BLASTX nr result

ID: Coptis25_contig00016733 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00016733
         (1143 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003635085.1| PREDICTED: thioredoxin-like protein HCF164, ...   331   2e-88
ref|XP_003517272.1| PREDICTED: thioredoxin-like protein HCF164, ...   325   1e-86
ref|XP_002310771.1| predicted protein [Populus trichocarpa] gi|2...   318   2e-84
ref|XP_002522379.1| Thiol:disulfide interchange protein txlA, pu...   318   2e-84
ref|XP_004141943.1| PREDICTED: thioredoxin-like protein HCF164, ...   316   6e-84

>ref|XP_003635085.1| PREDICTED: thioredoxin-like protein HCF164, chloroplastic-like [Vitis
            vinifera] gi|298205068|emb|CBI38364.3| unnamed protein
            product [Vitis vinifera]
          Length = 264

 Score =  331 bits (849), Expect = 2e-88
 Identities = 170/262 (64%), Positives = 196/262 (74%), Gaps = 2/262 (0%)
 Frame = -3

Query: 1072 MARVLSNPINLNRFQPSFQASFPRRRSASLPRQKN-IGGFRGNKLVCQTXXXXXXXXXXX 896
            M+RV S+P+ L+RF+P  QAS PR    +  +  N +  F+   + CQT           
Sbjct: 1    MSRVASSPVGLHRFRPCLQASQPRHVFKTHVQSPNRVTRFQNIAIACQTTPNPTPTDSST 60

Query: 895  XXPVSV-PDXXXXXXXXXXXXXXNAGSIEFPNRSINRKIALASTFAAVGLFLSTRLDFGV 719
                 V P               + G  EFP++ INR+IA+ S+ AAVGLFLS RLDFGV
Sbjct: 61   TEKPPVEPGSVNDNVTQAASSSTDPGLPEFPSKDINRRIAVVSSLAAVGLFLSKRLDFGV 120

Query: 718  SLKDLSVAALPYEEALSNGRPTVVEFYADWCEVCRELAPDVYKVEQQYKDRVNFVMLNVD 539
            SLKDLS AALPYEEALSNG+PTVVEFYADWCEVCRELAPDVYKVEQQY+DRVNFVMLNVD
Sbjct: 121  SLKDLSAAALPYEEALSNGKPTVVEFYADWCEVCRELAPDVYKVEQQYRDRVNFVMLNVD 180

Query: 538  NTKWEQELDEFGVEGIPHFTFLDKEGNEEGNVVGRLPRKYLLENVDALAQGKASVPHARA 359
            NTKWEQELDEFGVEGIPHF FLDKEGNEEGNVVGRLP++Y  ENV+ALA G+AS+PHAR 
Sbjct: 181  NTKWEQELDEFGVEGIPHFAFLDKEGNEEGNVVGRLPKQYFQENVEALAHGEASIPHARV 240

Query: 358  VGQYTSAEARKVHRVTDPRSHG 293
            VGQY+SAE+RKVH+V DPRSHG
Sbjct: 241  VGQYSSAESRKVHQVVDPRSHG 262


>ref|XP_003517272.1| PREDICTED: thioredoxin-like protein HCF164, chloroplastic-like
            [Glycine max]
          Length = 252

 Score =  325 bits (834), Expect = 1e-86
 Identities = 174/262 (66%), Positives = 194/262 (74%), Gaps = 2/262 (0%)
 Frame = -3

Query: 1072 MARVLS-NPINLNRFQPSFQASFPRRRSASLPRQKNIGGFRGNKLVCQTXXXXXXXXXXX 896
            MAR++S NPI L+RFQP    S  R  SA+  R++     +   L CQT           
Sbjct: 1    MARLISSNPIALHRFQPCLPIS--RHFSANPRRRRPTNTRKLQTLACQTNPNLDQK---- 54

Query: 895  XXPVSVPDXXXXXXXXXXXXXXNAGSI-EFPNRSINRKIALASTFAAVGLFLSTRLDFGV 719
                  P                  S+ + P ++IN KIAL ST AA+GLFLS RLDFGV
Sbjct: 55   ----DTPTTDEEKLVVEPSTSTTTSSLPQLPTKNINNKIALVSTLAALGLFLSARLDFGV 110

Query: 718  SLKDLSVAALPYEEALSNGRPTVVEFYADWCEVCRELAPDVYKVEQQYKDRVNFVMLNVD 539
            SLKDLS  A+PYEEALSNG+PTVVEFYADWCEVCRELAPDVYKVEQQ+KDRVNFVMLNVD
Sbjct: 111  SLKDLSANAMPYEEALSNGKPTVVEFYADWCEVCRELAPDVYKVEQQFKDRVNFVMLNVD 170

Query: 538  NTKWEQELDEFGVEGIPHFTFLDKEGNEEGNVVGRLPRKYLLENVDALAQGKASVPHARA 359
            NTKWEQELDEFGVEGIPHF FLDKEGNEEGNVVGRLPR+YLLENVDALA+G+ASVPHAR 
Sbjct: 171  NTKWEQELDEFGVEGIPHFAFLDKEGNEEGNVVGRLPRQYLLENVDALARGEASVPHARV 230

Query: 358  VGQYTSAEARKVHRVTDPRSHG 293
            VGQY+SAEARKVH+V DPRSHG
Sbjct: 231  VGQYSSAEARKVHQVADPRSHG 252


>ref|XP_002310771.1| predicted protein [Populus trichocarpa] gi|222853674|gb|EEE91221.1|
            predicted protein [Populus trichocarpa]
          Length = 260

 Score =  318 bits (815), Expect = 2e-84
 Identities = 170/263 (64%), Positives = 193/263 (73%), Gaps = 3/263 (1%)
 Frame = -3

Query: 1072 MARVLSNPINLNRFQPSFQASF--PRRRSASLPRQKNIGGFRGNKLVCQTXXXXXXXXXX 899
            MARV SNP+ ++RF+P  QAS   P    +++  Q     F    + CQT          
Sbjct: 1    MARVASNPLCIHRFRPYLQASHSSPSLLKSTVHYQTKPRKFPA--VSCQTNPDSSETSTP 58

Query: 898  XXXPVSVPDXXXXXXXXXXXXXXN-AGSIEFPNRSINRKIALASTFAAVGLFLSTRLDFG 722
                V  P                 +G  EFPN+ +N++IA+ S  AA GLFLS+RLDFG
Sbjct: 59   TEKEVLEPGPVSDDTKREDTGASQDSGLPEFPNKDVNKRIAVVSLLAAAGLFLSSRLDFG 118

Query: 721  VSLKDLSVAALPYEEALSNGRPTVVEFYADWCEVCRELAPDVYKVEQQYKDRVNFVMLNV 542
            VSLKDLSVAALPYEEALSNG+PTVVEFYADWCEVCRELAPDVYKVEQQYKDRVNFVMLNV
Sbjct: 119  VSLKDLSVAALPYEEALSNGKPTVVEFYADWCEVCRELAPDVYKVEQQYKDRVNFVMLNV 178

Query: 541  DNTKWEQELDEFGVEGIPHFTFLDKEGNEEGNVVGRLPRKYLLENVDALAQGKASVPHAR 362
            DNTKWEQELDEFGVEGIPHF FLD+EGNEEGNVVGRLPRKYLLENV+ALA+G+ S+PHAR
Sbjct: 179  DNTKWEQELDEFGVEGIPHFAFLDREGNEEGNVVGRLPRKYLLENVEALARGEGSIPHAR 238

Query: 361  AVGQYTSAEARKVHRVTDPRSHG 293
             VGQY++AE RKV R  DPRSHG
Sbjct: 239  VVGQYSNAENRKV-RSVDPRSHG 260


>ref|XP_002522379.1| Thiol:disulfide interchange protein txlA, putative [Ricinus
           communis] gi|223538457|gb|EEF40063.1| Thiol:disulfide
           interchange protein txlA, putative [Ricinus communis]
          Length = 206

 Score =  318 bits (814), Expect = 2e-84
 Identities = 151/178 (84%), Positives = 165/178 (92%)
 Frame = -3

Query: 826 AGSIEFPNRSINRKIALASTFAAVGLFLSTRLDFGVSLKDLSVAALPYEEALSNGRPTVV 647
           +G  EFPN+ +N++I + S  AAVGLFLS RLDFGVSLKDLS AA+PYEEALSNG+PTVV
Sbjct: 29  SGLPEFPNKDVNKQIGVISVLAAVGLFLSARLDFGVSLKDLSAAAVPYEEALSNGKPTVV 88

Query: 646 EFYADWCEVCRELAPDVYKVEQQYKDRVNFVMLNVDNTKWEQELDEFGVEGIPHFTFLDK 467
           EFYADWCEVCRELAPDVYKVEQQ+KDRVNFVMLNVDNTKWEQELDEFGVEGIPHF FLDK
Sbjct: 89  EFYADWCEVCRELAPDVYKVEQQFKDRVNFVMLNVDNTKWEQELDEFGVEGIPHFAFLDK 148

Query: 466 EGNEEGNVVGRLPRKYLLENVDALAQGKASVPHARAVGQYTSAEARKVHRVTDPRSHG 293
           EGNEEGNVVGR PR+YLLENVDALA+GKASVPHAR VGQY+SAE+RKVH+V DPRSHG
Sbjct: 149 EGNEEGNVVGRFPRQYLLENVDALARGKASVPHARVVGQYSSAESRKVHQVVDPRSHG 206


>ref|XP_004141943.1| PREDICTED: thioredoxin-like protein HCF164, chloroplastic-like
            [Cucumis sativus] gi|449497723|ref|XP_004160496.1|
            PREDICTED: thioredoxin-like protein HCF164,
            chloroplastic-like [Cucumis sativus]
          Length = 259

 Score =  316 bits (810), Expect = 6e-84
 Identities = 166/260 (63%), Positives = 189/260 (72%), Gaps = 5/260 (1%)
 Frame = -3

Query: 1057 SNPINLNRFQPSFQASFP-----RRRSASLPRQKNIGGFRGNKLVCQTXXXXXXXXXXXX 893
            SN I L+R    F+   P       R  S PR       R   L CQT            
Sbjct: 7    SNSIALHRIPLCFRIPHPLLQPSAARFPSSPR-------RFPPLACQTLPESHDTTSAPE 59

Query: 892  XPVSVPDXXXXXXXXXXXXXXNAGSIEFPNRSINRKIALASTFAAVGLFLSTRLDFGVSL 713
               + P+              N G  EFPN+ INR++A+ ST +A+ LF S+RLDFGVSL
Sbjct: 60   KSSNGPESPGDTTGQAASSSSNQGFPEFPNKDINRRVAIVSTVSALALFSSSRLDFGVSL 119

Query: 712  KDLSVAALPYEEALSNGRPTVVEFYADWCEVCRELAPDVYKVEQQYKDRVNFVMLNVDNT 533
            KDL+ AALPYEEALSNG+PTVVEFYADWCEVCRELAPDVYKVEQQ+KDRVNFVMLNVDNT
Sbjct: 120  KDLAAAALPYEEALSNGKPTVVEFYADWCEVCRELAPDVYKVEQQFKDRVNFVMLNVDNT 179

Query: 532  KWEQELDEFGVEGIPHFTFLDKEGNEEGNVVGRLPRKYLLENVDALAQGKASVPHARAVG 353
            KWEQELDEFGVEGIPHF FLDK+GNEEGNVVGRLPR+YLLENVDALA+G+AS+PHAR VG
Sbjct: 180  KWEQELDEFGVEGIPHFAFLDKQGNEEGNVVGRLPRQYLLENVDALARGEASIPHARVVG 239

Query: 352  QYTSAEARKVHRVTDPRSHG 293
            Q++SAEARKVH+V+DPRSHG
Sbjct: 240  QFSSAEARKVHQVSDPRSHG 259


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