ L AK SCEFFHDPNKGKSDEGKVRK+LK EPLPDGS HFFNLSVQN
Sbjct: 141 VFSLSVTEIGHLVSLDAKGSCEFFHDPNKGKSDEGKVRKLLKVEPLPDGSGHFFNLSVQN 200

Query: 383 KLLNVDESIYIPVSKAEFTVLVSAFNYILPFLLGWHAFANSINPEDSSRFNNS--RSGAD 210
           K+LN+DE+IYIPV+KAE+TVL SAFNYILP+LLGWHA+ANSI P+DSSR NN+  R G D
Sbjct: 201 KVLNIDENIYIPVTKAEYTVLTSAFNYILPYLLGWHAYANSIKPDDSSRGNNASPRYGGD 260

Query: 209 LEWSR 195
            EWSR
Sbjct: 261 YEWSR 265


>ref|XP_002277278.1| PREDICTED: uncharacterized protein LOC100253653 [Vitis vinifera]
           gi|296086421|emb|CBI32010.3| unnamed protein product
           [Vitis vinifera]
          Length = 268

 Score =  311 bits (797), Expect = 9e-83
 Identities = 149/185 (80%), Positives = 173/185 (93%), Gaps = 2/185 (1%)
 Frame = -1

Query: 743 PRVFVGHSIYKGKAALTIEPKAPDFSPLDSGAYKLSKEGFVLLQFAPASGVRQYDWSRKQ 564
           PRVFVGHSIYKGKAALT+EPKAP+F+PLDSGA+K+SKEGFVLLQFAPA+GVRQYDW RKQ
Sbjct: 85  PRVFVGHSIYKGKAALTVEPKAPEFTPLDSGAFKVSKEGFVLLQFAPAAGVRQYDWGRKQ 144

Query: 563 VFSLSVTEIGTLMGLGAKDSCEFFHDPNKGKSDEGKVRKVLKAEPLPDGSIHFFNLSVQN 384
           VFSLSVTEIG+L+ LGA++SCEFFHDP KG+S+EGKVRKVLK EPLPDGS HFFNLSVQN
Sbjct: 145 VFSLSVTEIGSLISLGARESCEFFHDPFKGRSEEGKVRKVLKVEPLPDGSGHFFNLSVQN 204

Query: 383 KLLNVDESIYIPVSKAEFTVLVSAFNYILPFLLGWHAFANSINPEDSSRFNNS--RSGAD 210
           KLLN+DE+IYIPV++AEF VL+SAFN+I+P+LLGWHA+ANSI P+D+SR NN+  RSG D
Sbjct: 205 KLLNMDENIYIPVTRAEFAVLISAFNFIVPYLLGWHAYANSIKPDDTSRVNNANPRSG-D 263

Query: 209 LEWSR 195
            EWSR
Sbjct: 264 FEWSR 268


>sp|Q9LL85.1|WHY1_SOLTU RecName: Full=Single-stranded DNA-bindig protein WHY1,
           chloroplastic; AltName: Full=DNA-binding protein p24;
           AltName: Full=PR-10a binding factor 2; Short=PBF-2;
           AltName: Full=Protein WHIRLY 1; Short=StWhy1; Flags:
           Precursor gi|9651810|gb|AAF91282.1|AF233342_1
           DNA-binding protein p24 [Solanum tuberosum]
          Length = 274

 Score =  311 bits (796), Expect = 1e-82
 Identities = 145/185 (78%), Positives = 172/185 (92%), Gaps = 2/185 (1%)
 Frame = -1

Query: 743 PRVFVGHSIYKGKAALTIEPKAPDFSPLDSGAYKLSKEGFVLLQFAPASGVRQYDWSRKQ 564
           P+VFVG+SIYKGKAALT+EP++P+FSPLDSGA+KLS+EG V+LQFAPA+GVRQYDWSRKQ
Sbjct: 90  PKVFVGYSIYKGKAALTVEPRSPEFSPLDSGAFKLSREGMVMLQFAPAAGVRQYDWSRKQ 149

Query: 563 VFSLSVTEIGTLMGLGAKDSCEFFHDPNKGKSDEGKVRKVLKAEPLPDGSIHFFNLSVQN 384
           VFSLSVTEIG+++ LGAKDSCEFFHDPNKG+SDEG+VRKVLK EPLPDGS HFFNLSVQN
Sbjct: 150 VFSLSVTEIGSIISLGAKDSCEFFHDPNKGRSDEGRVRKVLKVEPLPDGSGHFFNLSVQN 209

Query: 383 KLLNVDESIYIPVSKAEFTVLVSAFNYILPFLLGWHAFANSINPEDSSRFNNS--RSGAD 210
           KL+N+DE+IYIPV+KAEF VLVSAFN+++P+LLGWH   NS  PED+SR NN+  RSGA+
Sbjct: 210 KLINLDENIYIPVTKAEFAVLVSAFNFVMPYLLGWHTAVNSFKPEDASRSNNANPRSGAE 269

Query: 209 LEWSR 195
           LEW+R
Sbjct: 270 LEWNR 274


>ref|XP_002520128.1| conserved hypothetical protein [Ricinus communis]
           gi|223540620|gb|EEF42183.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 271

 Score =  309 bits (792), Expect = 3e-82
 Identities = 146/185 (78%), Positives = 168/185 (90%), Gaps = 2/185 (1%)
 Frame = -1

Query: 743 PRVFVGHSIYKGKAALTIEPKAPDFSPLDSGAYKLSKEGFVLLQFAPASGVRQYDWSRKQ 564
           PRV+VGHSIYKGKAALT+EP+AP+F+ LDSGA+K+++EGFVLLQFAPA+GVRQYDWSRKQ
Sbjct: 87  PRVYVGHSIYKGKAALTVEPRAPEFAALDSGAFKVAREGFVLLQFAPAAGVRQYDWSRKQ 146

Query: 563 VFSLSVTEIGTLMGLGAKDSCEFFHDPNKGKSDEGKVRKVLKAEPLPDGSIHFFNLSVQN 384
           VFSLSVTEIGT++ LGA+DSCEFFHDPNKGKSDEGK+RKVLK EPLPDGS HFFNLSVQN
Sbjct: 147 VFSLSVTEIGTIISLGARDSCEFFHDPNKGKSDEGKIRKVLKVEPLPDGSGHFFNLSVQN 206

Query: 383 KLLNVDESIYIPVSKAEFTVLVSAFNYILPFLLGWHAFANSINPEDSSRFNNS--RSGAD 210
           K +N+DESIYIPV+KAEF VL+SAFNYILP+LLGWH FANSI P+ +   NN+  R G D
Sbjct: 207 KPMNMDESIYIPVTKAEFAVLISAFNYILPYLLGWHTFANSIKPDLNGHMNNANPRFGGD 266

Query: 209 LEWSR 195
            EWSR
Sbjct: 267 YEWSR 271


>gb|ADL36850.1| WHY domain class transcription factor [Malus x domestica]
          Length = 276

 Score =  308 bits (790), Expect = 6e-82
 Identities = 148/185 (80%), Positives = 169/185 (91%), Gaps = 2/185 (1%)
 Frame = -1

Query: 743 PRVFVGHSIYKGKAALTIEPKAPDFSPLDSGAYKLSKEGFVLLQFAPASGVRQYDWSRKQ 564
           PR +VGHSIYKGKAALT+EPKAP+F+PLDSGA+KLS+EGFVLLQFAPA+GVR YDWSRKQ
Sbjct: 92  PRFYVGHSIYKGKAALTVEPKAPEFTPLDSGAFKLSREGFVLLQFAPAAGVRVYDWSRKQ 151

Query: 563 VFSLSVTEIGTLMGLGAKDSCEFFHDPNKGKSDEGKVRKVLKAEPLPDGSIHFFNLSVQN 384
           VFSLSVTEIG+L+ LG+K+S EFFHDP KGKSDEGKVRKVLK EPLPDGS HFFNLSVQN
Sbjct: 152 VFSLSVTEIGSLVSLGSKESLEFFHDPFKGKSDEGKVRKVLKVEPLPDGSGHFFNLSVQN 211

Query: 383 KLLNVDESIYIPVSKAEFTVLVSAFNYILPFLLGWHAFANSINPEDSSRFNNS--RSGAD 210
           KL+N+DESIYIP+++AEF VL SAFN+ILP++LGWHA+ANSI PEDSSR NNS  + G D
Sbjct: 212 KLINLDESIYIPITRAEFAVLKSAFNFILPYILGWHAYANSIKPEDSSRANNSGLKYGGD 271

Query: 209 LEWSR 195
            EWSR
Sbjct: 272 FEWSR 276