BLASTX nr result

ID: Coptis25_contig00016757 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00016757
         (203 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003614409.1| Protein CHUP1 [Medicago truncatula] gi|35551...   120   9e-26
ref|XP_002281154.2| PREDICTED: protein CHUP1, chloroplastic-like...   119   3e-25
emb|CBI27077.3| unnamed protein product [Vitis vinifera]              119   3e-25
gb|ACJ86222.1| unknown [Medicago truncatula]                          119   3e-25
ref|XP_002524394.1| conserved hypothetical protein [Ricinus comm...   117   1e-24

>ref|XP_003614409.1| Protein CHUP1 [Medicago truncatula] gi|355515744|gb|AES97367.1|
            Protein CHUP1 [Medicago truncatula]
          Length = 997

 Score =  120 bits (302), Expect = 9e-26
 Identities = 59/67 (88%), Positives = 63/67 (94%)
 Frame = -3

Query: 201  YREFGIPVDWLQDSGVVGKIKLSSVQLARKYMMRVASELDALSGAEKETVREFLLLQGVR 22
            YREFGIP++WLQD+GVVGKIKLSSVQLARKYM RVASELDALSG EKE  REFL+LQGVR
Sbjct: 893  YREFGIPINWLQDAGVVGKIKLSSVQLARKYMKRVASELDALSGPEKEPAREFLILQGVR 952

Query: 21   FAFRVHQ 1
            FAFRVHQ
Sbjct: 953  FAFRVHQ 959


>ref|XP_002281154.2| PREDICTED: protein CHUP1, chloroplastic-like [Vitis vinifera]
          Length = 1003

 Score =  119 bits (298), Expect = 3e-25
 Identities = 60/67 (89%), Positives = 62/67 (92%)
 Frame = -3

Query: 201  YREFGIPVDWLQDSGVVGKIKLSSVQLARKYMMRVASELDALSGAEKETVREFLLLQGVR 22
            YREFGIPVDWL DSGVVGKIKLSSVQLARKYM RV+SELDALSG EKE  REFL+LQGVR
Sbjct: 905  YREFGIPVDWLLDSGVVGKIKLSSVQLARKYMKRVSSELDALSGPEKEPNREFLILQGVR 964

Query: 21   FAFRVHQ 1
            FAFRVHQ
Sbjct: 965  FAFRVHQ 971


>emb|CBI27077.3| unnamed protein product [Vitis vinifera]
          Length = 969

 Score =  119 bits (298), Expect = 3e-25
 Identities = 60/67 (89%), Positives = 62/67 (92%)
 Frame = -3

Query: 201  YREFGIPVDWLQDSGVVGKIKLSSVQLARKYMMRVASELDALSGAEKETVREFLLLQGVR 22
            YREFGIPVDWL DSGVVGKIKLSSVQLARKYM RV+SELDALSG EKE  REFL+LQGVR
Sbjct: 871  YREFGIPVDWLLDSGVVGKIKLSSVQLARKYMKRVSSELDALSGPEKEPNREFLILQGVR 930

Query: 21   FAFRVHQ 1
            FAFRVHQ
Sbjct: 931  FAFRVHQ 937


>gb|ACJ86222.1| unknown [Medicago truncatula]
          Length = 268

 Score =  119 bits (298), Expect = 3e-25
 Identities = 58/67 (86%), Positives = 62/67 (92%)
 Frame = -3

Query: 201 YREFGIPVDWLQDSGVVGKIKLSSVQLARKYMMRVASELDALSGAEKETVREFLLLQGVR 22
           YREFGIP++WLQD+GVVGKIKLSSVQL RKYM RVASELDALSG EKE  REFL+LQGVR
Sbjct: 164 YREFGIPINWLQDAGVVGKIKLSSVQLVRKYMKRVASELDALSGPEKEPAREFLILQGVR 223

Query: 21  FAFRVHQ 1
           FAFRVHQ
Sbjct: 224 FAFRVHQ 230


>ref|XP_002524394.1| conserved hypothetical protein [Ricinus communis]
            gi|223536355|gb|EEF38005.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 998

 Score =  117 bits (292), Expect = 1e-24
 Identities = 58/67 (86%), Positives = 62/67 (92%)
 Frame = -3

Query: 201  YREFGIPVDWLQDSGVVGKIKLSSVQLARKYMMRVASELDALSGAEKETVREFLLLQGVR 22
            YREFGIP++WL DSGVVGKIKLSSVQLA+KYM RVASELDA+SG EKE  REFLLLQGVR
Sbjct: 899  YREFGIPINWLLDSGVVGKIKLSSVQLAKKYMKRVASELDAMSGPEKEPNREFLLLQGVR 958

Query: 21   FAFRVHQ 1
            FAFRVHQ
Sbjct: 959  FAFRVHQ 965


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