BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00016738
         (224 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN69338.1| hypothetical protein VITISV_032632 [Vitis vinifera]    88   8e-16
ref|XP_002263693.2| PREDICTED: putative pentatricopeptide repeat...    87   1e-15
ref|XP_002263209.1| PREDICTED: putative pentatricopeptide repeat...    87   1e-15
emb|CBI34156.3| unnamed protein product [Vitis vinifera]               87   1e-15
ref|XP_002263091.1| PREDICTED: putative pentatricopeptide repeat...    87   1e-15

>emb|CAN69338.1| hypothetical protein VITISV_032632 [Vitis vinifera]
          Length = 585

 Score = 87.8 bits (216), Expect = 8e-16
 Identities = 38/73 (52%), Positives = 55/73 (75%)
 Frame = +2

Query: 5   FGFAILASILKRGFEPNVVTLTTLLKGLCVEGKVADAMDLFTRMLENGYPCNEVSYGTVM 184
           F F++LA ILK G +P+  T TTL++GLCVEGK+ DA+ LF +M+  G+  N V+YGT++
Sbjct: 120 FAFSVLAKILKLGLQPDTATFTTLIRGLCVEGKIGDALHLFDKMIGEGFQPNVVTYGTLI 179

Query: 185 NGICKSLNSTAAL 223
           NG+CK  N+ AA+
Sbjct: 180 NGLCKVGNTNAAI 192



 Score = 59.7 bits (143), Expect = 2e-07
 Identities = 25/61 (40%), Positives = 41/61 (67%)
 Frame = +2

Query: 17  ILASILKRGFEPNVVTLTTLLKGLCVEGKVADAMDLFTRMLENGYPCNEVSYGTVMNGIC 196
           ++  ++ RG EPNVVT   L+ G C++ ++ +A+ +F  M+ NGY  N +SY T++NG C
Sbjct: 299 VVDMMIIRGVEPNVVTYNALMDGHCLQSEMDEAVKVFDTMVHNGYAPNVISYNTLINGYC 358

Query: 197 K 199
           K
Sbjct: 359 K 359


>ref|XP_002263693.2| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Vitis vinifera]
          Length = 586

 Score = 87.4 bits (215), Expect = 1e-15
 Identities = 38/73 (52%), Positives = 55/73 (75%)
 Frame = +2

Query: 5   FGFAILASILKRGFEPNVVTLTTLLKGLCVEGKVADAMDLFTRMLENGYPCNEVSYGTVM 184
           F F++LA ILK G +P+  T TTL++GLCVEGK+ DA+ LF +M+  G+  N V+YGT++
Sbjct: 122 FAFSVLAKILKLGHQPDTATFTTLIRGLCVEGKIGDALHLFDKMIGEGFQPNVVTYGTLI 181

Query: 185 NGICKSLNSTAAL 223
           NG+CK  N+ AA+
Sbjct: 182 NGLCKVGNTNAAI 194



 Score = 59.7 bits (143), Expect = 2e-07
 Identities = 25/61 (40%), Positives = 41/61 (67%)
 Frame = +2

Query: 17  ILASILKRGFEPNVVTLTTLLKGLCVEGKVADAMDLFTRMLENGYPCNEVSYGTVMNGIC 196
           ++  ++ RG EPNVVT   L+ G C++ ++ +A+ +F  M+ NGY  N +SY T++NG C
Sbjct: 301 VVDMMIIRGVEPNVVTYNALMDGHCLQSEMDEAVKVFDTMVHNGYAPNVISYNTLINGYC 360

Query: 197 K 199
           K
Sbjct: 361 K 361


>ref|XP_002263209.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Vitis vinifera]
          Length = 592

 Score = 87.4 bits (215), Expect = 1e-15
 Identities = 38/74 (51%), Positives = 56/74 (75%)
 Frame = +2

Query: 2   DFGFAILASILKRGFEPNVVTLTTLLKGLCVEGKVADAMDLFTRMLENGYPCNEVSYGTV 181
           DFGF++LA I K G +P+  T TTL++GLCVEGK+ +A+ LF +M+  G+  N V+YGT+
Sbjct: 126 DFGFSVLAKIFKLGHQPDTATFTTLIRGLCVEGKIGEALHLFDKMVGEGFQPNGVTYGTL 185

Query: 182 MNGICKSLNSTAAL 223
           ++G+CK  NS AA+
Sbjct: 186 IHGLCKVGNSRAAI 199


>emb|CBI34156.3| unnamed protein product [Vitis vinifera]
          Length = 442

 Score = 87.0 bits (214), Expect = 1e-15
 Identities = 37/73 (50%), Positives = 57/73 (78%)
 Frame = +2

Query: 5   FGFAILASILKRGFEPNVVTLTTLLKGLCVEGKVADAMDLFTRMLENGYPCNEVSYGTVM 184
           F F++LA ILK G +P+  T TTL++GLCVEGK+ +A+ LF +M++ G+  N V+YGT++
Sbjct: 98  FAFSVLAKILKLGHQPDPTTFTTLIRGLCVEGKIGEALHLFDKMIDEGFQPNVVTYGTLI 157

Query: 185 NGICKSLNSTAAL 223
           NG+CK  N++AA+
Sbjct: 158 NGLCKVGNTSAAI 170


>ref|XP_002263091.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Vitis vinifera]
          Length = 588

 Score = 87.0 bits (214), Expect = 1e-15
 Identities = 38/74 (51%), Positives = 56/74 (75%)
 Frame = +2

Query: 2   DFGFAILASILKRGFEPNVVTLTTLLKGLCVEGKVADAMDLFTRMLENGYPCNEVSYGTV 181
           DF F+ LA ILK G +P+  T TTL++GLCVEGK+ +A+ LF +M+  G+  N V+YGT+
Sbjct: 122 DFAFSALAKILKLGHQPDATTFTTLIRGLCVEGKIGEALHLFDKMIGEGFQPNVVTYGTL 181

Query: 182 MNGICKSLNSTAAL 223
           +NG+CK  N++AA+
Sbjct: 182 INGLCKVGNTSAAI 195