BLASTX nr result

ID: Coptis25_contig00016746 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00016746
         (597 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002305650.1| predicted protein [Populus trichocarpa] gi|2...   151   9e-35
ref|XP_002316665.1| predicted protein [Populus trichocarpa] gi|2...   149   4e-34
ref|XP_002270292.2| PREDICTED: vacuolar protein 8-like [Vitis vi...   148   8e-34
ref|XP_003532561.1| PREDICTED: uncharacterized protein LOC100809...   147   2e-33
ref|XP_003529292.1| PREDICTED: uncharacterized protein LOC100809...   145   4e-33

>ref|XP_002305650.1| predicted protein [Populus trichocarpa] gi|222848614|gb|EEE86161.1|
           predicted protein [Populus trichocarpa]
          Length = 575

 Score =  151 bits (381), Expect = 9e-35
 Identities = 82/162 (50%), Positives = 108/162 (66%)
 Frame = -2

Query: 596 YGFXXXXXXXXXXXXXSIQELAVKATFRLSNTSEELRKAMGDKDFMSELMQMLGAISIXX 417
           YGF              +QELA+KA FRLS TSEE +KAMGD  FMSE ++ L A S   
Sbjct: 409 YGFMDQLLFFLRNGDVLVQELALKAAFRLSGTSEETKKAMGDAGFMSEFVKFLDAKSFEV 468

Query: 416 XXXXXXXXASMLCVKKNRRKFLHDDFSVGRILQLLEPDEGGSSNKRFLLSIILSLTSCHS 237
                    S++ V KNR+ F+ DD +VG +LQLL+ +E  S +K+FL+SI+LSLTSC+S
Sbjct: 469 REMAAVALNSLVSVPKNRKIFVQDDRNVGFLLQLLDQEETNSGSKKFLISILLSLTSCNS 528

Query: 236 GRRKILNSIYLTNLEKLADAGVIDAKRIRKNLRINRFRSIVS 111
           GR+KI NS YL N+EKLA+A V DAKR+ + L  NRFRS+++
Sbjct: 529 GRKKIANSGYLKNIEKLAEAEVSDAKRLVRKLSTNRFRSMLN 570


>ref|XP_002316665.1| predicted protein [Populus trichocarpa] gi|222859730|gb|EEE97277.1|
           predicted protein [Populus trichocarpa]
          Length = 557

 Score =  149 bits (376), Expect = 4e-34
 Identities = 81/164 (49%), Positives = 111/164 (67%)
 Frame = -2

Query: 596 YGFXXXXXXXXXXXXXSIQELAVKATFRLSNTSEELRKAMGDKDFMSELMQMLGAISIXX 417
           YGF             S+QELA+KA FRL   SEE +KAMGD  FMSEL++ L A S   
Sbjct: 391 YGFMDQLLFFLRNGDVSVQELALKAAFRLCGKSEETKKAMGDAGFMSELVKFLDAKSFEV 450

Query: 416 XXXXXXXXASMLCVKKNRRKFLHDDFSVGRILQLLEPDEGGSSNKRFLLSIILSLTSCHS 237
                   +S++ V KNR++F+ DD +VG +LQLL+ +E  S +K+ L+SI+LSLTSC+S
Sbjct: 451 REMAAVALSSLVSVPKNRKRFVQDDRNVGFLLQLLDQEEANSGSKKLLISILLSLTSCNS 510

Query: 236 GRRKILNSIYLTNLEKLADAGVIDAKRIRKNLRINRFRSIVSML 105
           GR+KI +S YL N+EKLA+A V DAKR+ + L  NRFRSI++++
Sbjct: 511 GRKKIASSGYLKNIEKLAEAEVSDAKRLVRKLSTNRFRSILNVI 554


>ref|XP_002270292.2| PREDICTED: vacuolar protein 8-like [Vitis vinifera]
          Length = 579

 Score =  148 bits (373), Expect = 8e-34
 Identities = 75/145 (51%), Positives = 107/145 (73%)
 Frame = -2

Query: 545 IQELAVKATFRLSNTSEELRKAMGDKDFMSELMQMLGAISIXXXXXXXXXXASMLCVKKN 366
           +QELA+K +FRL  +SEE +K+MGD  F+ EL+++L A S           +SM+ V +N
Sbjct: 430 VQELALKVSFRLCGSSEEAKKSMGDAGFIPELIRLLHAKSFEIREMAAEALSSMVLVSRN 489

Query: 365 RRKFLHDDFSVGRILQLLEPDEGGSSNKRFLLSIILSLTSCHSGRRKILNSIYLTNLEKL 186
           RRK + +D ++G +LQLLE +EG S N++FLLSI++SLTSC+SGR+KI+NS Y+ N+EKL
Sbjct: 490 RRKLVQEDGNIGMLLQLLESEEGNSGNRKFLLSILMSLTSCNSGRKKIVNSGYMKNIEKL 549

Query: 185 ADAGVIDAKRIRKNLRINRFRSIVS 111
           A+A V DAKRI K L  NR R+++S
Sbjct: 550 AEADVSDAKRIVKKLSTNRLRTMLS 574


>ref|XP_003532561.1| PREDICTED: uncharacterized protein LOC100809062 [Glycine max]
          Length = 566

 Score =  147 bits (370), Expect = 2e-33
 Identities = 81/163 (49%), Positives = 107/163 (65%), Gaps = 1/163 (0%)
 Frame = -2

Query: 596 YGFXXXXXXXXXXXXXSIQELAVKATFRLSNTSEELRKAMGDKDFMSELMQMLGAISIXX 417
           YGF             SIQELA+K  FRL  TSEE +KAMGD  FM E ++ L A S   
Sbjct: 399 YGFVDQLIYYVRNGEVSIQELALKVAFRLCGTSEEAKKAMGDARFMPEFVKFLNAKSFEV 458

Query: 416 XXXXXXXXASMLCVKKNRRKFLHDDFSVGRILQLLEPDEGGSSNKRFLLSIILSLTSCHS 237
                   + M+ V +NR++F+ DD ++  ILQLL+P+EG S NK+FL+SI++SLT+C S
Sbjct: 459 REMAAEALSGMVMVPRNRKRFVQDDHNIALILQLLDPEEGNSGNKKFLISILMSLTNCTS 518

Query: 236 GRRKILNSIYLTNLEKLADAGV-IDAKRIRKNLRINRFRSIVS 111
           GR+KI++S Y  N+EKLADA V  DAKR+ K L  NRFRS++S
Sbjct: 519 GRKKIVSSGYAKNIEKLADAEVSSDAKRLVKKLSTNRFRSMLS 561


>ref|XP_003529292.1| PREDICTED: uncharacterized protein LOC100809382 [Glycine max]
          Length = 567

 Score =  145 bits (367), Expect = 4e-33
 Identities = 77/146 (52%), Positives = 103/146 (70%), Gaps = 1/146 (0%)
 Frame = -2

Query: 545 IQELAVKATFRLSNTSEELRKAMGDKDFMSELMQMLGAISIXXXXXXXXXXASMLCVKKN 366
           IQELA+K  FRL  TSEE +KAMGD  FM E ++ L A S           + M+ V +N
Sbjct: 417 IQELALKVAFRLCGTSEEAKKAMGDAGFMPEFVKFLNAKSFEVREMAAEALSGMVIVPRN 476

Query: 365 RRKFLHDDFSVGRILQLLEPDEGGSSNKRFLLSIILSLTSCHSGRRKILNSIYLTNLEKL 186
           R++F+ DD ++  +LQLL+P+EG S NK+FL+SI++SLTSC SGR+KI++S Y  N+EKL
Sbjct: 477 RKRFVQDDHNIALLLQLLDPEEGNSGNKKFLISILMSLTSCTSGRKKIVSSGYAKNIEKL 536

Query: 185 ADAGV-IDAKRIRKNLRINRFRSIVS 111
           ADA V  DAKR+ K L  NRFRS++S
Sbjct: 537 ADAEVSSDAKRLVKKLSTNRFRSMLS 562


Top