BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00016723
         (1372 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003537614.1| PREDICTED: ATP-dependent RNA helicase SUPV3L...   630   e-178
ref|XP_003516752.1| PREDICTED: ATP-dependent RNA helicase SUPV3L...   623   e-176
ref|XP_002315757.1| predicted protein [Populus trichocarpa] gi|2...   622   e-176
ref|XP_002517095.1| ATP-dependent RNA and DNA helicase, putative...   604   e-170
ref|XP_003610757.1| ATP-dependent RNA helicase SUPV3L1 [Medicago...   601   e-169

>ref|XP_003537614.1| PREDICTED: ATP-dependent RNA helicase SUPV3L1, mitochondrial-like
            [Glycine max]
          Length = 565

 Score =  630 bits (1625), Expect = e-178
 Identities = 307/394 (77%), Positives = 347/394 (88%)
 Frame = -1

Query: 1369 TRGFSFTRALLGIPADELHLCGDPAVVPLIQEILGVTDDSIQVQYYERLLPLVPSKVPLG 1190
            TRG+SFTRALLGI ADELHLCGDPA VPLIQEI+ +T D I+VQ+YERL PLVP KVPLG
Sbjct: 170  TRGYSFTRALLGIAADELHLCGDPAAVPLIQEIMKITGDEIEVQFYERLSPLVPLKVPLG 229

Query: 1189 SFSNIKTGDCIVTFSRREIYRLKREIEERGKHLCSVVYGSLPPETRTRQATMFNDESSEF 1010
            SFSN++ GDCIVTFSR+EIY+LK+ IE+ GKHLCSVVYGSLPPETRTRQA+MFND SSEF
Sbjct: 230  SFSNVRNGDCIVTFSRQEIYKLKKRIEKEGKHLCSVVYGSLPPETRTRQASMFNDASSEF 289

Query: 1009 DVLVASDAIGMGLNLNISRIIFSTLKKFNGTEMRDLTVPEIKQIAGRAGRYGSKFPIGEV 830
            DVLVASDAIGMGLNLNISRIIFST+KKF+G E+RDLTVPEIKQIAGRAGRYGS FP+GEV
Sbjct: 290  DVLVASDAIGMGLNLNISRIIFSTMKKFDGFEVRDLTVPEIKQIAGRAGRYGSNFPVGEV 349

Query: 829  TCLDAEDIPFLHSSLKSPSPTLQSAGLFPTFDLLLLYSRLHPRTGLHPILARFLEKAKLS 650
            TC+D ED+P LHSSL SPSP L+ AG+ PTFDL+ +YSRLHPR G + ILA FL+ AKLS
Sbjct: 350  TCMDEEDLPLLHSSLNSPSPILERAGILPTFDLMYMYSRLHPRNGFYQILAHFLDNAKLS 409

Query: 649  PNYFIADCEEMLKVAAVIDELPLQLHDKYLFCISPVDMSDDISSQGLTQFAENYAKKGLV 470
             NYFI +CE++LKVAAVIDELPL LH+KYLFCISP DM D+ISSQGL QFAENYAKKGLV
Sbjct: 410  ENYFIVNCEQLLKVAAVIDELPLGLHEKYLFCISPADMDDEISSQGLAQFAENYAKKGLV 469

Query: 469  RLREIFTPGTLQVPKTQIGLQELESIHKVLDLYVWLSYRLEDSFPDRELAASQKSMCSLL 290
            RLREIFTPG+L+VPKT   L+ELESIHKVLDLYVWLS+RLE+SFPD ELAASQK++CS+L
Sbjct: 470  RLREIFTPGSLKVPKTPAALKELESIHKVLDLYVWLSFRLEESFPDHELAASQKAICSML 529

Query: 289  IEEFLERLGWQRPNKRRLSPRSGRRSVLEQQARR 188
            IEEFLERLGWQ+P  RRL       S+L Q  R+
Sbjct: 530  IEEFLERLGWQKPMARRLPSHKMSSSLLSQHMRK 563


>ref|XP_003516752.1| PREDICTED: ATP-dependent RNA helicase SUPV3L1, mitochondrial-like
            [Glycine max]
          Length = 600

 Score =  623 bits (1607), Expect = e-176
 Identities = 305/394 (77%), Positives = 345/394 (87%)
 Frame = -1

Query: 1369 TRGFSFTRALLGIPADELHLCGDPAVVPLIQEILGVTDDSIQVQYYERLLPLVPSKVPLG 1190
            TRG+SFTRALLGI ADELHLCGDPA VPLIQEIL +T D I+VQ+YERL PLVP  VPLG
Sbjct: 205  TRGYSFTRALLGIAADELHLCGDPAAVPLIQEILKITGDEIEVQFYERLSPLVPLNVPLG 264

Query: 1189 SFSNIKTGDCIVTFSRREIYRLKREIEERGKHLCSVVYGSLPPETRTRQATMFNDESSEF 1010
            SFSN++ GDCIVTFSR+EIY+LK+ IE+ GKHLCSVVYGSLPPETRTRQA+MFND SSEF
Sbjct: 265  SFSNVRNGDCIVTFSRQEIYKLKKRIEKEGKHLCSVVYGSLPPETRTRQASMFNDASSEF 324

Query: 1009 DVLVASDAIGMGLNLNISRIIFSTLKKFNGTEMRDLTVPEIKQIAGRAGRYGSKFPIGEV 830
            DVLVASDAIGMGLNLNISRIIFST+KKF+G E+RDL+VPEIKQIAGRAGRYGS FP+GEV
Sbjct: 325  DVLVASDAIGMGLNLNISRIIFSTMKKFDGFEVRDLSVPEIKQIAGRAGRYGSNFPVGEV 384

Query: 829  TCLDAEDIPFLHSSLKSPSPTLQSAGLFPTFDLLLLYSRLHPRTGLHPILARFLEKAKLS 650
            TC+D ED+  LHSSL SPSP L+ AGL PTFDL+ +YSRLHPR G + ILA FL+ AKLS
Sbjct: 385  TCMDEEDLLLLHSSLNSPSPILERAGLLPTFDLMYMYSRLHPRNGFYQILAHFLDHAKLS 444

Query: 649  PNYFIADCEEMLKVAAVIDELPLQLHDKYLFCISPVDMSDDISSQGLTQFAENYAKKGLV 470
             NYFI +CE++LKVAAVIDELPL LH+KYLFCISP DM D+ISSQGLTQFAENYAKKGLV
Sbjct: 445  ENYFIVNCEQLLKVAAVIDELPLGLHEKYLFCISPADMDDEISSQGLTQFAENYAKKGLV 504

Query: 469  RLREIFTPGTLQVPKTQIGLQELESIHKVLDLYVWLSYRLEDSFPDRELAASQKSMCSLL 290
            RLREIFTPG+L+VPKT   L+ELESIHKVLDLYVWLS+RLE+SFPD ELA SQK++CS+L
Sbjct: 505  RLREIFTPGSLKVPKTPAALKELESIHKVLDLYVWLSFRLEESFPDHELAVSQKAICSML 564

Query: 289  IEEFLERLGWQRPNKRRLSPRSGRRSVLEQQARR 188
            IEEFLERLGWQ+P  RRL+       +L Q  R+
Sbjct: 565  IEEFLERLGWQKPMARRLASHKMSSPLLSQHMRK 598


>ref|XP_002315757.1| predicted protein [Populus trichocarpa] gi|222864797|gb|EEF01928.1|
            predicted protein [Populus trichocarpa]
          Length = 571

 Score =  622 bits (1604), Expect = e-176
 Identities = 309/395 (78%), Positives = 346/395 (87%), Gaps = 1/395 (0%)
 Frame = -1

Query: 1369 TRGFSFTRALLGIPADELHLCGDPAVVPLIQEILGVTDDSIQVQYYERLLPLVPSKVPLG 1190
            TRGFSFTRALLGI ADELHLCGDPA VPLIQEIL  T D I VQYYERL PLVPS+ PLG
Sbjct: 175  TRGFSFTRALLGISADELHLCGDPAAVPLIQEILKPTGDDIHVQYYERLSPLVPSQKPLG 234

Query: 1189 SFSNIKTGDCIVTFSRREIYRLKREIEERGKHLCSVVYGSLPPETRTRQATMFNDESSEF 1010
            SF NI+TGDCIVTFSRREIY+LK +IE   KHLCSVVYGSLPPETRTRQATMFND SSEF
Sbjct: 235  SFKNIQTGDCIVTFSRREIYKLKGQIERGRKHLCSVVYGSLPPETRTRQATMFNDASSEF 294

Query: 1009 DVLVASDAIGMGLNLNISRIIFSTLKKFNGTEMRDLTVPEIKQIAGRAGRYGSKFPIGEV 830
            DVLVASDAIGMGLNLNISRIIFST+KKF+G EMRDLT+ E+KQIAGRAGRYGS FP+GEV
Sbjct: 295  DVLVASDAIGMGLNLNISRIIFSTMKKFDGVEMRDLTISEVKQIAGRAGRYGSDFPVGEV 354

Query: 829  TCLDAEDIPFLHSSLKSPSPTLQSAGLFPTFDLLLLYSRLHPRTGLHPILARFLEKAKLS 650
            TCL A+D+P LHSSLKSPSP L+ AGLFPTFDL+ +YSRLHP+ GL+ I+  FLE AKLS
Sbjct: 355  TCLHADDLPLLHSSLKSPSPILECAGLFPTFDLIFMYSRLHPKKGLYRIMEHFLENAKLS 414

Query: 649  PNYFIADCEEMLKVAAVIDELPLQLHDKYLFCISPVDMSDDISSQGLTQFAENYAKKGLV 470
             NYFIA+CEEMLKVAAV+D LP+ LHDKYLF ISPVDM ++ISSQGLTQFA+NYA+KG+V
Sbjct: 415  ENYFIANCEEMLKVAAVVDVLPISLHDKYLFVISPVDMRNEISSQGLTQFAQNYAQKGIV 474

Query: 469  RLREIFTPGTLQVPKTQIGLQELESIHKVLDLYVWLSYRLEDSFPDRELAASQKSMCSLL 290
            RL+EIFTPGTLQVPKT+  L+ELESIHKVLDLYVWLS+RLEDSFPDRELAASQK++C LL
Sbjct: 475  RLKEIFTPGTLQVPKTESALKELESIHKVLDLYVWLSFRLEDSFPDRELAASQKAICGLL 534

Query: 289  IEEFLERLGWQR-PNKRRLSPRSGRRSVLEQQARR 188
            IEEFLER GWQ+ P  R+L  R     +L ++ R+
Sbjct: 535  IEEFLERFGWQKQPKTRKLPSRVNSGFLLSKETRQ 569


>ref|XP_002517095.1| ATP-dependent RNA and DNA helicase, putative [Ricinus communis]
            gi|223543730|gb|EEF45258.1| ATP-dependent RNA and DNA
            helicase, putative [Ricinus communis]
          Length = 547

 Score =  604 bits (1557), Expect = e-170
 Identities = 305/395 (77%), Positives = 337/395 (85%)
 Frame = -1

Query: 1372 RTRGFSFTRALLGIPADELHLCGDPAVVPLIQEILGVTDDSIQVQYYERLLPLVPSKVPL 1193
            +TRGFSFTRALLGI ADELHLCGDPA VPLIQEIL VT D                    
Sbjct: 175  KTRGFSFTRALLGISADELHLCGDPAAVPLIQEILKVTGD-------------------- 214

Query: 1192 GSFSNIKTGDCIVTFSRREIYRLKREIEERGKHLCSVVYGSLPPETRTRQATMFNDESSE 1013
                +IKTGDCIVTFSRREIYRLK+ IE  GKHLCSVVYGSLPPETRTRQATMFND SSE
Sbjct: 215  ----DIKTGDCIVTFSRREIYRLKKIIESAGKHLCSVVYGSLPPETRTRQATMFNDASSE 270

Query: 1012 FDVLVASDAIGMGLNLNISRIIFSTLKKFNGTEMRDLTVPEIKQIAGRAGRYGSKFPIGE 833
            FDVLVASDAIGMGLNLNISRIIFST+KKF+G EMR LTVPEIKQIAGRAGRYGS +P GE
Sbjct: 271  FDVLVASDAIGMGLNLNISRIIFSTMKKFDGVEMRYLTVPEIKQIAGRAGRYGSNYPAGE 330

Query: 832  VTCLDAEDIPFLHSSLKSPSPTLQSAGLFPTFDLLLLYSRLHPRTGLHPILARFLEKAKL 653
            VTCLDA+D+  LHSSL+SPSP L+SAGLFPTFDL+ +YSRLHP+ GL+ IL  F+E AKL
Sbjct: 331  VTCLDADDLSLLHSSLESPSPALESAGLFPTFDLMFMYSRLHPKKGLYQILEHFVENAKL 390

Query: 652  SPNYFIADCEEMLKVAAVIDELPLQLHDKYLFCISPVDMSDDISSQGLTQFAENYAKKGL 473
            SPNYFIADCEE+LKVAAVIDE+PL L+DKYLFCISPVDM+D+ISSQGLTQFAENYAKKG+
Sbjct: 391  SPNYFIADCEEVLKVAAVIDEMPLSLNDKYLFCISPVDMNDEISSQGLTQFAENYAKKGI 450

Query: 472  VRLREIFTPGTLQVPKTQIGLQELESIHKVLDLYVWLSYRLEDSFPDRELAASQKSMCSL 293
            VRL+EIFTPGTLQVPKTQ  L+ELES+HKVLDLYVWLSYRLEDSFPDRELAASQK++CSL
Sbjct: 451  VRLKEIFTPGTLQVPKTQTALKELESVHKVLDLYVWLSYRLEDSFPDRELAASQKAICSL 510

Query: 292  LIEEFLERLGWQRPNKRRLSPRSGRRSVLEQQARR 188
            LIEEFLERLGWQ+P   +LS R+   S+L +  R+
Sbjct: 511  LIEEFLERLGWQKPRTTKLSSRNKTSSLLSKDIRQ 545


>ref|XP_003610757.1| ATP-dependent RNA helicase SUPV3L1 [Medicago truncatula]
            gi|355512092|gb|AES93715.1| ATP-dependent RNA helicase
            SUPV3L1 [Medicago truncatula]
          Length = 570

 Score =  601 bits (1550), Expect = e-169
 Identities = 290/394 (73%), Positives = 338/394 (85%)
 Frame = -1

Query: 1369 TRGFSFTRALLGIPADELHLCGDPAVVPLIQEILGVTDDSIQVQYYERLLPLVPSKVPLG 1190
            TRG+SFTRALLGI ADELHLCGDPA VPLIQEIL +T D ++VQYYERL PLVP KVPL 
Sbjct: 175  TRGYSFTRALLGIAADELHLCGDPAAVPLIQEILDITGDELEVQYYERLSPLVPMKVPLR 234

Query: 1189 SFSNIKTGDCIVTFSRREIYRLKREIEERGKHLCSVVYGSLPPETRTRQATMFNDESSEF 1010
            S S+++ GDCIVTFSRR+IY+LK+ IE  GKHLCSVVYGSLPPETRTRQA+MFND SSEF
Sbjct: 235  SLSDVRNGDCIVTFSRRDIYKLKKRIEREGKHLCSVVYGSLPPETRTRQASMFNDASSEF 294

Query: 1009 DVLVASDAIGMGLNLNISRIIFSTLKKFNGTEMRDLTVPEIKQIAGRAGRYGSKFPIGEV 830
            DVLVASDAIGMGLNLNISRIIFST++KF+G +MRDLTVPEIKQIAGRAGRYGS FP+GEV
Sbjct: 295  DVLVASDAIGMGLNLNISRIIFSTMQKFDGFQMRDLTVPEIKQIAGRAGRYGSNFPLGEV 354

Query: 829  TCLDAEDIPFLHSSLKSPSPTLQSAGLFPTFDLLLLYSRLHPRTGLHPILARFLEKAKLS 650
            TC+  +D+P LHS+L SPSP L+ AGL P+++LL +YSRLHP+ G + +L  F++ AKLS
Sbjct: 355  TCMSGDDLPLLHSALDSPSPILERAGLLPSYELLYMYSRLHPQAGFYQVLEHFVDNAKLS 414

Query: 649  PNYFIADCEEMLKVAAVIDELPLQLHDKYLFCISPVDMSDDISSQGLTQFAENYAKKGLV 470
              YFI +C+++LKVAAV+DE PL+L DKYLFCISP DM D+ISSQGLTQF ENYAKKGLV
Sbjct: 415  EKYFIVNCDQVLKVAAVVDEFPLELRDKYLFCISPADMDDEISSQGLTQFVENYAKKGLV 474

Query: 469  RLREIFTPGTLQVPKTQIGLQELESIHKVLDLYVWLSYRLEDSFPDRELAASQKSMCSLL 290
            RLREIFTPGTL+VP T   L++LESIHKVLDLYVWLS+RLEDSFPD ELA SQK++CS+L
Sbjct: 475  RLREIFTPGTLKVPTTPQALKDLESIHKVLDLYVWLSFRLEDSFPDHELAKSQKALCSML 534

Query: 289  IEEFLERLGWQRPNKRRLSPRSGRRSVLEQQARR 188
            IEEFL+R GWQ+P  RRL  R    S+L Q  R+
Sbjct: 535  IEEFLDRYGWQKPMARRLPLRKVSNSLLSQNLRQ 568