BLASTX nr result

ID: Coptis25_contig00016725 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00016725
         (892 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003631844.1| PREDICTED: uncharacterized protein LOC100853...   170   2e-58
ref|XP_003616106.1| Nibrin [Medicago truncatula] gi|355517441|gb...   157   1e-54
ref|XP_003544952.1| PREDICTED: uncharacterized protein LOC100783...   151   7e-53
ref|XP_002322496.1| predicted protein [Populus trichocarpa] gi|2...   135   4e-48
ref|XP_002882246.1| hypothetical protein ARALYDRAFT_477508 [Arab...   141   4e-46

>ref|XP_003631844.1| PREDICTED: uncharacterized protein LOC100853048 [Vitis vinifera]
           gi|296083807|emb|CBI24024.3| unnamed protein product
           [Vitis vinifera]
          Length = 595

 Score =  170 bits (431), Expect(2) = 2e-58
 Identities = 77/114 (67%), Positives = 94/114 (82%)
 Frame = -3

Query: 653 MVWGLFPVDSLPGDQRYYLFSKGTYTVGRKGCDVIVNTDKGVSRVHAEVVIDSMTWLDPL 474
           MVWGLFPVD L G+  YY+F+KGTY VGRKGCDVIV  DKGVSR+HAE+++DSM  LDP 
Sbjct: 1   MVWGLFPVDPLSGEDSYYIFAKGTYKVGRKGCDVIVKKDKGVSRIHAEIIVDSMISLDPQ 60

Query: 473 QRRSTSFSTNVRIKDCSKYGTFLNKKSGSKTKVGEYPNKEAPVKDEDLISFGTG 312
             +S++ S+NVRI+DCSKYGTF+NK  GSK K+ E+PNKE  +KD DL+SFGTG
Sbjct: 61  WNKSSNVSSNVRIRDCSKYGTFINKDLGSKEKLHEFPNKETTLKDGDLVSFGTG 114



 Score = 82.4 bits (202), Expect(2) = 2e-58
 Identities = 37/68 (54%), Positives = 51/68 (75%)
 Frame = -2

Query: 204 YGSKANRMECSLQEDVSSIGAGITHSWKEECTHVLVDESMPVKEDLLDAIVAQKPVVLKS 25
           Y S+  +M  SLQ+ +SSIGA +T +W  ECTHVLVD+ M VKEDL+D  +A+KP+VL  
Sbjct: 130 YRSEPFQMNHSLQDKISSIGASVTRAWSSECTHVLVDQFMLVKEDLVDIFLAKKPLVLND 189

Query: 24  WLKVIAEK 1
           W++ +AEK
Sbjct: 190 WIEFVAEK 197


>ref|XP_003616106.1| Nibrin [Medicago truncatula] gi|355517441|gb|AES99064.1| Nibrin
           [Medicago truncatula]
          Length = 571

 Score =  157 bits (398), Expect(2) = 1e-54
 Identities = 73/114 (64%), Positives = 89/114 (78%)
 Frame = -3

Query: 653 MVWGLFPVDSLPGDQRYYLFSKGTYTVGRKGCDVIVNTDKGVSRVHAEVVIDSMTWLDPL 474
           MVWGLFPVD L G+  YY+F  GTY VGRKGCDVIV  DKGVSRVHAE+V+++M  L+PL
Sbjct: 1   MVWGLFPVDPLSGEDNYYIFKPGTYKVGRKGCDVIVTKDKGVSRVHAEIVVNTMNMLNPL 60

Query: 473 QRRSTSFSTNVRIKDCSKYGTFLNKKSGSKTKVGEYPNKEAPVKDEDLISFGTG 312
           Q      S++V+I+DCSKYGTF++K  GSK KV E PNKE  ++D DL+SFGTG
Sbjct: 61  QNVRRHLSSSVQIRDCSKYGTFVSKNIGSKKKVHELPNKETALQDGDLVSFGTG 114



 Score = 82.8 bits (203), Expect(2) = 1e-54
 Identities = 38/64 (59%), Positives = 53/64 (82%)
 Frame = -2

Query: 192 ANRMECSLQEDVSSIGAGITHSWKEECTHVLVDESMPVKEDLLDAIVAQKPVVLKSWLKV 13
           +N+++ SL+E +SSIGA I+H+  EECTHVLVD+ MP+K+DL+DA VA+K  VLK+WL+ 
Sbjct: 132 SNQVDRSLEEKISSIGASISHTLNEECTHVLVDQLMPLKKDLVDAAVAKKSCVLKTWLEF 191

Query: 12  IAEK 1
            AEK
Sbjct: 192 FAEK 195


>ref|XP_003544952.1| PREDICTED: uncharacterized protein LOC100783205 [Glycine max]
          Length = 555

 Score =  151 bits (382), Expect(2) = 7e-53
 Identities = 66/114 (57%), Positives = 89/114 (78%)
 Frame = -3

Query: 653 MVWGLFPVDSLPGDQRYYLFSKGTYTVGRKGCDVIVNTDKGVSRVHAEVVIDSMTWLDPL 474
           MVWGLFPVD L G+ +YY+F  G Y VGRKGCDVI+  DKGVSRVHAE+V++++  ++PL
Sbjct: 1   MVWGLFPVDPLSGEDKYYIFKTGLYKVGRKGCDVIITKDKGVSRVHAEIVVNTVNPVNPL 60

Query: 473 QRRSTSFSTNVRIKDCSKYGTFLNKKSGSKTKVGEYPNKEAPVKDEDLISFGTG 312
             + +  S+++ I+DCSKYGTF+NK  G+K KV E PNKE  +++ DL+SFGTG
Sbjct: 61  PNKCSHLSSSIHIRDCSKYGTFINKNGGAKKKVHELPNKETALENGDLVSFGTG 114



 Score = 82.8 bits (203), Expect(2) = 7e-53
 Identities = 38/64 (59%), Positives = 53/64 (82%)
 Frame = -2

Query: 192 ANRMECSLQEDVSSIGAGITHSWKEECTHVLVDESMPVKEDLLDAIVAQKPVVLKSWLKV 13
           +N+++ SL+E +SSIGA ITH+  E CTHVLVD+ MP+K+DL+DA+VA+K  VLK+WL+ 
Sbjct: 132 SNKVDQSLEEKISSIGASITHTLGEGCTHVLVDQLMPLKKDLVDAVVAKKSCVLKNWLEF 191

Query: 12  IAEK 1
            AEK
Sbjct: 192 FAEK 195


>ref|XP_002322496.1| predicted protein [Populus trichocarpa] gi|222869492|gb|EEF06623.1|
           predicted protein [Populus trichocarpa]
          Length = 342

 Score =  135 bits (340), Expect(2) = 4e-48
 Identities = 63/114 (55%), Positives = 83/114 (72%)
 Frame = -3

Query: 653 MVWGLFPVDSLPGDQRYYLFSKGTYTVGRKGCDVIVNTDKGVSRVHAEVVIDSMTWLDPL 474
           MVWGLFPVD L G+ +YY+F+KG Y VGRKGCDVI+  DKGVSR+HAE+V+D M  +D  
Sbjct: 1   MVWGLFPVDPLSGEDKYYIFTKGVYKVGRKGCDVIICKDKGVSRIHAELVVDEMISMDHP 60

Query: 473 QRRSTSFSTNVRIKDCSKYGTFLNKKSGSKTKVGEYPNKEAPVKDEDLISFGTG 312
               +   + V I+DCSKYGT++NK+     KV ++ NKE  +KD D++SFGTG
Sbjct: 61  LHMKSDLPSRVLIRDCSKYGTYINKE-----KVHKFLNKETSLKDGDVVSFGTG 109



 Score = 83.2 bits (204), Expect(2) = 4e-48
 Identities = 39/68 (57%), Positives = 57/68 (83%)
 Frame = -2

Query: 204 YGSKANRMECSLQEDVSSIGAGITHSWKEECTHVLVDESMPVKEDLLDAIVAQKPVVLKS 25
           Y S++ +++  L++ VSSIGA IT++  EECTHVL DE MPVKE L+DAIV++KP+VL+S
Sbjct: 125 YCSESFQVDQLLRDKVSSIGACITYNLSEECTHVLADELMPVKEHLVDAIVSKKPIVLRS 184

Query: 24  WLKVIAEK 1
           W++++AEK
Sbjct: 185 WVELVAEK 192


>ref|XP_002882246.1| hypothetical protein ARALYDRAFT_477508 [Arabidopsis lyrata subsp.
           lyrata] gi|297328086|gb|EFH58505.1| hypothetical protein
           ARALYDRAFT_477508 [Arabidopsis lyrata subsp. lyrata]
          Length = 537

 Score =  141 bits (355), Expect(2) = 4e-46
 Identities = 66/114 (57%), Positives = 85/114 (74%)
 Frame = -3

Query: 653 MVWGLFPVDSLPGDQRYYLFSKGTYTVGRKGCDVIVNTDKGVSRVHAEVVIDSMTWLDPL 474
           MVWGLFPVD L G+ +YY+FSKG Y +GRKGCD+I+N DKGVSR+HAE+  DS +  D  
Sbjct: 1   MVWGLFPVDPLSGEDKYYIFSKGIYKIGRKGCDIIINKDKGVSRIHAELTFDSTSRRD-- 58

Query: 473 QRRSTSFSTNVRIKDCSKYGTFLNKKSGSKTKVGEYPNKEAPVKDEDLISFGTG 312
            + S + S  +R+KDCSKYGTF+    G+K KV E PNKE  ++D D+I+FGTG
Sbjct: 59  -KSSDTSSFVIRVKDCSKYGTFIKTDLGAKYKVHELPNKEKILQDGDVIAFGTG 111



 Score = 70.5 bits (171), Expect(2) = 4e-46
 Identities = 33/66 (50%), Positives = 52/66 (78%)
 Frame = -2

Query: 198 SKANRMECSLQEDVSSIGAGITHSWKEECTHVLVDESMPVKEDLLDAIVAQKPVVLKSWL 19
           S+  R++ S+Q+ VSSIGA I+ +  EECTHVL++  M V E L++AI+A+KP++L +W+
Sbjct: 130 SETFRVDQSVQDAVSSIGARISPTLSEECTHVLLEPRMQVNEALVNAILAKKPIILTNWV 189

Query: 18  KVIAEK 1
           K++AEK
Sbjct: 190 KLLAEK 195


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