BLASTX nr result

ID: Coptis25_contig00016788 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00016788
         (564 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002281562.2| PREDICTED: uncharacterized protein LOC100251...   107   2e-21
emb|CBI23663.3| unnamed protein product [Vitis vinifera]              107   2e-21
emb|CAN80688.1| hypothetical protein VITISV_021551 [Vitis vinifera]   106   2e-21
ref|XP_004168400.1| PREDICTED: LOW QUALITY PROTEIN: uncharacteri...   106   3e-21
ref|XP_004147152.1| PREDICTED: uncharacterized protein LOC101205...   103   3e-20

>ref|XP_002281562.2| PREDICTED: uncharacterized protein LOC100251059 [Vitis vinifera]
          Length = 1292

 Score =  107 bits (266), Expect = 2e-21
 Identities = 68/138 (49%), Positives = 84/138 (60%), Gaps = 7/138 (5%)
 Frame = -1

Query: 399  PSQSTLPCQ-TRPQLQPKISPVS---SKFSDSEPGPSSPLQRLRKRAASLGSNASPKITR 232
            P+QS L  Q TR +L  KISP S   SKFSDSEPG SSPLQR   R ASLGS  S K+++
Sbjct: 816  PAQSPLSSQQTRKRLPAKISPSSLKGSKFSDSEPGSSSPLQRYTVRTASLGSGDSQKVSK 875

Query: 231  PSGINSDGRSPSNKAIRSVSLSPDMKKANDVLTPDKKLSLDRVRRLSYPKISNREHASPG 52
            P   ++   S  N+  RSVS  P+ KK N+ LTPD K+S+ R+RRLS PK+S+    S  
Sbjct: 876  PGRTSNGSHSAENRLSRSVSALPEPKKENNGLTPDPKVSMARIRRLSEPKMSSSHQVSSV 935

Query: 51   EKVGAVGVRK---FSEPE 7
            +   A  V K     EPE
Sbjct: 936  KLRSAESVPKPKISDEPE 953



 Score = 59.7 bits (143), Expect = 3e-07
 Identities = 54/179 (30%), Positives = 83/179 (46%), Gaps = 9/179 (5%)
 Frame = -1

Query: 564  QLKTKITQISYKGSKFSDPEPGSVPPVQGLASRTAPVESSASEKITKP--------SILN 409
            +L  KI+  S KGSKFSD EPGS  P+Q    RTA + S  S+K++KP        S  N
Sbjct: 829  RLPAKISPSSLKGSKFSDSEPGSSSPLQRYTVRTASLGSGDSQKVSKPGRTSNGSHSAEN 888

Query: 408  KDSPSQSTLPCQTRPQLQPKISPVSSKFSDSEPGPSSPLQRLRKRAASLGSNASPKITRP 229
            + S S S LP       +PK      + +   P P   + R+R+        + PK++  
Sbjct: 889  RLSRSVSALP-------EPK-----KENNGLTPDPKVSMARIRRL-------SEPKMSSS 929

Query: 228  SGINS-DGRSPSNKAIRSVSLSPDMKKANDVLTPDKKLSLDRVRRLSYPKISNREHASP 55
              ++S   RS  +     +S  P+ KK + +      ++LDR +  + P+I  R    P
Sbjct: 930  HQVSSVKLRSAESVPKPKISDEPESKKISAI------INLDRTKGATLPEIKIRTSKGP 982


>emb|CBI23663.3| unnamed protein product [Vitis vinifera]
          Length = 1216

 Score =  107 bits (266), Expect = 2e-21
 Identities = 68/138 (49%), Positives = 84/138 (60%), Gaps = 7/138 (5%)
 Frame = -1

Query: 399  PSQSTLPCQ-TRPQLQPKISPVS---SKFSDSEPGPSSPLQRLRKRAASLGSNASPKITR 232
            P+QS L  Q TR +L  KISP S   SKFSDSEPG SSPLQR   R ASLGS  S K+++
Sbjct: 740  PAQSPLSSQQTRKRLPAKISPSSLKGSKFSDSEPGSSSPLQRYTVRTASLGSGDSQKVSK 799

Query: 231  PSGINSDGRSPSNKAIRSVSLSPDMKKANDVLTPDKKLSLDRVRRLSYPKISNREHASPG 52
            P   ++   S  N+  RSVS  P+ KK N+ LTPD K+S+ R+RRLS PK+S+    S  
Sbjct: 800  PGRTSNGSHSAENRLSRSVSALPEPKKENNGLTPDPKVSMARIRRLSEPKMSSSHQVSSV 859

Query: 51   EKVGAVGVRK---FSEPE 7
            +   A  V K     EPE
Sbjct: 860  KLRSAESVPKPKISDEPE 877



 Score = 59.7 bits (143), Expect = 3e-07
 Identities = 54/179 (30%), Positives = 83/179 (46%), Gaps = 9/179 (5%)
 Frame = -1

Query: 564  QLKTKITQISYKGSKFSDPEPGSVPPVQGLASRTAPVESSASEKITKP--------SILN 409
            +L  KI+  S KGSKFSD EPGS  P+Q    RTA + S  S+K++KP        S  N
Sbjct: 753  RLPAKISPSSLKGSKFSDSEPGSSSPLQRYTVRTASLGSGDSQKVSKPGRTSNGSHSAEN 812

Query: 408  KDSPSQSTLPCQTRPQLQPKISPVSSKFSDSEPGPSSPLQRLRKRAASLGSNASPKITRP 229
            + S S S LP       +PK      + +   P P   + R+R+        + PK++  
Sbjct: 813  RLSRSVSALP-------EPK-----KENNGLTPDPKVSMARIRRL-------SEPKMSSS 853

Query: 228  SGINS-DGRSPSNKAIRSVSLSPDMKKANDVLTPDKKLSLDRVRRLSYPKISNREHASP 55
              ++S   RS  +     +S  P+ KK + +      ++LDR +  + P+I  R    P
Sbjct: 854  HQVSSVKLRSAESVPKPKISDEPESKKISAI------INLDRTKGATLPEIKIRTSKGP 906


>emb|CAN80688.1| hypothetical protein VITISV_021551 [Vitis vinifera]
          Length = 1351

 Score =  106 bits (265), Expect = 2e-21
 Identities = 67/138 (48%), Positives = 84/138 (60%), Gaps = 7/138 (5%)
 Frame = -1

Query: 399  PSQSTLPCQ-TRPQLQPKISPVS---SKFSDSEPGPSSPLQRLRKRAASLGSNASPKITR 232
            P+QS L  Q TR +L  K+SP S   SKFSDSEPG SSPLQR   R ASLGS  S K+++
Sbjct: 897  PAQSPLSSQQTRKRLPAKVSPSSLKGSKFSDSEPGSSSPLQRYTVRTASLGSGDSQKVSK 956

Query: 231  PSGINSDGRSPSNKAIRSVSLSPDMKKANDVLTPDKKLSLDRVRRLSYPKISNREHASPG 52
            P   ++   S  N+  RSVS  P+ KK N+ LTPD K+S+ R+RRLS PK+S+    S  
Sbjct: 957  PGRTSNGSHSAENRLSRSVSALPEPKKENNGLTPDPKVSMARIRRLSEPKMSSSHQVSSV 1016

Query: 51   EKVGAVGVRK---FSEPE 7
            +   A  V K     EPE
Sbjct: 1017 KLRSAESVPKPKISDEPE 1034



 Score = 59.3 bits (142), Expect = 4e-07
 Identities = 53/179 (29%), Positives = 83/179 (46%), Gaps = 9/179 (5%)
 Frame = -1

Query: 564  QLKTKITQISYKGSKFSDPEPGSVPPVQGLASRTAPVESSASEKITKP--------SILN 409
            +L  K++  S KGSKFSD EPGS  P+Q    RTA + S  S+K++KP        S  N
Sbjct: 910  RLPAKVSPSSLKGSKFSDSEPGSSSPLQRYTVRTASLGSGDSQKVSKPGRTSNGSHSAEN 969

Query: 408  KDSPSQSTLPCQTRPQLQPKISPVSSKFSDSEPGPSSPLQRLRKRAASLGSNASPKITRP 229
            + S S S LP       +PK      + +   P P   + R+R+        + PK++  
Sbjct: 970  RLSRSVSALP-------EPK-----KENNGLTPDPKVSMARIRRL-------SEPKMSSS 1010

Query: 228  SGINS-DGRSPSNKAIRSVSLSPDMKKANDVLTPDKKLSLDRVRRLSYPKISNREHASP 55
              ++S   RS  +     +S  P+ KK + +      ++LDR +  + P+I  R    P
Sbjct: 1011 HQVSSVKLRSAESVPKPKISDEPESKKISAI------INLDRTKGATLPEIKIRTSKGP 1063


>ref|XP_004168400.1| PREDICTED: LOW QUALITY PROTEIN: uncharacterized LOC101205835 [Cucumis
            sativus]
          Length = 1257

 Score =  106 bits (264), Expect = 3e-21
 Identities = 62/122 (50%), Positives = 78/122 (63%), Gaps = 4/122 (3%)
 Frame = -1

Query: 411  NKDSPSQSTLPCQ-TRPQLQPKISPVS---SKFSDSEPGPSSPLQRLRKRAASLGSNASP 244
            N  + +QS+LP Q TR  L  K+SP S   SKFSDS+PGPSSPLQR   R  S+GSN S 
Sbjct: 809  NNSNSAQSSLPSQQTRKLLPTKMSPNSQKGSKFSDSDPGPSSPLQRFPIRTPSIGSNDSN 868

Query: 243  KITRPSGINSDGRSPSNKAIRSVSLSPDMKKANDVLTPDKKLSLDRVRRLSYPKISNREH 64
            K T+PS +N    S  N+ I+SV     +KK N   T DKK+S+ R+RRLS PK+S   H
Sbjct: 869  KTTKPSRLNGGNHSAGNRLIQSVPSLTKLKKENSDATNDKKVSMARIRRLSEPKMSISNH 928

Query: 63   AS 58
            +S
Sbjct: 929  SS 930



 Score = 64.7 bits (156), Expect = 1e-08
 Identities = 51/174 (29%), Positives = 85/174 (48%)
 Frame = -1

Query: 561  LKTKITQISYKGSKFSDPEPGSVPPVQGLASRTAPVESSASEKITKPSILNKDSPSQSTL 382
            L TK++  S KGSKFSD +PG   P+Q    RT  + S+ S K TKPS LN  + S    
Sbjct: 827  LPTKMSPNSQKGSKFSDSDPGPSSPLQRFPIRTPSIGSNDSNKTTKPSRLNGGNHSAGNR 886

Query: 381  PCQTRPQLQPKISPVSSKFSDSEPGPSSPLQRLRKRAASLGSNASPKITRPSGINSDGRS 202
              Q+ P L  K+   +S  ++ +    + ++RL +   S+ +++S   TR +        
Sbjct: 887  LIQSVPSL-TKLKKENSDATNDKKVSMARIRRLSEPKMSISNHSSSTKTRST-------E 938

Query: 201  PSNKAIRSVSLSPDMKKANDVLTPDKKLSLDRVRRLSYPKISNREHASPGEKVG 40
            P+ KA   V+   + KK    +     ++LD+ +  + P++  R    PG  +G
Sbjct: 939  PAIKA--KVTNETESKKKISAI-----MNLDKSKAATLPELKIRTTKGPGATIG 985


>ref|XP_004147152.1| PREDICTED: uncharacterized protein LOC101205835 [Cucumis sativus]
          Length = 1303

 Score =  103 bits (256), Expect = 3e-20
 Identities = 61/122 (50%), Positives = 77/122 (63%), Gaps = 4/122 (3%)
 Frame = -1

Query: 411  NKDSPSQSTLPCQ-TRPQLQPKISPVS---SKFSDSEPGPSSPLQRLRKRAASLGSNASP 244
            N  + +QS+LP Q TR  L  K+SP S   SKFSDS+PG SSPLQR   R  S+GSN S 
Sbjct: 855  NNSNSAQSSLPSQQTRKLLPTKMSPNSQKGSKFSDSDPGASSPLQRFPIRTPSIGSNDSN 914

Query: 243  KITRPSGINSDGRSPSNKAIRSVSLSPDMKKANDVLTPDKKLSLDRVRRLSYPKISNREH 64
            K T+PS +N    S  N+ I+SV     +KK N   T DKK+S+ R+RRLS PK+S   H
Sbjct: 915  KTTKPSRLNGGNHSAGNRLIQSVPSLTKLKKENSDATNDKKVSMARIRRLSEPKMSISNH 974

Query: 63   AS 58
            +S
Sbjct: 975  SS 976



 Score = 65.5 bits (158), Expect = 6e-09
 Identities = 51/174 (29%), Positives = 86/174 (49%)
 Frame = -1

Query: 561  LKTKITQISYKGSKFSDPEPGSVPPVQGLASRTAPVESSASEKITKPSILNKDSPSQSTL 382
            L TK++  S KGSKFSD +PG+  P+Q    RT  + S+ S K TKPS LN  + S    
Sbjct: 873  LPTKMSPNSQKGSKFSDSDPGASSPLQRFPIRTPSIGSNDSNKTTKPSRLNGGNHSAGNR 932

Query: 381  PCQTRPQLQPKISPVSSKFSDSEPGPSSPLQRLRKRAASLGSNASPKITRPSGINSDGRS 202
              Q+ P L  K+   +S  ++ +    + ++RL +   S+ +++S   TR +        
Sbjct: 933  LIQSVPSL-TKLKKENSDATNDKKVSMARIRRLSEPKMSISNHSSSTKTRST-------E 984

Query: 201  PSNKAIRSVSLSPDMKKANDVLTPDKKLSLDRVRRLSYPKISNREHASPGEKVG 40
            P+ KA   V+   + KK    +     ++LD+ +  + P++  R    PG  +G
Sbjct: 985  PAIKA--KVTNETESKKKISAI-----MNLDKSKAATLPELKIRTTKGPGATIG 1031


Top