BLASTX nr result

ID: Coptis25_contig00016794 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00016794
         (1479 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002316930.1| predicted protein [Populus trichocarpa] gi|1...   456   0.0  
ref|XP_002533709.1| conserved hypothetical protein [Ricinus comm...   463   e-180
ref|XP_003630233.1| hypothetical protein MTR_8g093250 [Medicago ...   444   e-177
ref|XP_004150102.1| PREDICTED: uncharacterized protein YnbB-like...   442   e-167
ref|XP_003634652.1| PREDICTED: LOW QUALITY PROTEIN: uncharacteri...   436   e-159

>ref|XP_002316930.1| predicted protein [Populus trichocarpa] gi|118486085|gb|ABK94886.1|
            unknown [Populus trichocarpa] gi|222859995|gb|EEE97542.1|
            predicted protein [Populus trichocarpa]
          Length = 449

 Score =  456 bits (1174), Expect(2) = 0.0
 Identities = 222/254 (87%), Positives = 237/254 (93%)
 Frame = -2

Query: 1049 VAGAPYDTLEEVIGIRDSHGLGSLKEFGVSYREVPLAEDGGLDWDALTVALKPQTKCALI 870
            VAGAPYDTLEEVIG RDS+GLGSLK+FGV YREVPLAEDGGLDWD L  ALKP TKCALI
Sbjct: 146  VAGAPYDTLEEVIGKRDSNGLGSLKDFGVEYREVPLAEDGGLDWDCLMRALKPHTKCALI 205

Query: 869  QRSCGYSWRQSLSVNEIGRAIKIIKMQNPYCLVMVDNCYGEFVESMEPPMVGADLIAGSL 690
            QRSCGYSWRQSLSVNEIGRAIK+IKMQNP CLVMVDNCYGEFVES+EPP VGADLIAGSL
Sbjct: 206  QRSCGYSWRQSLSVNEIGRAIKMIKMQNPNCLVMVDNCYGEFVESIEPPAVGADLIAGSL 265

Query: 689  IKNPGGTIAPCGGYVAGRENWVKAAAARLSAPGLGTDCGSIPGDIMRTYFQGLFLAPQMV 510
            IKNPGGTIAPCGGY+AG++ WV+AAAARLSAPGLG DCGS PGD+MR YFQGLFL+PQMV
Sbjct: 266  IKNPGGTIAPCGGYIAGKKKWVEAAAARLSAPGLGIDCGSTPGDVMRAYFQGLFLSPQMV 325

Query: 509  GEAIKGSYLIAEVMASKGYKVQPLPRVPRHDTVQAVQLGNRERLLAFCEAVQRRSPVGSF 330
            GEAIKG++LIAEVMASKGYKVQPLPRV RHDTVQAVQLG+RE LLAFCEAVQR SPV S+
Sbjct: 326  GEAIKGAFLIAEVMASKGYKVQPLPRVTRHDTVQAVQLGSRELLLAFCEAVQRSSPVASY 385

Query: 329  IKPVAGSSPGYASE 288
             KPVAGS+PGYASE
Sbjct: 386  TKPVAGSTPGYASE 399



 Score =  207 bits (528), Expect(2) = 0.0
 Identities = 107/145 (73%), Positives = 120/145 (82%), Gaps = 1/145 (0%)
 Frame = -3

Query: 1474 MWVLSCATP-AYPTHILPTTTPKPFLSTYSHSQLSIPIHSHNPFVPEVTEAVDALCSEFR 1298
            MW LSCATP AYP + +  + P   +   S SQ+S   H+ +PFVPEV +AVD+L SEFR
Sbjct: 3    MWTLSCATPVAYPANSVRVSMPS--VKVPSSSQISFQ-HNESPFVPEVVKAVDSLHSEFR 59

Query: 1297 AVDNLVACNTSRVLKAFHNAKLASHHFAGCTGYGHDEVGGREALDGAFAEIVGAESAIVR 1118
            AVDNLVACNTSRVLKAF NA+L SHHF+G TGYGHDE GGREALD AFAEIVGAESA+VR
Sbjct: 60   AVDNLVACNTSRVLKAFQNARLGSHHFSGSTGYGHDEAGGREALDQAFAEIVGAESALVR 119

Query: 1117 AQFFSGTHAITCALFAFLRPGDELL 1043
            +QFFSGTHAITCALFAFLRPGDELL
Sbjct: 120  SQFFSGTHAITCALFAFLRPGDELL 144


>ref|XP_002533709.1| conserved hypothetical protein [Ricinus communis]
            gi|223526383|gb|EEF28672.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 500

 Score =  463 bits (1192), Expect(2) = e-180
 Identities = 225/254 (88%), Positives = 238/254 (93%)
 Frame = -2

Query: 1049 VAGAPYDTLEEVIGIRDSHGLGSLKEFGVSYREVPLAEDGGLDWDALTVALKPQTKCALI 870
            VAG PYDTLEEVIG RDSHGLGSLK+FGV YREVPLAEDGGLDWDAL  ALKP TKCALI
Sbjct: 161  VAGPPYDTLEEVIGKRDSHGLGSLKDFGVKYREVPLAEDGGLDWDALLTALKPDTKCALI 220

Query: 869  QRSCGYSWRQSLSVNEIGRAIKIIKMQNPYCLVMVDNCYGEFVESMEPPMVGADLIAGSL 690
            QRSCGYSWR+SLSVNEIGRAIKIIKMQNP CLVMVDNCYGEFVE +EPPMVGADLIAGSL
Sbjct: 221  QRSCGYSWRRSLSVNEIGRAIKIIKMQNPNCLVMVDNCYGEFVEQIEPPMVGADLIAGSL 280

Query: 689  IKNPGGTIAPCGGYVAGRENWVKAAAARLSAPGLGTDCGSIPGDIMRTYFQGLFLAPQMV 510
            IKNPGGTIAPCGGYVAGR+ WV+AAAARLSAPGLG DCGS PGDIMRTYFQGLFL+PQMV
Sbjct: 281  IKNPGGTIAPCGGYVAGRKKWVEAAAARLSAPGLGIDCGSTPGDIMRTYFQGLFLSPQMV 340

Query: 509  GEAIKGSYLIAEVMASKGYKVQPLPRVPRHDTVQAVQLGNRERLLAFCEAVQRRSPVGSF 330
            GEAIKG++LIAEVMASKGYKVQPLPR+ RHDTVQ VQLG+RERL+AFCEAVQR SPV SF
Sbjct: 341  GEAIKGTFLIAEVMASKGYKVQPLPRLTRHDTVQVVQLGSRERLIAFCEAVQRSSPVSSF 400

Query: 329  IKPVAGSSPGYASE 288
             KPVAG++PGYASE
Sbjct: 401  TKPVAGATPGYASE 414



 Score =  196 bits (498), Expect(2) = e-180
 Identities = 108/163 (66%), Positives = 118/163 (72%), Gaps = 19/163 (11%)
 Frame = -3

Query: 1474 MWVLSCATP-AYPTHILPTTTPKPFLSTYSHSQLSIPIHSHNPFVPE------------- 1337
            MWVLS ATP AYP H L  + P     T+S SQ+S   H  NPFVPE             
Sbjct: 3    MWVLSSATPSAYPAHSLKVSMP-----THSSSQVSFH-HLDNPFVPELNLDMANMKTFSS 56

Query: 1336 -----VTEAVDALCSEFRAVDNLVACNTSRVLKAFHNAKLASHHFAGCTGYGHDEVGGRE 1172
                 V +A+D+L +EFRAVDNLVACNTSRVLKAF NA++ SHHF G TGYGHDE GGRE
Sbjct: 57   GWEKQVAKALDSLYTEFRAVDNLVACNTSRVLKAFQNARVGSHHFGGSTGYGHDEAGGRE 116

Query: 1171 ALDGAFAEIVGAESAIVRAQFFSGTHAITCALFAFLRPGDELL 1043
            ALD AFAEIVGAESAIVR+QFFSGTHAITC LFAFLRPGDELL
Sbjct: 117  ALDQAFAEIVGAESAIVRSQFFSGTHAITCGLFAFLRPGDELL 159


>ref|XP_003630233.1| hypothetical protein MTR_8g093250 [Medicago truncatula]
            gi|355524255|gb|AET04709.1| hypothetical protein
            MTR_8g093250 [Medicago truncatula]
          Length = 448

 Score =  444 bits (1143), Expect(2) = e-177
 Identities = 217/254 (85%), Positives = 237/254 (93%)
 Frame = -2

Query: 1049 VAGAPYDTLEEVIGIRDSHGLGSLKEFGVSYREVPLAEDGGLDWDALTVALKPQTKCALI 870
            VAGAPYDTLEEVIG RDS GLGSL++FGV YREVPLAEDGGLDW+ L  A+KP+TKCALI
Sbjct: 142  VAGAPYDTLEEVIGKRDSGGLGSLQDFGVKYREVPLAEDGGLDWNELMHAVKPETKCALI 201

Query: 869  QRSCGYSWRQSLSVNEIGRAIKIIKMQNPYCLVMVDNCYGEFVESMEPPMVGADLIAGSL 690
            QRSCGYSWRQSLSVN+IGRAIKIIKMQNP C VMVDNCYGE VES+EPPMVGADL+AGSL
Sbjct: 202  QRSCGYSWRQSLSVNDIGRAIKIIKMQNPECSVMVDNCYGELVESIEPPMVGADLMAGSL 261

Query: 689  IKNPGGTIAPCGGYVAGRENWVKAAAARLSAPGLGTDCGSIPGDIMRTYFQGLFLAPQMV 510
            IKNPGGTIAPCGGYVAG++  V+AAAARLSAPGLG DCGS PGDIMR +FQGLFL+PQMV
Sbjct: 262  IKNPGGTIAPCGGYVAGKKKLVEAAAARLSAPGLGVDCGSTPGDIMRAFFQGLFLSPQMV 321

Query: 509  GEAIKGSYLIAEVMASKGYKVQPLPRVPRHDTVQAVQLGNRERLLAFCEAVQRRSPVGSF 330
            GEAIKGS+LIAEV+ASKGYKVQPLPRVPR DTVQAVQLG+RERLLAFCEAVQR SPVGS+
Sbjct: 322  GEAIKGSFLIAEVLASKGYKVQPLPRVPRCDTVQAVQLGSRERLLAFCEAVQRSSPVGSY 381

Query: 329  IKPVAGSSPGYASE 288
             KP+AG++PGYASE
Sbjct: 382  TKPIAGTTPGYASE 395



 Score =  204 bits (520), Expect(2) = e-177
 Identities = 106/144 (73%), Positives = 117/144 (81%)
 Frame = -3

Query: 1474 MWVLSCATPAYPTHILPTTTPKPFLSTYSHSQLSIPIHSHNPFVPEVTEAVDALCSEFRA 1295
            M  ++CA  AYPTH +  + P      Y+ S+ S+PI   NPFVPEV EAVD+L SEFRA
Sbjct: 1    MLSITCAFSAYPTHPVRISIPTTSTIRYA-SRFSVPI---NPFVPEVIEAVDSLNSEFRA 56

Query: 1294 VDNLVACNTSRVLKAFHNAKLASHHFAGCTGYGHDEVGGREALDGAFAEIVGAESAIVRA 1115
            VDNLVA NT+RVLKAFHNA+L SHHF GCTGYGHDE GGREALD AFAEIVGAESAIVR+
Sbjct: 57   VDNLVAYNTTRVLKAFHNARLGSHHFGGCTGYGHDETGGREALDQAFAEIVGAESAIVRS 116

Query: 1114 QFFSGTHAITCALFAFLRPGDELL 1043
            QFFSGTHAITCALFA LRPGDELL
Sbjct: 117  QFFSGTHAITCALFALLRPGDELL 140


>ref|XP_004150102.1| PREDICTED: uncharacterized protein YnbB-like [Cucumis sativus]
          Length = 454

 Score =  442 bits (1136), Expect(2) = e-167
 Identities = 215/254 (84%), Positives = 231/254 (90%)
 Frame = -2

Query: 1049 VAGAPYDTLEEVIGIRDSHGLGSLKEFGVSYREVPLAEDGGLDWDALTVALKPQTKCALI 870
            VAGAPYDTLEEVIG RDS GLGSLK+FGV YREVPLAEDGGLDW+ L  ALKPQTKCALI
Sbjct: 151  VAGAPYDTLEEVIGKRDSQGLGSLKDFGVEYREVPLAEDGGLDWEELARALKPQTKCALI 210

Query: 869  QRSCGYSWRQSLSVNEIGRAIKIIKMQNPYCLVMVDNCYGEFVESMEPPMVGADLIAGSL 690
            QRSCGYSWR+SLSV+EIG+AI++IKMQNP CLVMVDNCYGEFVE+ EPP VGADLIAGSL
Sbjct: 211  QRSCGYSWRRSLSVDEIGKAIRLIKMQNPDCLVMVDNCYGEFVETTEPPTVGADLIAGSL 270

Query: 689  IKNPGGTIAPCGGYVAGRENWVKAAAARLSAPGLGTDCGSIPGDIMRTYFQGLFLAPQMV 510
            IKNPGGT+APCGGY+AGR  WVKAAAARLSAPGLG D GS PGDIMRT+FQGLFL+PQMV
Sbjct: 271  IKNPGGTLAPCGGYIAGRAKWVKAAAARLSAPGLGVDSGSTPGDIMRTFFQGLFLSPQMV 330

Query: 509  GEAIKGSYLIAEVMASKGYKVQPLPRVPRHDTVQAVQLGNRERLLAFCEAVQRRSPVGSF 330
            GEA+KG  LIAEVM SKGYKVQPLPR PRHDTVQAVQLG+RE LLAFCEAVQR SPV SF
Sbjct: 331  GEAVKGMILIAEVMQSKGYKVQPLPRAPRHDTVQAVQLGSREVLLAFCEAVQRSSPVASF 390

Query: 329  IKPVAGSSPGYASE 288
             KPV G++PGYASE
Sbjct: 391  TKPVPGTTPGYASE 404



 Score =  173 bits (439), Expect(2) = e-167
 Identities = 91/149 (61%), Positives = 107/149 (71%), Gaps = 5/149 (3%)
 Frame = -3

Query: 1474 MWVLSCATPAYPTHILPTTTPKPFLSTYSHSQLSIPIH-----SHNPFVPEVTEAVDALC 1310
            MW LS +  ++P+     +   P  +  S + L +  H     S  PF PEV  AVD+L 
Sbjct: 1    MWGLSFSILSHPSPNFTASLLVPAATLRSRTSLPLNFHPKPYTSDTPFSPEVVRAVDSLQ 60

Query: 1309 SEFRAVDNLVACNTSRVLKAFHNAKLASHHFAGCTGYGHDEVGGREALDGAFAEIVGAES 1130
             EFRAVD+LVA N+++VLKAF N +L SHHF G TGYGHDE GGREALD AFAEIVGAES
Sbjct: 61   YEFRAVDDLVARNSAKVLKAFQNVRLGSHHFGGSTGYGHDEAGGREALDNAFAEIVGAES 120

Query: 1129 AIVRAQFFSGTHAITCALFAFLRPGDELL 1043
            A+VR+QFFSGTHAITCALFA LRPGDELL
Sbjct: 121  AMVRSQFFSGTHAITCALFALLRPGDELL 149


>ref|XP_003634652.1| PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein ynbB-like
            [Vitis vinifera]
          Length = 437

 Score =  436 bits (1122), Expect(2) = e-159
 Identities = 216/255 (84%), Positives = 233/255 (91%), Gaps = 1/255 (0%)
 Frame = -2

Query: 1049 VAGAPYDTLEEVIGIRDSHGLGSLKEFGVS-YREVPLAEDGGLDWDALTVALKPQTKCAL 873
            VAG P+DTLEEVIGIRDSHGLGSLK+FGV+ YREVPLAEDGGLDWDAL  ALKPQTKCAL
Sbjct: 133  VAGGPHDTLEEVIGIRDSHGLGSLKDFGVNTYREVPLAEDGGLDWDALMGALKPQTKCAL 192

Query: 872  IQRSCGYSWRQSLSVNEIGRAIKIIKMQNPYCLVMVDNCYGEFVESMEPPMVGADLIAGS 693
            IQRSC YSW +SLS++E  RAIK+IKMQNP CLVMVDNCYGEF E++EPPMVGADLIAGS
Sbjct: 193  IQRSCRYSWCRSLSIDETARAIKMIKMQNPNCLVMVDNCYGEFSENVEPPMVGADLIAGS 252

Query: 692  LIKNPGGTIAPCGGYVAGRENWVKAAAARLSAPGLGTDCGSIPGDIMRTYFQGLFLAPQM 513
            LIKN GGTIAPCGGYVAG+E WVKAAAARLSAPGLG DCGS PGDIM+T+FQGLFL+ QM
Sbjct: 253  LIKNHGGTIAPCGGYVAGKEKWVKAAAARLSAPGLGMDCGSTPGDIMQTFFQGLFLSHQM 312

Query: 512  VGEAIKGSYLIAEVMASKGYKVQPLPRVPRHDTVQAVQLGNRERLLAFCEAVQRRSPVGS 333
            VGEAIKG +LIAEVMASKG+KVQP PRVPRHDTVQAVQLG RE LLAFCEAVQR SPVGS
Sbjct: 313  VGEAIKGGFLIAEVMASKGFKVQPPPRVPRHDTVQAVQLGTRECLLAFCEAVQRSSPVGS 372

Query: 332  FIKPVAGSSPGYASE 288
            F +PV GS+PGYASE
Sbjct: 373  FTRPVVGSTPGYASE 387



 Score =  154 bits (390), Expect(2) = e-159
 Identities = 86/146 (58%), Positives = 101/146 (69%), Gaps = 2/146 (1%)
 Frame = -3

Query: 1474 MWVLSCATPAY--PTHILPTTTPKPFLSTYSHSQLSIPIHSHNPFVPEVTEAVDALCSEF 1301
            M ++S ATPAY  P    P  T KP  + +S                +V +AVD+L SEF
Sbjct: 1    MMMVSYATPAYRVPIPAYPAHTLKPTRAIFSL---------------QVVKAVDSLYSEF 45

Query: 1300 RAVDNLVACNTSRVLKAFHNAKLASHHFAGCTGYGHDEVGGREALDGAFAEIVGAESAIV 1121
            RAVDNLVA NT+RVLKA+ NA++  HHF G TGYGH+E  GREALD AFAEI GAESAI 
Sbjct: 46   RAVDNLVARNTARVLKAYQNARVGYHHFGGSTGYGHEETRGREALDKAFAEIFGAESAIF 105

Query: 1120 RAQFFSGTHAITCALFAFLRPGDELL 1043
            R+Q FSGTHAITCALFAF RPG++LL
Sbjct: 106  RSQVFSGTHAITCALFAFQRPGNQLL 131


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