BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00016809
         (1855 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002268394.1| PREDICTED: cyclin-D1-1 [Vitis vinifera] gi|2...   328   3e-87
ref|XP_003517843.1| PREDICTED: cyclin-D1-1-like [Glycine max]         316   1e-83
ref|XP_003519458.1| PREDICTED: cyclin-D1-1-like [Glycine max]         310   1e-81
ref|XP_004143797.1| PREDICTED: cyclin-D1-1-like [Cucumis sativus...   308   2e-81
ref|XP_003613330.1| Cyclin-D1-1 [Medicago truncatula] gi|3555146...   305   2e-80

>ref|XP_002268394.1| PREDICTED: cyclin-D1-1 [Vitis vinifera] gi|296086502|emb|CBI32091.3|
            unnamed protein product [Vitis vinifera]
          Length = 324

 Score =  328 bits (841), Expect = 3e-87
 Identities = 173/309 (55%), Positives = 215/309 (69%), Gaps = 2/309 (0%)
 Frame = +1

Query: 244  DLLCCEEAEILRDDLPDYYSPNTEFPEDIEESIAGLIEDEGEYMPRFDYQEMFQSQTIDA 423
            DLLC E++ IL  DLP+  S + E P DIEESIAG IEDE  ++P FDY   F+S ++DA
Sbjct: 11   DLLCGEDSSILSGDLPEC-SSDLESPTDIEESIAGFIEDERNFVPGFDYLARFRSHSLDA 69

Query: 424  SARSDSIAWILKVQELYQFQPLTAYLSVNYMDRFLSSRCLPRLPKSNGWLMQLVSVASLS 603
            SAR +S+AWILKVQ  + FQPLTAYLSVNY+DRFL SR   RLP++NGW +QL+SVA LS
Sbjct: 70   SAREESVAWILKVQAYHGFQPLTAYLSVNYLDRFLYSR---RLPQTNGWPLQLLSVACLS 126

Query: 604  LAAKMEEPLVPSLFDIQVEGTQFIFEPKTIRRMEFLILNALDWRLRSITPFDFVSFFAKK 783
            LAAKMEEPLVPSL D+QVEG +FIFE KTIRRME L+L  LDWRLRSITPF F+ FFA K
Sbjct: 127  LAAKMEEPLVPSLLDLQVEGAKFIFESKTIRRMELLVLGVLDWRLRSITPFSFIGFFAYK 186

Query: 784  VESTGTFTRFIASHATQVILIIMRDVNFLHYRPSSIXXXXXXXXXNEYTSISLSNPGVAA 963
            ++S+G+   F+ S ATQ+IL  +++ +FL Y PS I         NE   +SL +P  A 
Sbjct: 187  LDSSGSVIGFLISRATQIILSNIQEASFLEYWPSCIAAAAILCAANEIPKLSLVDPERAE 246

Query: 964  TWCIGLSKEKIVGCYKFIQEVVVDNSPKTPPKEVPQR--WVXXXXXXXXXXXXXXXXXXK 1137
            +WC GLSKEKI+ CY+ +QE+ VDN+ + PPK +PQ    +                  K
Sbjct: 247  SWCDGLSKEKIISCYQLMQEITVDNNRRKPPKLLPQLRVTIRARVRSSGSSSSSSSSSYK 306

Query: 1138 RRKLNNWLW 1164
            RRKLNN LW
Sbjct: 307  RRKLNNCLW 315


>ref|XP_003517843.1| PREDICTED: cyclin-D1-1-like [Glycine max]
          Length = 339

 Score =  316 bits (810), Expect = 1e-83
 Identities = 166/316 (52%), Positives = 211/316 (66%), Gaps = 10/316 (3%)
 Frame = +1

Query: 247  LLCCEEAEILRDDLPDYYSPNTEFPEDIEESIAGLIEDEGEYMPRFDYQEMFQSQTIDAS 426
            LLC E++  + D  P+  S     P    ESIAG +EDE  ++P F+Y   FQS+++DAS
Sbjct: 17   LLCGEDSSGIMDSSPECSSDLDSSPPSEAESIAGFMEDERNFVPGFEYLNRFQSRSLDAS 76

Query: 427  ARSDSIAWILKVQELYQFQPLTAYLSVNYMDRFLSSRCLPRLPKSNGWLMQLVSVASLSL 606
            AR +S+AWILKVQ  Y FQP+TAYLSVNY+DRFL+SR LP  PK+NGW +QL+SVA LSL
Sbjct: 77   AREESVAWILKVQAYYAFQPVTAYLSVNYLDRFLNSRPLP--PKTNGWPLQLLSVACLSL 134

Query: 607  AAKMEEPLVPSLFDIQVEGTQFIFEPKTIRRMEFLILNALDWRLRSITPFDFVSFFAKKV 786
            AAKMEE LVPSL D+QVEG +++FEPKTIRRME L+L  LDWRLRS+TPF F+ FFA K+
Sbjct: 135  AAKMEESLVPSLLDLQVEGAKYVFEPKTIRRMELLVLGVLDWRLRSVTPFSFLDFFACKL 194

Query: 787  ESTGTFTRFIASHATQVILIIMRDVNFLHYRPSSIXXXXXXXXXNEYTSISLSNPGVAAT 966
            +STGTFT F+ S ATQ+IL  +++ +FL Y PS I         NE  + SL  P  A +
Sbjct: 195  DSTGTFTGFLISRATQIILSNIQEASFLAYWPSCIAAAAILHAANEIPNWSLVRPEHAES 254

Query: 967  WCIGLSKEKIVGCYKFIQEVVVDNSPKTPPKEVPQ----------RWVXXXXXXXXXXXX 1116
            WC GL KEKI+GCY+ +QE+V+DN+ + PPK +PQ          R              
Sbjct: 255  WCEGLRKEKIIGCYQLMQELVIDNNQRKPPKVLPQLRVTISRPIMRSSVSSFLASSSSPS 314

Query: 1117 XXXXXXKRRKLNNWLW 1164
                  +RRKLNN LW
Sbjct: 315  SSSLSCRRRKLNNSLW 330


>ref|XP_003519458.1| PREDICTED: cyclin-D1-1-like [Glycine max]
          Length = 339

 Score =  310 bits (793), Expect = 1e-81
 Identities = 165/317 (52%), Positives = 215/317 (67%), Gaps = 11/317 (3%)
 Frame = +1

Query: 247  LLCCEEAEILRDDLPDYYSP-NTEFPEDIE-ESIAGLIEDEGEYMPRFDYQEMFQSQTID 420
            LLC E++  + D  P+  S  ++  P + E ESIAG IEDE  ++P F+Y   FQS+++D
Sbjct: 17   LLCGEDSSGIIDSSPECSSDLDSPPPSEAEAESIAGFIEDERNFVPGFEYLNRFQSRSLD 76

Query: 421  ASARSDSIAWILKVQELYQFQPLTAYLSVNYMDRFLSSRCLPRLPKSNGWLMQLVSVASL 600
            ASAR +S+AWILKVQ  Y FQPLTAYLSVNY+DRFL+SR   +LP++NGW +QL+SVA L
Sbjct: 77   ASAREESVAWILKVQAYYAFQPLTAYLSVNYLDRFLNSR---QLPQTNGWPLQLLSVACL 133

Query: 601  SLAAKMEEPLVPSLFDIQVEGTQFIFEPKTIRRMEFLILNALDWRLRSITPFDFVSFFAK 780
            SLAAKMEEPLVPSL D+QVEG +++FEPKTIRRME L+L  LDWRLRS+TPF F+ FFA 
Sbjct: 134  SLAAKMEEPLVPSLLDLQVEGAKYVFEPKTIRRMELLVLGVLDWRLRSVTPFSFLDFFAC 193

Query: 781  KVESTGTFTRFIASHATQVILIIMRDVNFLHYRPSSIXXXXXXXXXNEYTSISLSNPGVA 960
            K++S+GTFT F+ S ATQ+IL  +++ +FL Y PS I         NE  + S   P  A
Sbjct: 194  KLDSSGTFTGFLISRATQIILSNIQEASFLAYWPSCIAAASILHAANEIPNWSFVRPEHA 253

Query: 961  ATWCIGLSKEKIVGCYKFIQEVVVDNSPKTPPKEVPQ---------RWVXXXXXXXXXXX 1113
             +WC GL KEK++GCY+ +QE+V++N+ + PPK +PQ         R             
Sbjct: 254  ESWCEGLRKEKVIGCYQLMQELVINNNRRKPPKVLPQLRVTSRPIMRSSVSSFSASSSFS 313

Query: 1114 XXXXXXXKRRKLNNWLW 1164
                   KRRKLNN LW
Sbjct: 314  PSSSLSCKRRKLNNSLW 330


>ref|XP_004143797.1| PREDICTED: cyclin-D1-1-like [Cucumis sativus]
            gi|449527605|ref|XP_004170800.1| PREDICTED:
            cyclin-D1-1-like [Cucumis sativus]
          Length = 335

 Score =  308 bits (790), Expect = 2e-81
 Identities = 163/311 (52%), Positives = 210/311 (67%), Gaps = 5/311 (1%)
 Frame = +1

Query: 247  LLCCEEAE-ILRDDLPDYYSPNTEFPEDIEESIAGLIEDEGEYMPRFDYQEMFQSQTIDA 423
            LLC E++  IL  DL +Y S + E P   E+SIA  IEDE  ++P  DY   FQSQ++D+
Sbjct: 15   LLCDEDSSGILSGDLLEY-SSDLESPASSEDSIASFIEDERHFVPGIDYLSRFQSQSLDS 73

Query: 424  SARSDSIAWILKVQELYQFQPLTAYLSVNYMDRFLSSRCLPRLPKSNGWLMQLVSVASLS 603
            SAR+DS+AWILKVQ  Y FQPLTAYLSVNY+DRFL SR   RLP++NGW +QL+SVA LS
Sbjct: 74   SARADSVAWILKVQAYYGFQPLTAYLSVNYLDRFLYSR---RLPETNGWPLQLLSVACLS 130

Query: 604  LAAKMEEPLVPSLFDIQVEGTQFIFEPKTIRRMEFLILNALDWRLRSITPFDFVSFFAKK 783
            LAAKMEEP+VPS  D+Q+EG ++IFEP+TIRRME L+L  L+WRLRS+TPF F+ FFA K
Sbjct: 131  LAAKMEEPIVPSFVDLQIEGAKYIFEPRTIRRMELLVLTTLNWRLRSVTPFSFIGFFAYK 190

Query: 784  VESTGTFTRFIASHATQVILIIMRDVNFLHYRPSSIXXXXXXXXXNEYTSISLSNPGVAA 963
            V+ TGTF+ F+ S +T++IL   RD  FL Y PS I         NE  +++L NP  A 
Sbjct: 191  VDPTGTFSSFLNSRSTEIILSNTRDATFLEYWPSCIAAAALLCAANEIPNLTLLNPEHAQ 250

Query: 964  TWCIGLSKEKIVGCYKFIQEVVVDNSPKTPPKEVPQRWV----XXXXXXXXXXXXXXXXX 1131
            +WC GLSK+KIVGCY+ +Q + +++  +  PK +PQ  V                     
Sbjct: 251  SWCNGLSKDKIVGCYRLMQPLTLESRRRKAPKVIPQLRVRVRAGLRYSDSSSSSSSSRLP 310

Query: 1132 XKRRKLNNWLW 1164
             KRRKLNN +W
Sbjct: 311  FKRRKLNNCVW 321


>ref|XP_003613330.1| Cyclin-D1-1 [Medicago truncatula] gi|355514665|gb|AES96288.1|
            Cyclin-D1-1 [Medicago truncatula]
          Length = 334

 Score =  305 bits (782), Expect = 2e-80
 Identities = 166/315 (52%), Positives = 211/315 (66%), Gaps = 8/315 (2%)
 Frame = +1

Query: 244  DLLCCEE-AEILRDDLP-DYYSPNTEFPEDIEESIAGLIEDEGEYMPRFDYQEMFQSQTI 417
            DLLC EE + IL  D P + +S    +P   +E IAGLIEDEG+++  FDY    +S + 
Sbjct: 13   DLLCGEETSSILSSDSPTESFSDGESYPPPEDEFIAGLIEDEGKFVIGFDYFVKMKSSSF 72

Query: 418  DASARSDSIAWILKVQELYQFQPLTAYLSVNYMDRFLSSRCLPRLPKSNGWLMQLVSVAS 597
            D+ AR +SI WILKVQ  Y FQP+TAYL+VNYMDRFL+SR   RLP++NGW +QL+SVA 
Sbjct: 73   DSDARDESIRWILKVQGYYGFQPVTAYLAVNYMDRFLNSR---RLPQTNGWPLQLLSVAC 129

Query: 598  LSLAAKMEEPLVPSLFDIQVEGTQFIFEPKTIRRMEFLILNALDWRLRSITPFDFVSFFA 777
            LSLAAKMEE LVPSL D+QVEG +++FEP TIRRME L+L+ LDWRLRS+TPF F+SFFA
Sbjct: 130  LSLAAKMEETLVPSLLDLQVEGVKYMFEPITIRRMELLVLSVLDWRLRSVTPFSFLSFFA 189

Query: 778  KKVESTGTFTRFIASHATQVILIIMRDVNFLHYRPSSIXXXXXXXXXNEYTSISLSNPGV 957
             K++ST TFT F+ S ATQ+IL  +++ + L Y PS I         NE  + SL  P  
Sbjct: 190  CKLDSTSTFTGFLISRATQIILSKIQEASILAYWPSCIAAAAILYAANEIPNWSLVEPEH 249

Query: 958  AATWCIGLSKEKIVGCYKFIQEVVVDNSPKTPPKEVPQRWV------XXXXXXXXXXXXX 1119
            A +WC GL KEKI+GCY+ +QE+V+DN+ + PPK +PQ  V                   
Sbjct: 250  AESWCEGLRKEKIIGCYQLMQELVIDNNQRKPPKVLPQMRVTIQPLMRSCVSSSSSSPSS 309

Query: 1120 XXXXXKRRKLNNWLW 1164
                 KRRKLNN LW
Sbjct: 310  SSSSYKRRKLNNCLW 324